Multi-camera Realtime 3D Tracking of Multiple Flying Animals

Automated tracking of animal movement allows analyses that would not otherwise be possible by providing great quantities of data. The additional capability of tracking in realtime - with minimal latency - opens up the experimental possibility of manipulating sensory feedback, thus allowing detailed explorations of the neural basis for control of behavior. Here we describe a new system capable of tracking the position and body orientation of animals such as flies and birds. The system operates with less than 40 msec latency and can track multiple animals simultaneously. To achieve these results, a multi target tracking algorithm was developed based on the Extended Kalman Filter and the Nearest Neighbor Standard Filter data association algorithm. In one implementation, an eleven camera system is capable of tracking three flies simultaneously at 60 frames per second using a gigabit network of nine standard Intel Pentium 4 and Core 2 Duo computers. This manuscript presents the rationale and details of the algorithms employed and shows three implementations of the system. An experiment was performed using the tracking system to measure the effect of visual contrast on the flight speed of Drosophila melanogaster. At low contrasts, speed is more variable and faster on average than at high contrasts. Thus, the system is already a useful tool to study the neurobiology and behavior of freely flying animals. If combined with other techniques, such as `virtual reality'-type computer graphics or genetic manipulation, the tracking system would offer a powerful new way to investigate the biology of flying animals.Comment: pdfTeX using libpoppler 3.141592-1.40.3-2.2 (Web2C 7.5.6), 18 pages with 9 figure

A note on a gauge-gravity relation and functional determinants

We present a refinement of a recently found gauge-gravity relation between one-loop effective actions: on the gauge side, for a massive charged scalar in 2d dimensions in a constant maximally symmetric electromagnetic field; on the gravity side, for a massive spinor in d-dimensional (Euclidean) anti-de Sitter space. The inclusion of the dimensionally regularized volume of AdS leads to complete mapping within dimensional regularization. In even-dimensional AdS, we get a small correction to the original proposal; whereas in odd-dimensional AdS, the mapping is totally new and subtle, with the `holographic trace anomaly' playing a crucial role.Comment: 6 pages, io

Spectral Action for Robertson-Walker metrics

We use the Euler-Maclaurin formula and the Feynman-Kac formula to extend our previous method of computation of the spectral action based on the Poisson summation formula. We show how to compute directly the spectral action for the general case of Robertson-Walker metrics. We check the terms of the expansion up to a_6 against the known universal formulas of Gilkey and compute the expansion up to a_{10} using our direct method

Phase transition in a static granular system

We find that a column of glass beads exhibits a well-defined transition between two phases that differ in their resistance to shear. Pulses of fluidization are used to prepare static states with well-defined particle volume fractions $\phi$ in the range 0.57-0.63. The resistance to shear is determined by slowly inserting a rod into the column of beads. The transition occurs at $\phi=0.60$ for a range of speeds of the rod.Comment: 4 pages, 4 figures. The paper is significantly extended, including new dat

Brief of Law Professors as \u3cem\u3eAmici Curiae\u3c/em\u3e in Support of Petitioner

Amici curiae respectfully submit this brief in support of Petitioner, Edward Lane, encouraging the reversal of the judgment of the Eleventh Circuit, because the judgment below is inconsistent with both the Court’s general historical approach to public employee speech and the specific approach to such speech that the Court adopted in Garcetti v. Ceballos, 547 U.S. 410 (2006). Amici are law professors who teach and write about the constitutional rights of public employees and have published a number of scholarly articles on these topics. Amici have no financial stake in the outcome of this case, and in this brief do not ask the Court to reconsider Garcetti. But we are troubled by the tendency in some courts of appeals to misread this Court’s decision in Garcettito articulate ever-broadening readings of the narrow exemption from First Amendment protection the Court carved out. We file this brief to urge this Court to correct these rulings by clarifying the narrow nature of the exemption it recognized

Further functional determinants

Functional determinants for the scalar Laplacian on spherical caps and slices, flat balls, shells and generalised cylinders are evaluated in two, three and four dimensions using conformal techniques. Both Dirichlet and Robin boundary conditions are allowed for. Some effects of non-smooth boundaries are discussed; in particular the 3-hemiball and the 3-hemishell are considered. The edge and vertex contributions to the $C_{3/2}$ coefficient are examined.Comment: 25 p,JyTex,5 figs. on request

Prolongations of Geometric Overdetermined Systems

We show that a wide class of geometrically defined overdetermined semilinear partial differential equations may be explicitly prolonged to obtain closed systems. As a consequence, in the case of linear equations we extract sharp bounds on the dimension of the solution space.Comment: 22 pages. In the second version, a comparison with the classical theory of prolongations was added. In this third version more details were added concerning our construction and especially the use of Kostant's computation of Lie algebra cohomolog

Boundary dynamics and multiple reflection expansion for Robin boundary conditions

In the presence of a boundary interaction, Neumann boundary conditions should be modified to contain a function S of the boundary fields: (\nabla_N +S)\phi =0. Information on quantum boundary dynamics is then encoded in the $S$-dependent part of the effective action. In the present paper we extend the multiple reflection expansion method to the Robin boundary conditions mentioned above, and calculate the heat kernel and the effective action (i) for constant S, (ii) to the order S^2 with an arbitrary number of tangential derivatives. Some applications to symmetry breaking effects, tachyon condensation and brane world are briefly discussed.Comment: latex, 22 pages, no figure

Canine Sense and Sensibility: Tipping Points and Response Latency Variability as an Optimism Index in a Canine Judgement Bias Assessment

Recent advances in animal welfare science used judgement bias, a type of cognitive bias, as a means to objectively measure an animal\u27s affective state. It is postulated that animals showing heightened expectation of positive outcomes may be categorised optimistic, while those showing heightened expectations of negative outcomes may be considered pessimistic. This study pioneers the use of a portable, automated apparatus to train and test the judgement bias of dogs. Dogs were trained in a discrimination task in which they learned to touch a target after a tone associated with a lactose-free milk reward and abstain from touching the target after a tone associated with water. Their judgement bias was then probed by presenting tones between those learned in the discrimination task and measuring their latency to respond by touching the target. A Cox\u27s Proportional Hazards model was used to analyse censored response latency data. Dog and Cue both had a highly significant effect on latency and risk of touching a target. This indicates that judgement bias both exists in dogs and differs between dogs. Test number also had a significant effect, indicating that dogs were less likely to touch the target over successive tests. Detailed examination of the response latencies revealed tipping points where average latency increased by 100% or more, giving an indication of where dogs began to treat ambiguous cues as predicting more negative outcomes than positive ones. Variability scores were calculated to provide an index of optimism using average latency and standard deviation at cues after the tipping point. The use of a mathematical approach to assessing judgement bias data in animal studies offers a more detailed interpretation than traditional statistical analyses. This study provides proof of concept for the use of an automated apparatus for measuring cognitive bias in dogs

Magnetorotational collapse of very massive stars to black holes in full general relativity

We perform axisymmetric simulations of the magnetorotational collapse of very massive stars in full general relativity. Our simulations are applicable to the collapse of supermassive stars (M > 10^3M_sun) and to very massive Pop III stars. We model our initial configurations by n=3 polytropes. The ratio of magnetic to rotational kinetic energy in these configurations is chosen to be small (1% and 10%). We find that such magnetic fields do not affect the initial collapse significantly. The core collapses to a black hole, after which black hole excision is employed to continue the evolution long enough for the hole to reach a quasi-stationary state. We find that the black hole mass is M_h = 0.95M and its spin parameter is J_h/M_h^2 = 0.7, with the remaining matter forming a torus around the black hole. We freeze the spacetime metric ("Cowling approximation") and continue to follow the evolution of the torus after the black hole has relaxed to quasi-stationary equilibrium. In the absence of magnetic fields, the torus settles down following ejection of a small amount of matter due to shock heating. When magnetic fields are present, the field lines gradually collimate along the hole's rotation axis. MHD shocks and the MRI generate MHD turbulence in the torus and stochastic accretion onto the central black hole. When the magnetic field is strong, a wind is generated in the torus, and the torus undergoes radial oscillations that drive episodic accretion onto the hole. These oscillations produce long-wavelength gravitational waves potentially detectable by LISA. The final state of the magnetorotational collapse always consists of a central black hole surrounded by a collimated magnetic field and a hot, thick accretion torus. This system is a viable candidate for the central engine of a long-soft gamma-ray burst.Comment: 17 pages, 13 figures, replaced with the published versio