Multiple Core-Hole Coherence in X-Ray Four-Wave-Mixing Spectroscopies

Correlation-function expressions are derived for the coherent nonlinear response of molecules to three resonant ultrafast pulses in the x-ray regime. The ability to create two-core-hole states with controlled attosecond timing in four-wave-mixing and pump probe techniques should open up new windows into the response of valence electrons, which are not available from incoherent x-ray Raman and fluorescence techniques. Closed expressions for the necessary four-point correlation functions are derived for the electron-boson model by using the second order cumulant expansion to describe the fluctuating potentials. The information obtained from multidimensional nonlinear techniques could be used to test and refine this model, and establish an anharmonic oscillator picture for electronic excitations

Simulation of gain stability of THGEM gas-avalanche particle detectors

Charging-up processes affecting gain stability in Thick Gas Electron Multipliers (THGEM) were studied with a dedicated simulation toolkit. Integrated with Garfield++, it provides an effective platform for systematic phenomenological studies of charging-up processes in MPGD detectors. We describe the simulation tool and the fine-tuning of the step-size required for the algorithm convergence, in relation to physical parameters. Simulation results of gain stability over time in THGEM detectors are presented, exploring the role of electrode-thickness and applied voltage on its evolution. The results show that the total amount of irradiated charge through electrode's hole needed for reaching gain stabilization is in the range of tens to hundreds of pC, depending on the detector geometry and operational voltage. These results are in agreement with experimental observations presented previously

A Method of Drusen Measurement Based on the Geometry of Fundus Reflectance

BACKGROUND: The hallmarks of age-related macular degeneration, the leading cause of blindness in the developed world, are the subretinal deposits known as drusen. Drusen identification and measurement play a key role in clinical studies of this disease. Current manual methods of drusen measurement are laborious and subjective. Our purpose was to expedite clinical research with an accurate, reliable digital method. METHODS: An interactive semi-automated procedure was developed to level the macular background reflectance for the purpose of morphometric analysis of drusen. 12 color fundus photographs of patients with age-related macular degeneration and drusen were analyzed. After digitizing the photographs, the underlying background pattern in the green channel was leveled by an algorithm based on the elliptically concentric geometry of the reflectance in the normal macula: the gray scale values of all structures within defined elliptical boundaries were raised sequentially until a uniform background was obtained. Segmentation of drusen and area measurements in the central and middle subfields (1000 μm and 3000 μm diameters) were performed by uniform thresholds. Two observers using this interactive semi-automated software measured each image digitally. The mean digital measurements were compared to independent stereo fundus gradings by two expert graders (stereo Grader 1 estimated the drusen percentage in each of the 24 regions as falling into one of four standard broad ranges; stereo Grader 2 estimated drusen percentages in 1% to 5% intervals). RESULTS: The mean digital area measurements had a median standard deviation of 1.9%. The mean digital area measurements agreed with stereo Grader 1 in 22/24 cases. The 95% limits of agreement between the mean digital area measurements and the more precise stereo gradings of Grader 2 were -6.4 % to +6.8 % in the central subfield and -6.0 % to +4.5 % in the middle subfield. The mean absolute differences between the digital and stereo gradings 2 were 2.8 +/- 3.4% in the central subfield and 2.2 +/- 2.7% in the middle subfield. CONCLUSIONS: Semi-automated, supervised drusen measurements may be done reproducibly and accurately with adaptations of commercial software. This technique for macular image analysis has potential for use in clinical research

First in-beam studies of a Resistive-Plate WELL gaseous multiplier

We present the results of the first in-beam studies of a medium size (10$\times$10 cm$^2$) Resistive-Plate WELL (RPWELL): a single-sided THGEM coupled to a pad anode through a resistive layer of high bulk resistivity ($\sim$10$^9 \Omega$cm). The 6.2~mm thick (excluding readout electronics) single-stage detector was studied with 150~GeV muons and pions. Signals were recorded from 1$\times$1 cm$^2$ square copper pads with APV25-SRS readout electronics. The single-element detector was operated in Ne\(5% $\mathrm{CH_{4}}$) at a gas gain of a few times 10$^4$, reaching 99$\%$ detection efficiency at average pad multiplicity of $\sim$1.2. Operation at particle fluxes up to $\sim$10$^4$ Hz/cm$^2$ resulted in $\sim$23$\%$ gain drop leading to $\sim$5$\%$ efficiency loss. The striking feature was the discharge-free operation, also in intense pion beams. These results pave the way towards robust, efficient large-scale detectors for applications requiring economic solutions at moderate spatial and energy resolutions.Comment: Accepted by JINS

The Resistive-Plate WELL with Argon mixtures - a robust gaseous radiation detector

A thin single-element THGEM-based, Resistive-Plate WELL (RPWELL) detector was operated with 150 GeV/c muon and pion beams in Ne/(5%CH$_4$), Ar/(5%CH$_4$) and Ar/(7%CO$_2$); signals were recorded with 1 cm$^2$ square pads and SRS/APV25 electronics. Detection efficiency values greater than 98% were reached in all the gas mixtures, at average pad multiplicity of 1.2. The use of the 10$^9${\Omega}cm resistive plate resulted in a completely discharge-free operation also in intense pion beams. The efficiency remained essentially constant at 98-99% up to fluxes of $\sim$10$^4$Hz/cm$^2$, dropping by a few % when approaching 10$^5$ Hz/cm$^2$. These results pave the way towards cost-effective, robust, efficient, large-scale detectors for a variety of applications in future particle, astro-particle and applied fields. A potential target application is digital hadron calorimetry.Comment: presented at the 2016 VIenna Conf. On instrumentation. Submitted to the Conference proceeding

Nitrogen storage and use of biochemical indices to assess nitrogen deficiency and growth rate in natural plankton populations

Various newly developed indicators of N deficiency, physiological state (approximate growth rate), and N source for growth were measured during five cruises to Dabob Bay, Washington from early spring to summer. Although nitrate and ammonium in the surface layer were depleted early in the spring, the plankton populations never became extremely N deficient, as indicated by high intracellular amino acid/protein ratios. However, growth rates, estimated from protein/DNA or RNA/DNA ratios, were usually low unless nitrate concentrations were high or had recently been high, as indicated by large intracellular nitrate pools or high nitrate reductase activities. High growth rates were observed during the spring bloom or as a result of the sporadic supply of nitrate to the euphotic zone, which was inferred from measurements of biochemical indicators on several cruises after the spring bloom. The sporadic supply of nitrate could account for the lack of N deficiency in these populations and mask diel periodicity in N utilization. These results demonstrate that biochemical indicators can be easily measured in the field and that variations in indicators such as intracellular amino acid/protein, protein/DNA, RNA/DNA ratios, NR activities and intracellular nitrate concentrations are an aid in understanding plankton dynamics

Measuring Granger Causality between Cortical Regions from Voxelwise fMRI BOLD Signals with LASSO

Functional brain network studies using the Blood Oxygen-Level Dependent (BOLD) signal from functional Magnetic Resonance Imaging (fMRI) are becoming increasingly prevalent in research on the neural basis of human cognition. An important problem in functional brain network analysis is to understand directed functional interactions between brain regions during cognitive performance. This problem has important implications for understanding top-down influences from frontal and parietal control regions to visual occipital cortex in visuospatial attention, the goal motivating the present study. A common approach to measuring directed functional interactions between two brain regions is to first create nodal signals by averaging the BOLD signals of all the voxels in each region, and to then measure directed functional interactions between the nodal signals. Another approach, that avoids averaging, is to measure directed functional interactions between all pairwise combinations of voxels in the two regions. Here we employ an alternative approach that avoids the drawbacks of both averaging and pairwise voxel measures. In this approach, we first use the Least Absolute Shrinkage Selection Operator (LASSO) to pre-select voxels for analysis, then compute a Multivariate Vector AutoRegressive (MVAR) model from the time series of the selected voxels, and finally compute summary Granger Causality (GC) statistics from the model to represent directed interregional interactions. We demonstrate the effectiveness of this approach on both simulated and empirical fMRI data. We also show that averaging regional BOLD activity to create a nodal signal may lead to biased GC estimation of directed interregional interactions. The approach presented here makes it feasible to compute GC between brain regions without the need for averaging. Our results suggest that in the analysis of functional brain networks, careful consideration must be given to the way that network nodes and edges are defined because those definitions may have important implications for the validity of the analysis

A symbolic information approach to determine anticipated and delayed synchronization in neuronal circuit models

The phenomenon of synchronization between two or more areas of the brain coupled asymmetrically is a relevant issue for understanding mechanisms and functions within the cerebral cortex. Anticipated synchronization (AS) refers to the situation in which the receiver system synchronizes to the future dynamics of the sender system while the intuitively expected delayed synchronization (DS) represents exactly the opposite case. AS and DS are investigated in the context of causal information formalism. More specifically, we use a multi-scale symbolic information-theory approach for discriminating the time delay displayed between two areas of the brain when they exchange information.Instituto de Física de Líquidos y Sistemas Biológico

The length dependence of the series elasticity of pig bladder smooth muscle

Strips of urinary bladder smooth muscle were subjected to a series of quick release measurements. Each measurement consisted of several releases and resets to the original length, made during one contraction. The complete length-force characteristic of series elasticity was quantified by estimating H, the amplitude of quick release necessary to reduce the active force to exactly zero, and Db, a measure for the deviation of the characteristic from a straight line. By measuring a series of contractions at increasing stretched strip lengths, the length dependence of these parameters was studied. It was found that H depends linearly on stretched strip length. On average H/length amounted to 0.04. Db decreased when strips were stretched, i.e. a straight line was more closely approximated. Both parameter dependencies support the concept of two separate elastic mechanisms, a linear true passive elasticity in series with a non-linear elasticity in the cross-bridges. For the latter, H amounts to 3.8% of the initial strip length

Oscilatory modules

Developing the ideas of Bressler and Soibelman and of Karabegov, we introduce a notion of an oscillatory module on a symplectic manifold which is a sheaf of modules over the sheaf of deformation quantization algebras with an additional structure. We compare the category of oscillatory modules on a torus to the Fukaya category as computed by Polishchuk and Zaslow.Comment: To appear in the proceedings of Moshe Flato Memorial Conference, November, 2008, Ben Gurion Universit