Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts

A comprehensive characterization of the lipidome from limited starting material remains very challenging. Here we report a high-sensitivity lipidomics workflow based on nanoflow liquid chromatography and trapped ion mobility spectrometry (TIMS). Taking advantage of parallel accumulation-serial fragmentation (PASEF), we fragment on average 15 precursors in each of 100 ms TIMS scans, while maintaining the full mobility resolution of co-eluting isomers. The acquisition speed of over 100 Hz allows us to obtain MS/MS spectra of the vast majority of isotope patterns. Analyzing 1 mu L of human plasma, PASEF increases the number of identified lipids more than three times over standard TIMS-MS/MS, achieving attomole sensitivity. Building on high intra- and inter-laboratory precision and accuracy of TIMS collisional cross sections (CCS), we compile 1856 lipid CCS values from plasma, liver and cancer cells. Our study establishes PASEF in lipid analysis and paves the way for sensitive, ion mobility-enhanced lipidomics in four dimensions

Measuring the equation of state of a hard-disc fluid

We use video microscopy to study a two-dimensional (2D) model fluid of charged colloidal particles suspended in water and compute the pressure from the measured particle configurations. Direct experimental control over the particle density by means of optical tweezers allows the precise measurement of pressure as a function of density. We compare our data with theoretical predictions for the equation of state, the pair-correlation function and the compressibility of a hard-disc fluid and find good agreement, both for the fluid and the solid phase. In particular the location of the transition point agrees well with results from Monte Carlo simulations.Comment: 7 pages, to appear in EPL, slightly corrected versio

Integrability of the N=2 boundary sine-Gordon model

We construct a boundary Lagrangian for the N=2 supersymmetric sine-Gordon model which preserves (B-type) supersymmetry and integrability to all orders in the bulk coupling constant g. The supersymmetry constraint is expressed in terms of matrix factorisations.Comment: LaTeX, 19 pages, no figures; v2: title changed, minor improvements, refs added, to appear in J. Phys. A: Math. Ge

VOFilter, Bridging Virtual Observatory and Industrial Office Applications

VOFilter is an XML based filter developed by the Chinese Virtual Observatory project to transform tabular data files from VOTable format into OpenDocument format. VOTable is an XML format defined for the exchange of tabular data in the context of the Virtual Observatory (VO). It is the first Proposed Recommendation defined by International Virtual Observatory Alliance, and has obtained wide support from both the VO community and many Astronomy projects. OpenOffice.org is a mature, open source, front office applications suite with the advantage of native support of industrial standard OpenDocument XML file format. Using the VOFilter, VOTable files can be loaded in OpenOffice.org Calc, a spreadsheet application, and then displayed and analyzed as other spreadsheet files. Here, the VOFilter acts as a connector, bridging the coming VO with current industrial office applications. Virtual Observatory and technical background of the VOFilter are introduced. Its workflow, installation and usage are presented. Existing problems and limitations are also discussed together with the future development plans.Comment: Accepted for publication in ChJAA (9 pages, 2 figures, 185KB

Highly charged ions in Penning traps, a new tool for resolving low lying isomeric states

The use of highly charged ions increases the precision and resolving power, in particular for short-lived species produced at on-line radio-isotope beam facilities, achievable with Penning trap mass spectrometers. This increase in resolving power provides a new and unique access to resolving low-lying long-lived ($T_{1/2} > 50$ ms) nuclear isomers. Recently, the $111.19(22)$ keV (determined from $\gamma$-ray spectroscopy) isomeric state in $^{78}$Rb has been resolved from the ground state, in a charge state of $q=8+$ with the TITAN Penning trap at the TRIUMF-ISAC facility. The excitation energy of the isomer was measured to be $108.7(6.4)$ keV above the ground state. The extracted masses for both the ground and isomeric states, and their difference, agree with the AME2003 and Nuclear Data Sheet values. This proof of principle measurement demonstrates the feasibility of using Penning trap mass spectrometers coupled to charge breeders to study nuclear isomers and opens a new route for isomer searches.Comment: 8 pages, 6 figure

WZW orientifolds and finite group cohomology

The simplest orientifolds of the WZW models are obtained by gauging a Z_2 symmetry group generated by a combined involution of the target Lie group G and of the worldsheet. The action of the involution on the target is by a twisted inversion g \mapsto (\zeta g)^{-1}, where \zeta is an element of the center of G. It reverses the sign of the Kalb-Ramond torsion field H given by a bi-invariant closed 3-form on G. The action on the worldsheet reverses its orientation. An unambiguous definition of Feynman amplitudes of the orientifold theory requires a choice of a gerbe with curvature H on the target group G, together with a so-called Jandl structure introduced in hep-th/0512283. More generally, one may gauge orientifold symmetry groups \Gamma = Z_2 \ltimes Z that combine the Z_2-action described above with the target symmetry induced by a subgroup Z of the center of G. To define the orientifold theory in such a situation, one needs a gerbe on G with a Z-equivariant Jandl structure. We reduce the study of the existence of such structures and of their inequivalent choices to a problem in group-\Gamma cohomology that we solve for all simple simply-connected compact Lie groups G and all orientifold groups \Gamma = Z_2 \ltimes Z.Comment: 48+1 pages, 11 figure

Lightning-produced NO_x over Brazil during TROCCINOX: Airborne measurements in tropical and subtropical thunderstorms and the importance of mesoscale convective systems

International audienceDuring the TROCCINOX field experiments in February?March 2004 and February 2005, airborne in situ measurements of NO, NOy, CO, and O3 mixing ratios and the J(NO2) photolysis rate were carried out in the anvil outflow of thunderstorms over southern Brazil. Both tropical and subtropical thunderstorms were investigated, depending on the location of the South Atlantic convergence zone. Tropical air masses were discriminated from subtropical ones according to the higher equivalent potential temperature (?e) in the lower and mid troposphere, the higher CO mixing ratio in the mid troposphere, and the lower wind velocity and proper wind direction in the upper troposphere. During thunderstorm anvil penetrations, typically at 20?40 km horizontal scales, NOx mixing ratios were on average enhanced by 0.2?1.6 nmol mol?1. This enhancement was mainly attributed to NOx production by lightning and partly due to upward transport from the NOx-richer boundary layer. In addition, CO mixing ratios were occasionally enhanced, indicating upward transport from the boundary layer. For the first time, the composition of the anvil outflow from a large, long-lived mesoscale convective system (MCS) advected from northern Argentina and Uruguay was investigated in more detail. Over a horizontal scale of about 400 km, NOx, CO and O3 mixing ratios were significantly enhanced in these air masses in the range of 0.6?1.1, 110?140 and 60?70 nmol mol?1, respectively. Analyses from trace gas correlations and a Lagrangian particle dispersion model indicate that polluted air masses, probably from the Buenos Aires urban area and from biomass burning regions, were uplifted by the MCS. Ozone was distinctly enhanced in the aged MCS outflow, due to photochemical production and entrainment of O3-rich air masses from the upper troposphere ? lower stratosphere region. The aged MCS outflow was transported to the north, ascended and circulated, driven by the Bolivian High over the Amazon basin. In the observed case, the O3-rich MCS outflow remained over the continent and did not contribute to the South Atlantic ozone maximum