Ten Simple Rules for Searching and Organizing the Scientific Literature

The exponentially increasing number of published papers (1.4 million per year by one estimate) makes it more and more difficult for us to manage the flood of scientific information. Each of us has acquired some protocol to find and organize journal articles and other references over the course of our careers. Most of those protocols are likely to have been formed by old routines or idleness rather than a structured approach to save time and frustration over the long run. Furthermore, with the Web 2.0 revolution, new ways of handling information are emerging (O’Reilly 2005). For example, traditional standalone tools for reference management like EndNote are being supplemented by centralized resources like RefWorks and social bookmarking sites as described subsequently. This fusion of personal and public information offers the promise of efficiency through better organization, which in turn leads to better science.

How can seasoned scientists do better using these tools and those newer to the field start off in the right way? To start to answer that question, I present ten simple rules to master the search and organization of new literature. This is not meant to be comprehensive. It represents the experiences of a few and I welcome your thoughts, through comments to this article, on what you do to keep your references organized.

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Field dependent quasiparticles in the infinite dimensional Hubbard model

We present dynamical mean field theory (DMFT) results for the local spectral densities of the one- and two-particle response functions for the infinite dimensional Hubbard model in a magnetic field. We look at the different regimes corresponding to half-filling, near half-filling and well away from half-filling, for intermediate and strong values of the local interaction $U$. The low energy results are analyzed in terms of quasiparticles with field dependent parameters. The renormalized parameters are determined by two different methods, both based on numerical renormalization group (NRG) calculations, and we find good agreement. Away from half-filling the quasiparticle weights, $z_\sigma(H)$, differ according to the spin type $\sigma=\uparrow$ or $\sigma=\downarrow$. Using the renormalized parameters, we show that DMFT-NRG results for the local longitudinal and transverse dynamic spin susceptibilities in an arbitrary field can be understood in terms of repeated scattering of these quasiparticles. We also check Luttinger's theorem for the Hubbard model and find it to be satisfied in all parameter regimes and for all values of the magnetic field.Comment: 14 pages, 21 figure

On some derivatives of phenylethers, 2

Products and the synthesis of chloronitrobenzol with certain phenolates are discussed, as is the p-oxyphenylether occasionally produced. Yield, melting point, and physical description are given for each product. The products include 2,4'-dinitrophenylether; 2,2'-dinitrophenylether; p-nitrophenylether-p-oxybenzoic acid and its methylester; p-aminophenylether-p-oxybenzoic acid, its sulfate, and its barium salt; and p-oxypenylether

Symmetry and Variation of Hodge Structures

The main problem addressed in the paper is the Torelli problem for n-dimensional varieties of general type, more specifically for varieties with ample canonical bundle. It asks under which geometrical condition for a variety the period map for the Hodge structure of weight n is a local embedding. We define a line bundle to be almost very ample iff the associated linear system is base point free and yields an injective morphism. We define instead a line bundle to be quasi very ample if it yields a birational morphism which is a local embedding on the complement of a finite set. Our main result is the existence of infinitely many families of surfaces of general type, with quasi very ample canonical bundle, each yielding an irreducible connected component of the moduli space, such that the period map has everywhere positive dimensional fibres. These surfaces are surfaces isogenous to a product, i.e., quotients of a product of curves by the free action of a finite group G. In the paper we also give some sufficient conditions in order that global double Torelli holds for these surfaces, i.e., the isomorphism type of the surface is reconstructed from the fundamental group plus the Hodge structure on the cohomology algebra. We do this via some useful lemmas on the action of an abelian group on the cohomology of an algebraic curve. We also establish a birational description of the moduli space of curves of genus 3 with a non trivial 3-torsion divisor.Comment: 38 pages, to appear in Asian J. Math., Volume in honour of Y.T. Siu's 60-th birthday. Revision, we correct the main theorem replacing almost very ample by quasi very ample, which is in one way better and in one way wors

NaCl transport stimulates prostaglandin release in cultured renal epithelial (MDCK) cells

Prostaglandins (PGs) can modulate a variety of renal functions, including Na+ and Cl- reabsorption. However, it is not known if a direct interdependence exists between PG synthesis and transport activity. The present study was done to find out whether or not the rate of NaCl transport has an influence on PG synthesis in renal tubular cells. For our studies we used cultures of so-called high-resistance MDCK cells, which were originally derived from canine kidney. This cell type has a loop diuretic- and ouabain-sensitive NaCl transport that can be enhanced by activation of the adenylate cyclase (AC). In MDCK cell cultures we found that each state of increased NaCl transport during stimulation of AC by either epinephrine (10(-6) M), isoprenaline (10(-5) M), or forskolin (10(-5) M) was accompanied by a twofold increase in PG release. During inhibition of NaCl transport by furosemide (10(-4) M) or ouabain (2 X 10(-4) M), stimulation of AC failed to increase PGE2 release, whereas basal PG production was not inhibited by either furosemide or ouabain. Furthermore, PG formation during activation of AC was dependent on the concentration of extracellular Na+, whereas PG formation in the absence of activators of AC was independent of extracellular Na+. These results suggest that increased NaCl transport stimulates PG formation in cultures of high-resistance MDCK cells

Electromagnetic form factors of the nucleon in effective field theory

We calculate the electromagnetic form factors of the nucleon to third chiral order in manifestly Lorentz-invariant effective field theory. The rho and omega mesons as well as the Delta(1232) resonance are included as explicit dynamical degrees of freedom. To obtain a self-consistent theory with respect to constraints we consider the proper relations among the couplings of the effective Lagrangian. For the purpose of generating a systematic power counting, the extended on-mass-shell renormalization scheme is applied in combination with the small-scale expansion. The results for the electric and magnetic Sachs form factors are analyzed in terms of experimental data and compared to previous findings in the framework of chiral perturbation theory. The pion-mass dependence of the form factors is briefly discussed.Comment: 26 pages, 9 figure

A proof of factorization for B -> D pi

We prove that the matrix elements of four fermion operators mediating the decay B^0 -> D^+ \pi^- and B^- -> D^0 \pi^- factor into the product of a form factor describing the B -> D transition and a convolution of a short distance coefficient with the nonperturbative pion light-cone wave function. This is shown to all orders in alpha_s, up to corrections suppressed by factors of 1/mb, 1/mc, and 1/E_pi. It is not necessary to assume that the pion state is dominated by the q-qbar Fock state.Comment: 4 pages, 3 figs, PRL versio

Transit Time and Charge Correlations of Single Photoelectron Events in R7081 PMTs

During the calibration phase of the photomultiplier tubes (PMT) for the Double Chooz experiment the PMT response to light with single photoelectron (SPE) intensity was analysed. With our setup we were able to measure the combined transit time and charge response of the PMT and therefore we could deconstruct and analyse all physical effects having an influence on the PMT signal. Based on this analysis charge and time correlated probability density functions were developed to include the PMT response in a Monte Carlo simulation.Comment: minor changes by referee reques