124 research outputs found
Geological and thermal control of the hydrothermal system in northern Yellowstone Lake: inferences from high-resolution magnetic surveys
Author Posting. © American Geophysical Union, 2020. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Solid Earth 125(9), (2020): e2020JB019743, doi:10.1029/2020JB019743.A multiscale magnetic survey of the northern basin of Yellowstone Lake was undertaken in 2016 as part of the Hydrothermal Dynamics of Yellowstone Lake Project (HDâYLAKE)âa broad research effort to characterize the causeâandâeffect relationships between geologic and environmental processes and hydrothermal activity on the lake floor. The magnetic survey includes lake surface, regional aeromagnetic, and nearâbottom autonomous underwater vehicle (AUV) data. The study reveals a strong contrast between the northeastern lake basin, characterized by a regional magnetic low punctuated by stronger local magnetic lows, many of which host hydrothermal vent activity, and the northwestern lake basin with higherâamplitude magnetic anomalies and no obvious hydrothermal activity or punctuated magnetic lows. The boundary between these two regions is marked by a steep gradient in heat flow and magnetic values, likely reflecting a significant structure within the currently active ~20âkmâlong Eagle BayâLake Hotel fault zone that may be related to the ~2.08âMa Huckleberry Ridge caldera rim. Modeling suggests that the broad northeastern magnetic low reflects both a shallower Curie isotherm and widespread hydrothermal activity that has demagnetized the rock. Along the western lake shoreline are sinuousâshaped, highâamplitude magnetic anomaly highs, interpreted as lava flow fronts of upper units of the West Thumb rhyolite. The AUV magnetic survey shows decreased magnetization at the periphery of the active Deep Hole hydrothermal vent. We postulate that lower magnetization in the outer zone results from enhanced hydrothermal alteration of rhyolite by hydrothermal condensates while the vaporâdominated center of the vent is less altered.The lake surface and AUV magnetic data were acquired under National Park Service research permit YELLâ2016âSCIâ7018 and the 2016 aeromagnetic data under research permit YELLâ2016âSCIâ7056. We thank Sarah Haas, Stacey Gunther, Erik Oberg, Annie Carlson, and Patricia Bigelow at the Yellowstone Center for Resources for assistance with permitting and logistics, Ranger Jackie Sene for assistance with logistics and safety at Bridge Bay, Bob Gresswell for providing us with the U.S. Geological Survey (USGS) boat Alamar, the boat pilot Nick Heredia, and Robert Harris and Shaul Hurwitz for fruitful discussions. We are very thankful to Ocean Floor Geophysics (Brian Claus and Steve Bloomer) who provided the magnetometer for the AUV survey and preprocessed the data, and to the REMUS 600 team (Greg Packard and Greg Kurras) for operating and optimizing the AUV during lake operations. Data from the Newport and Boulder observatories were used to process the survey data. We thank the USGS Geomagnetism Program for supporting their operation and INTERMAGNET for promoting high standards of magnetic observatory practice (www.intermagnet.org). This research was funded by the National Science Foundation's Integrated Earth Systems program EARâ1516361 (HDâYLAKE project), USGS Mineral Resource and Volcano Hazard Programs, and benefited from major inâkind support from the USGS Yellowstone Volcano Observatory. Maurice Tivey was supported under National Science Foundation Grant OCEâ1557455. During the course of this study, Claire Bouligand was a visiting scientist at the USGS in Menlo Park, California, USA, benefited from a delegation to Centre National de la Recherche Scientifique (CNRS), and received funding from CNRSâINSU program SYSTER. ISTerre is part of Labex OSUG@2020 (ANR10 LABX56). Any use of trade, firm, or product names is for descriptive purposes and does not imply endorsement by the U.S. Government.2021-01-2
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Subglacial sediments: A regional geological template for ice flow in West Antarctica
We use aerogeophysical data to estimate the distribution of marine subglacial sediments and faultâbounded sedimentary basins beneath the West Antarctic Ice Sheet (WAIS). We find that significant ice flow occurs exclusively in regions covered by subglacial sediments. The onsets and lateral margins of ice streams coincide with the limit of marine sediments. Lateral margins are also consistently linked with faultâbounded basins. We predict that the inland migration of ice streams B and C 1 towards the ice divide outside the region covered by marine or rift sediments is unlikely. The subglacial geology has the potential to modulate the dynamic evolution of the ice streams and the WAIS
The Floor of Yellowstone Lake is Anything but QuietâNew Discoveries from High-Resolution Sonar Imaging, Seismic- Reflection Profiling, and Submersible Studies
Discoveries from multibeam sonar mapping and seis-mic-reflection surveys of Yellowstone Lake provide new insight into the recent geologic forces that have shaped a large lake at the active front of the Yellowstone hot spot, a region strongly affected by young (\u3c2 \u3em.y.), large-volume (\u3e100â1,000s km3) silicic volcanism, active tectonism, and accompanying uplift.
Specifically, our mapping has identified the extent of postcaldera-collapse volcanism and active hydrothermal processes occurring above a large magma chamber beneath the lake floor. Multiple advances and recessions of thick glacial ice have overlapped volcanic and hydrothermal activity leaving a lake basin that has been shaped predominantly by fire and ice. Yellowstone Lake has an irregular bottom covered with dozens of features directly related to hydrothermal, tectonic, volcanic,and sedimentary processes. Detailed bathymetric, seismic-reflection, and magnetic evidence reveals that rhyolitic lava flows underlie much of Yellowstone Lake and exert fundamental control on lake morphology and localization of hydrothermal activity in the northern, West Thumb, and central basins. Many previously unknown features have been identified and include more than 660 hydrothermal vents, several very large (\u3e500-m diameter) hydrothermal-explosion craters, many small hydrothermal-vent craters (~1-to 200-m diameter), domed lacustrine sediments related to hydrothermal activity, elongate fissures cutting postglacial sediments, siliceous hydrothermal-spire structures, sublacustrine landslide deposits, submerged former shorelines, large glacial melting features, incipient faulting along the trace of the Eagle Bay fault zone, and a recently active graben. Sampling and observations with a submersible remotely operated vehicle confirm and extend our understanding of the identified features. Faults, fissures, hydrothermally inflated domal structures, hydrothermal-explosion craters, and sublacustrine landslides constitute potentially significant geologic hazards. Toxic elements derived from hydrothermal processes also may significantly affect the Yellowstone ecosystem
The Floor of Yellowstone Lake is Anything but QuietâNew Discoveries from High-Resolution Sonar Imaging, Seismic- Reflection Profiling, and Submersible Studies
Discoveries from multibeam sonar mapping and seis-mic-reflection surveys of Yellowstone Lake provide new insight into the recent geologic forces that have shaped a large lake at the active front of the Yellowstone hot spot, a region strongly affected by young (\u3c2 \u3em.y.), large-volume (\u3e100â1,000s km3) silicic volcanism, active tectonism, and accompanying uplift.
Specifically, our mapping has identified the extent of postcaldera-collapse volcanism and active hydrothermal processes occurring above a large magma chamber beneath the lake floor. Multiple advances and recessions of thick glacial ice have overlapped volcanic and hydrothermal activity leaving a lake basin that has been shaped predominantly by fire and ice. Yellowstone Lake has an irregular bottom covered with dozens of features directly related to hydrothermal, tectonic, volcanic,and sedimentary processes. Detailed bathymetric, seismic-reflection, and magnetic evidence reveals that rhyolitic lava flows underlie much of Yellowstone Lake and exert fundamental control on lake morphology and localization of hydrothermal activity in the northern, West Thumb, and central basins. Many previously unknown features have been identified and include more than 660 hydrothermal vents, several very large (\u3e500-m diameter) hydrothermal-explosion craters, many small hydrothermal-vent craters (~1-to 200-m diameter), domed lacustrine sediments related to hydrothermal activity, elongate fissures cutting postglacial sediments, siliceous hydrothermal-spire structures, sublacustrine landslide deposits, submerged former shorelines, large glacial melting features, incipient faulting along the trace of the Eagle Bay fault zone, and a recently active graben. Sampling and observations with a submersible remotely operated vehicle confirm and extend our understanding of the identified features. Faults, fissures, hydrothermally inflated domal structures, hydrothermal-explosion craters, and sublacustrine landslides constitute potentially significant geologic hazards. Toxic elements derived from hydrothermal processes also may significantly affect the Yellowstone ecosystem
Revealing the crustal architecture of the least understood composite craton on Earth: East Antarctica
East Antarctica hosts one of the largest Precambrian cratons on Earth. Meager coastal exposures and sediment provenance studies provide glimpses into up to 3 billion years of its geological history. Extensive ice sheet cover hampers however our knowledge of crustal architecture, and consequently the geodynamic processes responsible for the growth and amalgamation of East Antarctica have remained elusive. Here we exploit recent aerogeophysical exploration efforts to help unveil the large-scale crustal architecture of East Antarctica. We focus on three sectors of East Antarctica: the Transantarctic Mountains and Wilkes Basin area; the Recovery/Dronning Maud Land area and the Gamburtsev Province. These areas provide new insights into both the margins of the so called Mawson craton and the processes that affected its interior. A 1,900 km-long linear magnetic and gravity boundary is imaged along the western flank of the Wilkes Basin and interpreted here as a crustal-scale Paleoproterozoic suture zone (ca 1.7 Ga) that inverted a former passive margin. Two ribbon-like Archean and Paleoproterozic microcontinents were assembled during this stage, resembling modes of amalgamation of Paleoproterozoic microcontinental ribbons in Australia. The proposed Proterozoic sutures and microcontinent boundaries also influenced Neoproterozoic rifted margin and early Cambrian back-arc basins in the Wilkes Basin/Transantarctic Mountains region. In the Recovery/Dronning Maud Land region our new potential field compilations reveal a wide tract of anastomising crustal-scale shear zones, likely of Pan-African age that flank and variably deform the margins of several distinct Archean, Paleo-Mesoproterozoic and Grenvillian age crustal blocks. In the Gamburtsev Province new magnetic and gravity models provide insights into the Gamburtsev Suture (Ferraccioli et al., 2011, Nature) that separates the Ruker Province from an inferred Grenvillian-age orogenic Gamburtsev Province with remarkably thick crust (up to 60 km thick) and thick lithosphere (over 200 km thick). We suggest that a recently inferred Tonian-age accretionary belt identified in the Sor Rondane region continues further inland in the Gamburtsev Province and was likely also reactivated during Pan-African age transpression linked to Gondwana assembly
New Views of East Antarctica- from Columbia to Gondwana
East Antarctica is a keystone in the Gondwana, Rodinia and the Columbia supercontinents. Recent aerogeophysical research, augmented by satellite magnetic, gravity and seismological data is unveiling the crustal architecture of the continent. This is helping comprehend the impact of supercontinental processes such as subduction, accretion, rifting and intraplate tectonics on its evolution. A mosaic of Precambrian basement provinces is apparent in interior East Antarctica (Ferraccioli et al., 2011, Nature). A major suture separates the Archean-Neoproterozoic Ruker Province from an inferred Grenvillian-age orogenic Gamburtsev Province with remarkably thick crust (up to 60 km thick) and thick lithosphere (over 200 km thick). The age of the suturing and its linkages with supercontinental assembly is debated with both Rodinia and Gondwana candidates being proposed. Further east, magnetic highs delineate a Paleo to Mesoproterozoic Nimrod-South Pole igneous province (Goodge and Finn, 2010 JGR) that flanks a composite Mawson Continent- including the Gawler Craton of South Australia (Aitken et al., 2014 GRL). An over 1,900 km long magnetic and gravity lineament is imaged along the western flank of the Wilkes Subglacial Basin and is interpreted here as a major Paleoproterozoic suture zone linked to the collision of Laurentia and East Antarctica within Columbia. The proposed suture played a pivotal role helping localise Neoproterozoic Rodinia rifted margin evolution and forming a backstop for the Ross-Delamerian cycle of Gondwana amalgamation. Aeromagnetic and gravity imaging help determine the extent of a Keweenawan-age (ca 1.1 Ga) large igneous province in the Coats Land Block -isotopically tied with the Mid-Continent Rift System of Laurentia (Loewy et al., 2011 Geology). Imprints of Grenvillian magmatic arc accretion link together the Namaqua-Natal and Maud belts in South Africa and Dronning Maud Land within Rodinia. The aeromagnetically distinct Southeast Dronning Maud Land province (Mieth and Jokat, 2014 GR) may represent a separate 1000-900 Ma Oceanic Arc Superterrane (Jacobs et al., 2015 Prec. Res.). New geophysical views of the Shackleton Range suture lend weight to more complex collisional and indentation tectonic models for the Pan-African age assembly of Gondwan
The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.
Proteins that contain the DUF2874 domain constitute a new Pfam family PF11396. Members of this family have predominantly been identified in microbes found in the human gut and oral cavity. The crystal structure of one member of this family, BVU2987 from Bacteroides vulgatus, has been determined, revealing a ÎČ-lactamase inhibitor protein-like structure with a tandem repeat of domains. Sequence analysis and structural comparisons reveal that BVU2987 and other DUF2874 proteins are related to ÎČ-lactamase inhibitor protein, PepSY and SmpA_OmlA proteins and hence are likely to function as inhibitory proteins
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Air and shipborne magnetic surveys of the Antarctic into the 21st century
The Antarctic geomagnetics' community remains very active in crustal anomaly mapping. More than 1.5 million line-km of new air- and shipborne data have been acquired over the past decade by the international community in Antarctica. These new data together with surveys that previously were not in the public domain significantly upgrade the ADMAP compilation. Aeromagnetic flights over East Antarctica have been concentrated in the Transantarctic Mountains, the Prince Charles Mountains â Lambert Glacier area, and western Dronning Maud Land (DML) â Coats Land. Additionally, surveys were conducted over Lake Vostok and the western part of Marie Byrd Land by the US Support Office for Aerogeophysical Research projects and over the Amundsen Sea Embayment during the austral summer of 2004/2005 by a collaborative US/UK aerogeophysical campaign. New aeromagnetic data over the Gamburtsev Subglacial Mountains (120,000 line-km), acquired within the IPY Antarctica's Gamburtsev Province project reveal fundamental geologic features beneath the East Antarctic Ice sheet critical to understanding Precambrian continental growth processes. Roughly 100,000 line-km of magnetic data obtained within the International Collaboration for Exploration of the Cryosphere through Aerogeophysical Profiling promises to shed light on subglacial lithology and identify crustal boundaries for the central Antarctic Plate. Since the 1996/97 season, the Alfred Wegener Institute has collected 90,000 km of aeromagnetic data along a 1200 km long segment of the East Antarctic coast over western DML. Recent cruises by Australian, German, Japanese, Russian, British, and American researchers have contributed to long-standing studies of the Antarctic continental margin. Along the continental margin of East Antarctica west of Maud Rise to the George V Coast of Victoria Land, the Russian Polar Marine Geological Research Expedition and Geoscience Australia obtained 80,000 and 20,000 line-km, respectively, of integrated seismic, gravity and magnetic data. Additionally, US expeditions collected 128,000 line-km of shipborne magnetic data in the Ross Sea sector
Risk factors and prognostic implications of diagnosis of cancer within 30 days after an emergency hospital admission (emergency presentation): an International Cancer Benchmarking Partnership (ICBP) population-based study
BACKGROUND: Greater understanding of international cancer survival differences is needed. We aimed to identify predictors and consequences of cancer diagnosis through emergency presentation in different international jurisdictions in six high-income countries. METHODS: Using a federated analysis model, in this cross-sectional population-based study, we analysed cancer registration and linked hospital admissions data from 14 jurisdictions in six countries (Australia, Canada, Denmark, New Zealand, Norway, and the UK), including patients with primary diagnosis of invasive oesophageal, stomach, colon, rectal, liver, pancreatic, lung, or ovarian cancer during study periods from Jan 1, 2012, to Dec 31, 2017. Data were collected on cancer site, age group, sex, year of diagnosis, and stage at diagnosis. Emergency presentation was defined as diagnosis of cancer within 30 days after an emergency hospital admission. Using logistic regression, we examined variables associated with emergency presentation and associations between emergency presentation and short-term mortality. We meta-analysed estimates across jurisdictions and explored jurisdiction-level associations between cancer survival and the percentage of patients diagnosed as emergencies. FINDINGS: In 857 068 patients across 14 jurisdictions, considering all of the eight cancer sites together, the percentage of diagnoses through emergency presentation ranged from 24·0% (9165 of 38â212 patients) to 42·5% (12â238 of 28â794 patients). There was consistently large variation in the percentage of emergency presentations by cancer site across jurisdictions. Pancreatic cancer diagnoses had the highest percentage of emergency presentations on average overall (46·1% [30â972 of 67â173 patients]), with the jurisdictional range being 34·1% (1083 of 3172 patients) to 60·4% (1317 of 2182 patients). Rectal cancer had the lowest percentage of emergency presentations on average overall (12·1% [10â051 of 83â325 patients]), with a jurisdictional range of 9·1% (403 of 4438 patients) to 19·8% (643 of 3247 patients). Across the jurisdictions, older age (ie, 75-84 years and 85 years or older, compared with younger patients) and advanced stage at diagnosis compared with non-advanced stage were consistently associated with increased emergency presentation risk, with the percentage of emergency presentations being highest in the oldest age group (85 years or older) for 110 (98%) of 112 jurisdiction-cancer site strata, and in the most advanced (distant spread) stage category for 98 (97%) of 101 jurisdiction-cancer site strata with available information. Across the jurisdictions, and despite heterogeneity in association size (I2=93%), emergency presenters consistently had substantially greater risk of 12-month mortality than non-emergency presenters (odds ratio >1·9 for 112 [100%] of 112 jurisdiction-cancer site strata, with the minimum lower bound of the related 95% CIs being 1·26). There were negative associations between jurisdiction-level percentage of emergency presentations and jurisdiction-level 1-year survival for colon, stomach, lung, liver, pancreatic, and ovarian cancer, with a 10% increase in percentage of emergency presentations in a jurisdiction being associated with a decrease in 1-year net survival of between 2·5% (95% CI 0·28-4·7) and 7·0% (1·2-13·0). INTERPRETATION: Internationally, notable proportions of patients with cancer are diagnosed through emergency presentation. Specific types of cancer, older age, and advanced stage at diagnosis are consistently associated with an increased risk of emergency presentation, which strongly predicts worse prognosis and probably contributes to international differences in cancer survival. Monitoring emergency presentations, and identifying and acting on contributing behavioural and health-care factors, is a global priority for cancer control. FUNDING: Canadian Partnership Against Cancer; Cancer Council Victoria; Cancer Institute New South Wales; Cancer Research UK; Danish Cancer Society; National Cancer Registry Ireland; The Cancer Society of New Zealand; National Health Service England; Norwegian Cancer Society; Public Health Agency Northern Ireland, on behalf of the Northern Ireland Cancer Registry; the Scottish Government; Western Australia Department of Health; and Wales Cancer Network
Structure and Function of the First Full-Length Murein Peptide Ligase (Mpl) Cell Wall Recycling Protein
Bacterial cell walls contain peptidoglycan, an essential polymer made by enzymes in the Mur pathway. These proteins are specific to bacteria, which make them targets for drug discovery. MurC, MurD, MurE and MurF catalyze the synthesis of the peptidoglycan precursor UDP-N-acetylmuramoyl-L-alanyl-Îł-D-glutamyl-meso-diaminopimelyl-D-alanyl-D-alanine by the sequential addition of amino acids onto UDP-N-acetylmuramic acid (UDP-MurNAc). MurC-F enzymes have been extensively studied by biochemistry and X-ray crystallography. In Gram-negative bacteria, âŒ30â60% of the bacterial cell wall is recycled during each generation. Part of this recycling process involves the murein peptide ligase (Mpl), which attaches the breakdown product, the tripeptide L-alanyl-Îł-D-glutamyl-meso-diaminopimelate, to UDP-MurNAc. We present the crystal structure at 1.65 Ă
resolution of a full-length Mpl from the permafrost bacterium Psychrobacter arcticus 273-4 (PaMpl). Although the Mpl structure has similarities to Mur enzymes, it has unique sequence and structure features that are likely related to its role in cell wall recycling, a function that differentiates it from the MurC-F enzymes. We have analyzed the sequence-structure relationships that are unique to Mpl proteins and compared them to MurC-F ligases. We have also characterized the biochemical properties of this enzyme (optimal temperature, pH and magnesium binding profiles and kinetic parameters). Although the structure does not contain any bound substrates, we have identified âŒ30 residues that are likely to be important for recognition of the tripeptide and UDP-MurNAc substrates, as well as features that are unique to Psychrobacter Mpl proteins. These results provide the basis for future mutational studies for more extensive function characterization of the Mpl sequence-structure relationships
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