Magnetic nanoparticles as efficient bulk pinning centers in type-II superconductors

Enhancement of flux pinning by magnetic nanoparticles embedded into the bulk of type-2 superconductor is studied both theoretically and experimentally. Magnetic part of the pinning force associated with the interaction between a spherical magnetic inclusion and an Abrikosov vortex was calculated in the London approximation. Calculations are supported by the experimental results obtained on sonochemically modified MgB2 superconductor with embedded magnetic Fe2O3 nanoparticles and compared to MgB2 with nonmagnetic Mo2O5 pinning centers of similar concentration and particle size distribution. It is shown that ferromagnetic nanoparticles result in a considerable enhancement of vortex pinning in large-kappa type-2 superconductors.Comment: PDF, 14 page

ENSO impact on northwest African upwelling

One of the most robust ENSO teleconnections is that linking SST anomalies in the equatorial Pacific and Tropical North Atlantic (TNA) in boreal spring. While the role played by the wind-evaporation-SST (WES) feedback in maintaining the ENSO-related SST anomalies over the TNA is well understood, many questions remain open about the signature of this ENSO teleconnection on the northwest African upwelling system and its role for the further response during the spring season along the whole TNA. This issue is analyzed here in both observations and CGCM models with different nominal resolution (CMIP6 HighResMIP simulations). In particular, the relevance of the mean state variability in the tropical Atlantic for modulating the northwest African upwelling response to ENSO has been assessed in depth. Furthermore, and considering the exceptional ecological importance of this upwelling area, the ENSO-related influence on the spatio-temporal variability of round sardinella (the dominant fish species in terms of abundance) has been also analyzed. To this aim, an end-to-end strategy which combines models of physics (hydrodynamic), lower trophic levels (nutrient-plankton) and upper trophic levels (sardinella), is used. All these analyses highlight from both climate and ecological perspectives, the relevance of better understanding the ENSO-northwest African upwelling teleconnection.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech

Quantum character varieties and braided module categories

We compute quantum character varieties of arbitrary closed surfaces with boundaries and marked points. These are categorical invariants $\int_S\mathcal A$ of a surface $S$, determined by the choice of a braided tensor category $\mathcal A$, and computed via factorization homology. We identify the algebraic data governing marked points and boundary components with the notion of a {\em braided module category} for $\mathcal A$, and we describe braided module categories with a generator in terms of certain explicit algebra homomorphisms called {\em quantum moment maps}. We then show that the quantum character variety of a decorated surface is obtained from that of the corresponding punctured surface as a quantum Hamiltonian reduction. Characters of braided $\mathcal A$-modules are objects of the torus category $\int_{T^2}\mathcal A$. We initiate a theory of character sheaves for quantum groups by identifying the torus integral of $\mathcal A=\operatorname{Rep_q} G$ with the category $\mathcal D_q(G/G)-\operatorname{mod}$ of equivariant quantum $\mathcal D$-modules. When $G=GL_n$, we relate the mirabolic version of this category to the representations of the spherical double affine Hecke algebra (DAHA) $\mathbb{SH}_{q,t}$.Comment: 33 pages, 5 figures. Final version, to appear in Sel. Math. New Se

Dusty core disease (DuCD): expanding morphological spectrum of RYR1 recessive myopathies

Several morphological phenotypes have been associated to RYR1-recessive myopathies. We recharacterized the RYR1-recessive morphological spectrum by a large monocentric study performed on 54 muscle biopsies from a large cohort of 48 genetically confirmed patients, using histoenzymology, immunohistochemistry, and ultrastructural studies. We also analysed the level of RyR1 expression in patients' muscle biopsies. We defined "dusty cores" the irregular areas of myofibrillar disorganisation characterised by a reddish-purple granular material deposition with uneven oxidative stain and devoid of ATPase activity, which represent the characteristic lesion in muscle biopsy in 54% of patients. We named Dusty Core Disease (DuCD) the corresponding entity of congenital myopathy. Dusty cores had peculiar histological and ultrastructural characteristics compared to the other core diseases. DuCD muscle biopsies also showed nuclear centralization and type1 fibre predominance. Dusty cores were not observed in other core myopathies and centronuclear myopathies. The other morphological groups in our cohort of patients were: Central Core (CCD: 21%), Core-Rod (C&R:15%) and Type1 predominance "plus" (T1P+:10%). DuCD group was associated to an earlier disease onset, a more severe clinical phenotype and a lowest level of RyR1 expression in muscle, compared to the other groups. Variants located in the bridge solenoid and the pore domains were more frequent in DuCD patients. In conclusion, DuCD is the most frequent histopathological presentation of RYR1-recessive myopathies. Dusty cores represent the unifying morphological lesion among the DuCD pathology spectrum and are the morphological hallmark for the recessive form of disease

Book of Abstracts submitted to the IV Congress of Marine Sciences

The Canary Upwelling System (CUS), a major eastern boundary upwelling system, sustains large crossborder fisheries of small pelagic fish, which poses the question of stock connectivity. Studies suggest that ichthyoplankton transport from the northwest African coast to the Canary Islands (CI) is facilitated by coastal- upwelling associated filaments. Here we analyze connections between larval supply to the CI and sardine and anchovy populations that spawn over the continental shelf. For both species, ichthyoplankton observations (1) at the shelf and (2) near the island of Gran Canaria (GC) are used. Predictions of ichthyoplankton transport to GC are obtained from the Ichthyop Lagrangian transport model, which is forced by a high-resolution hydrodynamic model (ROMS) that reproduces the regional circulation. Results show that upwelling filaments play an important role in the transport of larvae to GC. However, (1) filaments are not the only mechanism, and (2) filament presence does not necessarily imply larval transport. Anchovy and sardine larval presence at GC appears to be independent of the respective adult spawning seasonality. Combining of observed and modeled data does not succeed in reproducing the observed larval patterns at GC. Various hypotheses are proposed to explain this discrepancy in larval transport to GC

Helical Chirality: a Link between Local Interactions and Global Topology in DNA

DNA supercoiling plays a major role in many cellular functions. The global DNA conformation is however intimately linked to local DNA-DNA interactions influencing both the physical properties and the biological functions of the supercoiled molecule. Juxtaposition of DNA double helices in ubiquitous crossover arrangements participates in multiple functions such as recombination, gene regulation and DNA packaging. However, little is currently known about how the structure and stability of direct DNA-DNA interactions influence the topological state of DNA. Here, a crystallographic analysis shows that due to the intrinsic helical chirality of DNA, crossovers of opposite handedness exhibit markedly different geometries. While right-handed crossovers are self-fitted by sequence-specific groove-backbone interaction and bridging Mg2+ sites, left-handed crossovers are juxtaposed by groove-groove interaction. Our previous calculations have shown that the different geometries result in differential stabilisation in solution, in the presence of divalent cations. The present study reveals that the various topological states of the cell are associated with different inter-segmental interactions. While the unstable left-handed crossovers are exclusively formed in negatively supercoiled DNA, stable right-handed crossovers constitute the local signature of an unusual topological state in the cell, such as the positively supercoiled or relaxed DNA. These findings not only provide a simple mechanism for locally sensing the DNA topology but also lead to the prediction that, due to their different tertiary intra-molecular interactions, supercoiled molecules of opposite signs must display markedly different physical properties. Sticky inter-segmental interactions in positively supercoiled or relaxed DNA are expected to greatly slow down the slithering dynamics of DNA. We therefore suggest that the intrinsic helical chirality of DNA may have oriented the early evolutionary choices for DNA topology

The cell cycle of the planctomycete Gemmata obscuriglobus with respect to cell compartmentalization

Background: Gemmata obscuriglobus is a distinctive member of the divergent phylum Planctomycetes, all known members of which are peptidoglycan-less bacteria with a shared compartmentalized cell structure and divide by a budding process. G. obscuriglobus in addition shares the unique feature that its nucleoid DNA is surrounded by an envelope consisting of two membranes forming an analogous structure to the membrane-bounded nucleoid of eukaryotes and therefore G. obscuriglobus forms a special model for cell biology. Draft genome data for G. obscuriglobus as well as complete genome sequences available so far for other planctomycetes indicate that the key bacterial cell division protein FtsZ is not present in these planctomycetes, so the cell division process in planctomycetes is of special comparative interest. The membrane-bounded nature of the nucleoid in G. obscuriglobus also suggests that special mechanisms for the distribution of this nuclear body to the bud and for distribution of chromosomal DNA might exist during division. It was therefore of interest to examine the cell division cycle in G. obscuriglobus and the process of nucleoid distribution and nuclear body formation during division in this planctomycete bacterium via light and electron microscopy. Results: Using phase contrast and fluorescence light microscopy, and transmission electron microscopy, the cell division cycle of G. obscuriglobus was determined. During the budding process, the bud was formed and developed in size from one point of the mother cell perimeter until separation. The matured daughter cell acted as a new mother cell and started its own budding cycle while the mother cell can itself initiate budding repeatedly. Fluorescence microscopy of DAPI-stained cells of G. obscuriglobus suggested that translocation of the nucleoid and formation of the bud did not occur at the same time. Confocal laser scanning light microscopy applied to cells stained for membranes as well as DNA confirmed the behaviour of the nucleoid and nucleoid envelope during cell division. Electron microscopy of cryosubstituted cells confirmed deductions from light microscopy concerning nucleoid presence in relation to the stage of budding, and showed that the nucleoid was observed to occur in both mother and bud cells only at later budding stages. It further suggested that nucleoid envelope formed only after the nucleoid was translocated into the bud, since envelopes only appeared in more mature buds, while naked nucleoids occurred in smaller buds. Nucleoid envelope appeared to originate from the intracytoplasmic membranes (ICM) of both mother cell and bud. There was always a connecting passage between mother cell and bud during the budding process until separation of the two cells. The division cycle of the nucleated planctomycete G. obscuriglobus appears to be a complex process in which chromosomal DNA is transported to the daughter cell bud after initial formation of the bud, and this can be performed repeatedly by a single mother cell. Conclusion: The division cycle of the nucleated planctomycete G. obscuriglobus is a complex process in which chromosomal nucleoid DNA is transported to the daughter cell bud after initial formation of a bud without nucleoid. The new bud nucleoid is initially naked and not surrounded by membrane, but eventually acquires a complete nucleoid envelope consisting of two closely apposed membranes as occurs in the mother cell. The membranes of the new nucleoid envelope surrounding the bud nucleoid are derived from intracytoplasmic membranes of both the mother cell and the bud. The cell division of G. obscuriglobus displays some unique features not known in cells of either prokaryotes or eukaryotes

Cyclotomic Gaudin models: construction and Bethe ansatz

This is a pre-copyedited author produced PDF of an article accepted for publication in Communications in Mathematical Physics, Benoit, V and Young, C, 'Cyclotomic Gaudin models: construction and Bethe ansatz', Commun. Math. Phys. (2016) 343:971, first published on line March 24, 2016. The final publication is available at Springer via http://dx.doi.org/10.1007/s00220-016-2601-3 © Springer-Verlag Berlin Heidelberg 2016To any simple Lie algebra $\mathfrak g$ and automorphism $\sigma:\mathfrak g\to \mathfrak g$ we associate a cyclotomic Gaudin algebra. This is a large commutative subalgebra of $U(\mathfrak g)^{\otimes N}$ generated by a hierarchy of cyclotomic Gaudin Hamiltonians. It reduces to the Gaudin algebra in the special case $\sigma = \text{id}$. We go on to construct joint eigenvectors and their eigenvalues for this hierarchy of cyclotomic Gaudin Hamiltonians, in the case of a spin chain consisting of a tensor product of Verma modules. To do so we generalize an approach to the Bethe ansatz due to Feigin, Frenkel and Reshetikhin involving vertex algebras and the Wakimoto construction. As part of this construction, we make use of a theorem concerning cyclotomic coinvariants, which we prove in a companion paper. As a byproduct, we obtain a cyclotomic generalization of the Schechtman-Varchenko formula for the weight function.Peer reviewe

Emergence and Modular Evolution of a Novel Motility Machinery in Bacteria

Bacteria glide across solid surfaces by mechanisms that have remained largely mysterious despite decades of research. In the deltaproteobacterium Myxococcus xanthus, this locomotion allows the formation stress-resistant fruiting bodies where sporulation takes place. However, despite the large number of genes identified as important for gliding, no specific machinery has been identified so far, hampering in-depth investigations. Based on the premise that components of the gliding machinery must have co-evolved and encode both envelope-spanning proteins and a molecular motor, we re-annotated known gliding motility genes and examined their taxonomic distribution, genomic localization, and phylogeny. We successfully delineated three functionally related genetic clusters, which we proved experimentally carry genes encoding the basal gliding machinery in M. xanthus, using genetic and localization techniques. For the first time, this study identifies structural gliding motility genes in the Myxobacteria and opens new perspectives to study the motility mechanism. Furthermore, phylogenomics provide insight into how this machinery emerged from an ancestral conserved core of genes of unknown function that evolved to gliding by the recruitment of functional modules in Myxococcales. Surprisingly, this motility machinery appears to be highly related to a sporulation system, underscoring unsuspected common mechanisms in these apparently distinct morphogenic phenomena