The Sub-Surface Structure of a Large Sample of Active Regions

We employ ring-diagram analysis to study the sub-surface thermal structure of active regions. We present results using a large number of active regions over the course of Solar Cycle 23. We present both traditional inversions of ring-diagram frequency differences, with a total sample size of 264, and a statistical study using Principal Component Analysis. We confirm earlier results on smaller samples that sound speed and adiabatic index are changed below regions of strong magnetic field. We find that sound speed is decreased in the region between approximately r=0.99R_sun and r=0.995R_sun (depths of 3Mm to 7Mm), and increased in the region between r=0.97R_sun and r=0.985R_sun (depths of 11Mm to 21Mm). The adiabatic index is enhanced in the same deeper layers that sound-speed enhancement is seen. A weak decrease in adiabatic index is seen in the shallower layers in many active regions. We find that the magnitudes of these perturbations depend on the strength of the surface magnetic field, but we find a great deal of scatter in this relation, implying other factors may be relevant.Comment: 16 pages, 11 figures, accepted for publication in Solar Physic

Exchange and correlation effects on drag in low density electron bilayers: Coulomb and virtual-optical-phonon-mediated electron-electron interaction

We investigate the effect of exchange and correlation (xc) in low-density electron bilayers. Along with the direct Coulomb interaction, the effective electron-electron interaction mediated by the exchange of virtual polar optical (PO) phonons is considered. We find that the introduction of xc corrections results in a significant enhancement of the transresistivity and qualitative changes in its temperature dependence. The virtual PO-phonon contribution behaves similarly to the Coulomb drag and reduces noticeably the total drag thereby resulting in a better agreement with the recent experimental findings.Comment: 5 pages, 4 figures, Int. Conf. EP2DS-1

Flavor Democracy in Standard Models at High Energies

It is possible that the standard model (SM) is replaced around some transition energy \E_{tr} by a new, possibly Higgsless, ``flavor gauge theory'' such that the Yukawa (running) parameters of SM at E \sim \E_{tr} show up an (approximate) flavor democracy (FD). We investigate the latter possibility by studying the renormalization group equations for the Yukawa couplings of SM with one and two Higgs doublets, by evolving them from given physical values at low energies ($E \simeq 1 GeV$) to \E_{tr} ( \sim \E_{pole}) and comparing the resulting fermion masses and CKM matrix elements at E \simeq \E_{tr} for various $m_t^{phy}$ and ratios $v_u/v_d$ of vacuum expectation values. We find that the minimal SM and the closely related SM with two Higgs doublets (type I) show increasing deviation from FD when energy is increased, but that SM with two Higgs doublets (type II) clearly tends to FD with increasing energy - in both the quark and the leptonic sector (q-q and l-l FD). Furthermore, we find within the type II model that, for \E_{pole} \ll \E_{Planck}, $m_t^{phy}$ can be less than $200 GeV$ in most cases of chosen $v_u/v_d$. Under the assumption that also the corresponding Yukawa couplings in the quark and the leptonic sector at E \simeq \E_{tr} are equal (l-q FD), we derive estimates of bounds on masses of top quark and tau-neutrino, which are compatible with experimental bounds.Comment: 23 pages (7 Figs. available on request), standard LATEX, preprint DO-TH 93-08, SNUTP 93-12, YUMS 93-0

The rare top quark decays t→cVt\to cV in the topcolor-assisted technicolor model

We consider the rare top quark decays in the framework of topcolor-assisted technicolor (TC2) model. We find that the contributions of top-pions and top-Higgs predicted by the TC2 model can enhance the SM branching ratios by as much as 6-9 orders of magnitude. i.e., in the most case, the orders of magnitude of branching ratios are $Br(t\to c g)\sim 10^{-5}$, $Br(t\to c Z)\sim 10^{-5}$, $Br(t\to c \gamma)\sim 10^{-7}$. With the reasonable values of the parameters in TC2 model, such rare top quark decays may be testable in the future experiments. So, rare top quark decays provide us a unique way to test TC2 model.Comment: 14 pages, 4 figure

Supersymmetric effects in top quark decay into polarized W-boson

We investigate the one-loop supersymmetric QCD (SUSY-QCD) and electroweak (SUSY-EW) corrections to the top quark decay into a b-quark and a longitudinal or transverse W-boson. The corrections are presented in terms of the longitudinal ratio \Gamma(t-->W_L b)/\Gamma(t--> W b) and the transverse ratio \Gamma(t-->W_- b)/\Gamma(t--> W b). In most of the parameter space, both SUSY-QCD and SUSY-EW corrections to these ratios are found to be less than 1% in magnitude and they tend to have opposite signs. The corrections to the total width \Gamma(t-->W b) are also presented for comparison with the existing results in the literature. We find that our SUSY-EW corrections to the total width differ significantly from previous studies: the previous studies give a large correction of more than 10% in magnitude for a large part of the parameter space while our results reach only few percent at most.Comment: Version in PRD (explanation and refs added

Subsurface Flows in and Around Active Regions with Rotating and Non-rotating Sunspots

The temporal variation of the horizontal velocity in subsurface layers beneath three different types of active regions is studied using the technique of ring diagrams. In this study, we select active regions (ARs) 10923, 10930, 10935 from three consecutive Carrington rotations: AR 10930 contains a fast-rotating sunspot in a strong emerging active region while other two have non-rotating sunspots with emerging flux in AR 10923 and decaying flux in AR 10935. The depth range covered is from the surface to about 12 Mm. In order to minimize the influence of systematic effects, the selection of active and quiet regions is made so that these were observed at the same heliographic locations on the solar disk. We find a significant variation in both components of the horizontal velocity in active regions as compared to quiet regions. The magnitude is higher in emerging-flux regions than in the decaying-flux region, in agreement with earlier findings. Further, we clearly see a significant temporal variation in depth profiles of both zonal and meridional flow components in AR 10930, with the variation in the zonal component being more pronounced. We also notice a significant influence of the plasma motion in areas closest to the rotating sunspot in AR 10930 while areas surrounding the non-rotating sunspots in all three cases are least affected by the presence of the active region in their neighborhood.Comment: Solar Physics (in press), includes 11 figure

Unique Molecular Identifiers and Multiplexing Amplicons Maximize the Utility of Deep Sequencing To Critically Assess Population Diversity in RNA Viruses

Next generation sequencing (NGS)/deep sequencing has become an important tool in the study of viruses. The use of unique molecular identifiers (UMI) can overcome the limitations of PCR errors and PCR-mediated recombination and reveal the true sampling depth of a viral population being sequenced in an NGS experiment. This approach of enhanced sequence data represents an ideal tool to study both high and low abundance drug resistance mutations and more generally to explore the genetic structure of viral populations. Central to the use of the UMI/Primer ID approach is the creation of a template consensus sequence (TCS) for each genome sequenced. Here we describe a series of experiments to validate several aspects of the Multiplexed Primer ID (MPID) sequencing approach using the MiSeq platform. We have evaluated how multiplexing of cDNA synthesis and amplicons affects the sampling depth of the viral population for each individual cDNA and amplicon to understand the relationship between broader genome coverage versus maximal sequencing depth. We have validated reproducibility of the MPID assay in the detection of minority mutations in viral genomes. We have also examined the determinants that allow sequencing reads of PCR recombinants to contaminate the final TCS data set and show how such contamination can be limited. Finally, we provide several examples where we have applied MPID to analyze features of minority variants and describe limits on their detection in viral populations of HIV-1 and SARS-CoV-2 to demonstrate the generalizable utility of this approach with any RNA virus

Higgs-mediated leptonic decays of B_s and B_d mesons as probes of supersymmetry

If tan(beta) is large, down-type quark mass matrices and Yukawa couplings cannot be simultaneously diagonalized, and flavour violating couplings of the neutral Higgs bosons are induced at the 1-loop level. These couplings lead to Higgs-mediated contributions to the decays B_s -> mu+ mu- and B_d -> tau+ tau-, at a level that might be of interest for the current Tevatron run, or possibly, at B-factories. We evaluate the branching ratios for these decays within the framework of minimal gravity-, gauge- and anomaly-mediated SUSY breaking models, and also in SU(5) supergravity models with non-universal gaugino mass parameters at the GUT scale. We find that the contribution from gluino loops, which seems to have been left out in recent phenomenological analyses, is significant. We explore how the branching fraction varies in these models, emphasizing parameter regions consistent with other observations.Comment: Revised to accommodate minor changes in original text and update reference

Probing Topcolor-Assisted Technicolor from Top-Charm Associated Production at LHC

We propose to probe the topcolor-assisted technicolor (TC2) model from the top-charm associated productions at the LHC, which are highly suppressed in the Standard Model. Due to the flavor-changing couplings of the top quark with the scalars (top-pions and top-Higgs) in TC2 model, the top-charm associated productions can occur via both the s-channel and t-channel parton processes by exchanging a scalar field at the LHC. We examined these processes through Monte Carlo simulation and found that they can reach the observable level at the LHC in quite a large part of the parameter space of the TC2 model.Comment: Version to appear in PRD (Rapid Communication

Force and Motion Generation of Molecular Motors: A Generic Description

We review the properties of biological motor proteins which move along linear filaments that are polar and periodic. The physics of the operation of such motors can be described by simple stochastic models which are coupled to a chemical reaction. We analyze the essential features of force and motion generation and discuss the general properties of single motors in the framework of two-state models. Systems which contain large numbers of motors such as muscles and flagella motivate the study of many interacting motors within the framework of simple models. In this case, collective effects can lead to new types of behaviors such as dynamic instabilities of the steady states and oscillatory motion.Comment: 29 pages, 9 figure