51 research outputs found

    Scalability of an Unstructured Grid Continuous Galerkin Based Hurricane Storm Surge Model

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    This paper evaluates the parallel performance and scalability of an unstructured grid Shallow Water Equation (SWE) hurricane storm surge model. We use the ADCIRC model, which is based on the generalized wave continuity equation continuous Galerkin method, within a parallel computational framework based on domain decomposition and the MPI (Message Passing Interface) library. We measure the performance of the model run implicitly and explicitly on various grids. We analyze the performance as well as accurracy with various spatial and temporal discretizations. We improve the output writing performance by introducing sets of dedicated writer cores. Performance is measured on the Texas Advanced Computing Center Ranger machine. A high resolution 9,314,706 finite element node grid with 1s time steps can complete a day of real time hurricane storm surge simulation in less than 20 min of computer wall clock time, using 16,384 cores with sets of dedicated writer cores

    Epithelial-immune cell interplay in primary Sjogren syndrome salivary gland pathogenesis

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    In primary Sjogren syndrome (pSS), the function of the salivary glands is often considerably reduced. Multiple innate immune pathways are likely dysregulated in the salivary gland epithelium in pSS, including the nuclear factor-kappa B pathway, the inflammasome and interferon signalling. The ductal cells of the salivary gland in pSS are characteristically surrounded by a CD4(+) T cell-rich and B cell-rich infiltrate, implying a degree of communication between epithelial cells and immune cells. B cell infiltrates within the ducts can initiate the development of lymphoepithelial lesions, including basal ductal cell hyperplasia. Vice versa, the epithelium provides chronic activation signals to the glandular B cell fraction. This continuous stimulation might ultimately drive the development of mucosa-associated lymphoid tissue lymphoma. This Review discusses changes in the cells of the salivary gland epithelium in pSS (including acinar, ductal and progenitor cells), and the proposed interplay of these cells with environmental stimuli and the immune system. Current therapeutic options are insufficient to address both lymphocytic infiltration and salivary gland dysfunction. Successful rescue of salivary gland function in pSS will probably demand a multimodal therapeutic approach and an appreciation of the complicity of the salivary gland epithelium in the development of pSS. Salivary gland dysfunction is an important characteristic of primary Sjogren syndrome (pSS). In this Review, the authors discuss various epithelial abnormalities in pSS and the mechanisms by which epithelial cell-immune cell interactions contribute to disease development and progression

    Encounters and medication use for ocular surface disorders among patients treated with dupilumab: A cohort studyCapsule Summary

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    Background: Although dupilumab has been associated with the development of conjunctivitis, little is known about other ocular surface disorders such as dry eye and how these side effects are managed. Objective: To evaluate the incidence and management of ocular surface disorders, including dry eye and conjunctivitis, among patients treated with dupilumab. Methods: Using US claims data, we evaluated the incidence of encounters for ocular surface disorders among patients treated with dupilumab. Secondary outcomes included ophthalmic medication use. A propensity score matched, active-comparator, new-user cohort design was used to compare the incidence of ocular surface disorders between those starting dupilumab versus methotrexate. Results: Among those with a history of atopic dermatitis, encounters for ocular surface disorders were more common in the 6 months after starting dupilumab than in the 6 months prior (11.7% versus 8.7%, P < .001); 59.7% of those with a new ocular surface disorder diagnosis filled a prescription for an ophthalmic medication. The incidence of ocular surface disorders was higher among those treated with dupilumab than that in those treated with methotrexate (odds ratio 1.64; 95% confidence interval 1.17-2.30). Limitations: Observational design. Conclusions: Dupilumab use for atopic dermatitis was associated with an increased risk of ocular surface disorders. Most patients who developed an ocular surface disorder received a prescription for an ophthalmic medication
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