Influenza A M2 Protein Conformation Depends On Choice Of Model Membrane

While crystal and NMR structures exist of the influenza A M2 protein, there is disagreement between models. Depending on the requirements of the technique employed, M2 has been studied in a range of membrane mimetics including detergent micelles and membrane bilayers differing in lipid composition. The use of different model membranes complicates the integration of results from published studies necessary for an overall understanding of the M2 protein. Here we show using site-directed spin-label EPR spectroscopy (SDSL-EPR) that the conformations of M2 peptides in membrane bilayers are clearly influenced by the lipid composition of the bilayers. Altering the bilayer thickness or the lateral pressure profile within the bilayer membrane changes the M2 conformation observed. The multiple M2 peptide conformations observed here, and in other published studies, optimistically may be considered conformations that are sampled by the protein at various stages during influenza infectivity. However, care should be taken that the heterogeneity observed in published structures is not simply an artifact of the choice of the model membrane. © 2015 Wiley Periodicals, Inc. Biopolymers (Pept Sci) 104: 405–411, 2015

Suppressing Quantum Fluctuations in Classicalization

We study vacuum quantum fluctuations of simple Nambu-Goldstone bosons - derivatively coupled single scalar-field theories possessing shift-symmetry in field space. We argue that quantum fluctuations of the interacting field can be drastically suppressed with respect to the free-field case. Moreover, the power-spectrum of these fluctuations can soften to become red for sufficiently small scales. In quasiclassical approximation, we demonstrate that this suppression can only occur for those theories that admit such classical static backgrounds around which small perturbations propagate faster than light. Thus, a quasiclassical softening of quantum fluctuations is only possible for theories which classicalize instead of having a usual Lorentz invariant and local Wilsonian UV- completion. We illustrate our analysis by estimating the quantum fluctuations for the DBI-like theories.Comment: 6 pages, no figures, published version, more general discussion of uncertainty relation in QFT, improved and more general derivation of the main resul

Collinear and Soft Divergences in Perturbative Quantum Gravity

Collinear and soft divergences in perturbative quantum gravity are investigated to arbitrary orders in amplitudes for wide-angle scattering, using methods developed for gauge theories. We show that collinear singularities cancel when all such divergent diagrams are summed over, by using the gravitational Ward identity that decouples the unphysical polarizations from the S-matrix. This analysis generalizes a result previously demonstrated in the eikonal approximation. We also confirm that the only virtual graviton corrections that give soft logarithmic divergences are of the ladder and crossed ladder type.Comment: 10 pages, 12 figure

Modified general relativity as a model for quantum gravitational collapse

We study a class of Hamiltonian deformations of the massless Einstein-Klein-Gordon system in spherical symmetry for which the Dirac constraint algebra closes. The system may be regarded as providing effective equations for quantum gravitational collapse. Guided by the observation that scalar field fluxes do not follow metric null directions due to the deformation, we find that the equations take a simple form in characteristic coordinates. We analyse these equations by a unique combination of numerical methods and find that Choptuik's mass scaling law is modified by a mass gap as well as jagged oscillations. Furthermore, the results are universal with respect to different initial data profiles and robust under changes of the deformation.Comment: 22 pages, 4 figure

Live imaging of stem cell and progeny behaviour in physiological hair-follicle regeneration

Tissue development and regeneration depend on cell-cell interactions and signals that target stem cells and their immediate progeny. However, the cellular behaviours that lead to a properly regenerated tissue are not well understood. Using a new, non-invasive, intravital two-photon imaging approach we study physiological hair-follicle regeneration over time in live mice. By these means we have monitored the behaviour of epithelial stem cells and their progeny during physiological hair regeneration and addressed how the mesenchyme influences their behaviour. Consistent with earlier studies, stem cells are quiescent during the initial stages of hair regeneration, whereas the progeny are more actively dividing. Moreover, stem cell progeny divisions are spatially organized within follicles. In addition to cell divisions, coordinated cell movements of the progeny allow the rapid expansion of the hair follicle. Finally, we show the requirement of the mesenchyme for hair regeneration through targeted cell ablation and long-term tracking of live hair follicles. Thus, we have established an in vivo approach that has led to the direct observation of cellular mechanisms of growth regulation within the hair follicle and that has enabled us to precisely investigate functional requirements of hair-follicle components during the process of physiological regeneration. © 2012 Macmillan Publishers Limited. All rights reserved

Inelastic Black Hole Scattering from Charged Scalar Amplitudes

We explain how the lowest-order classical gravitational radiation produced during the inelastic scattering of two Schwarzschild black holes in General Relativity can be obtained from a tree scattering amplitude in gauge theory coupled to scalar fields. The gauge calculation is related to gravity through the double copy. We remove unwanted scalar forces which can occur in the double copy by introducing a massless scalar in the gauge theory, which is treated as a ghost in the link to gravity. We hope these methods are a step towards a direct application of the double copy at higher orders in classical perturbation theory, with the potential to greatly streamline gravity calculations for phenomenological applications.Comment: 28 pages, 6 figure

Arabidopsis thaliana MIRO1 and MIRO2 GTPases Are Unequally Redundant in Pollen Tube Growth and Fusion of Polar Nuclei during Female Gametogenesis

MIRO GTPases have evolved to regulate mitochondrial trafficking and morphology in eukaryotic organisms. A previous study showed that T-DNA insertion in the Arabidopsis MIRO1 gene is lethal during embryogenesis and affects pollen tube growth and mitochondrial morphology in pollen, whereas T-DNA insertion in MIRO2 does not affect plant development visibly. Phylogenetic analysis of MIRO from plants revealed that MIRO 1 and 2 orthologs in dicots cluster in two separate groups due to a gene/genome duplication event, suggesting that functional redundancy may exists between the two MIRO genes. To investigate this possibility, we generated miro1(+/−)/miro2-2(−/−) plants. Compared to miro1(+/−) plants, the miro1(+/−)/miro2-2(−/−) plants showed increased segregation distortion. miro1(+/−)/miro2-2(−/−) siliques contained less aborted seeds, but more than 3 times the number of undeveloped ovules. In addition, reciprocal crosses showed that co-transmission through the male gametes was nearly absent, whereas co-transmission through the female gametes was severely reduced in miro1(+/−)/miro2-2(−/−) plants. Further investigations revealed that loss of MIRO2 (miro2(−/−)) function in the miro1(+/−) background enhanced pollen tube growth defects. In developing miro1(+/−)/miro2(−/−) embryo sacs, fusion of polar nuclei was further delayed or impaired compared to miro1 plants. This phenotype has not been reported previously for miro1 plants and coincides with studies showing that defects in some mitochondria-targeted genes results in the same phenotype. Our observations show that loss of function in MIRO2 in a miro1(+/−) background enhances the miro1(+/−) phenotype significantly, even though miro2(−/−) plants alone does not display any phenotypes. Based on these findings, we conclude that MIRO1 and MIRO2 are unequally redundant and that a proportion of the miro1(+/−)/miro2(−/−) plants haploid gametes displays the complete null phenotype of MIRO GTPase function at key developmental stages

Thermal Contraction of Electrodeposited Bi/BiSb Superlattice Nanowires

The lattice parameter of Bi/BiSb superlattice nanowire (SLNW) has been measured using in situ high-temperature X-ray diffraction method. The single crystalline Bi/BiSb SLNW arrays with different bilayer thicknesses have been fabricated within the porous anodic alumina membranes (AAMs) by a charge-controlled pulse electrodeposition. Different temperature dependences of the lattice parameter and thermal expansion coefficient were found for the SLNWs. It was found that the thermal expansion coefficient of the SLNWs with a large bilayer thickness has weak temperature dependence, and the interface stress and defect are the main factors responsible for the thermal contraction of the SLNWs