Potential impact of dreissenids species in relation to the first report of quagga mussel (Dreissena bugensis) at the end of winter 2022 in Lake Garda (Northern Italy)

Along with Dreissena polymorpha (zebra mussel), Dreissena bugensis (quagga mussel) is considered one of the most widespread and successful invasive species in Europe, Russia, and North America. The quagga mussel is a bivalve mollusc of the dreissenids family originating from the estuarine region of the rivers Dnieper and Southern Bug (Black Sea). The spread in Europe began after the 1940s and was associated with construction of canal-river systems. D. polymorpha was observed in Lake Garda since the end of the 1960s. In the last years, D. bugensis was found in the northern perialpine region and in late winter 2022 it was identified along the eastern shores of Lake Garda. Both species are defined as ecosystems engineers because they can strongly change the substrate structure, causing great economic damage in water pipes, potable water treatment plants, and port constructions. Moreover, they can affect resource availability for the other species. A few significant ecological differences between the two species suggest that the impact of quagga mussel could be even larger compared to that caused by zebra mussel. In this poster we will discuss the main expected ecological impacts following the introduction of quagga mussel into new aquatic habitats

Dietary alpha-lactalbumin alters energy balance, gut microbiota composition and intestinal nutrient transporter expression in high-fat diet fed mice

peer-reviewedRecently there has been a considerable rise in the frequency of metabolic diseases, such as obesity, due to changes in lifestyle and resultant imbalances between energy intake and expenditure. Whey proteins are considered as potentially important components of a dietary solution to the obesity problem. However, the roles of individual whey proteins in energy balance remain poorly understood. This study investigated the effects of a high fat diet (HFD) containing alphalactalbumin (LAB), a specific whey protein, or the non-whey protein casein (CAS), on energy balance, nutrient transporters expression, and enteric microbial populations. C57BL/6J mice (n = 8) were given a HFD containing either 20% CAS or LAB as protein sources or a low-fat diet (LFD) containing CAS for 10 weeks. HFD-LAB fed mice showed a significant increase in cumulative energy intake (P=0.043), without differences in body weight, energy expenditure, locomotor activity, respiratory exchange ratio or subcutaneous and epididymal adipose tissue weight. HFD-LAB intake led to a decrease in the expression of glucose transporter glut2 in the ileum (P=0.05)and in the fatty acid transporter cd36 (P<0.001) in both ileum and jejunum. This suggests a reduction of absorption efficiency within the small intestine in the HFD-LAB group. DNA from faecal samples was used for 16S rRNA-based assessment of intestinal microbiota populations; the genera Lactobacillus, Parabacteroides and Bifidobacterium were present in significantly higher proportions in the HFD-LAB group. These data indicate a possible functional relationship between gut microbiota, intestinal nutrient transporters and energy balance, with no impact on weight gain

Draft genome sequence of the anatoxin-a producing cyanobacterium Tychonema bourrellyi B0820 isolated from the epilimnion of the deep Alpine Lake Garda

We report the draft genome sequence of strain B0820 of the cyanobacterium Tychonema bourrellyi isolated from the epilimnion of Lake Garda and assembled from a metagenome of a non-axenic culture. The strain analyzed was shown to produce anatoxin-a, a potent neurotoxin that can cause fatal intoxication in exposed organism

Depletion of the gut microbiota differentially affects the impact of whey protein on high-fat diet-induced obesity and intestinal permeability

Acknowledgement: The authors thank Fiona Crispie and Amanda Brechon from Teagasc Moorepark Food Research Centre for their assistance in 16S library preparation and sequencing. The authors thank Thomaz Bastiaanssen for generating the pictures for caecal metabolomics analysis. The authors thank Joana Pereira, Eoin Sherwin and Marina Shverer for helping with the Ussing chambers experiment. S. B. was funded under the Teagasc Walsh Fellowship scheme (grant number 2016007). K. N. N. was supported by Teagasc, Ireland and in part by a research grant from Science Foundation Ireland (SFI) under grant numbers SFI/16/BBSRC/3389 and BBSRC under the grant number BB/P009875/1 (to K.N.N. and J.R.S). Funding information Teagasc Walsh Fellowship Programme, Grant/Award Number: 2016007; Science Foundation Ireland, Grant/Award Number: SFI/16/BBSRC/3389; Biotechnology and Biological Sciences Research Council, Grant/Award Number: BB/P009875/1Peer reviewedPublisher PD

Targeted delivery of photosensitizers: efficacy and selectivity issues revealed by multifunctional ORMOSIL nanovectors in cellular systems

PEGylated and non-PEGylated ORMOSIL nanoparticles prepared by microemulsion condensation of vinyltriethoxy-silane (VTES) were investigated in detail for their micro-structure and ability to deliver photoactive agents. With respect to pure silica nanoparticles, organic modification substantially changes the microstructure and the surface properties. This in turn leads to a modulation of both the photophysical properties of embedded photosensitizers and the interaction of the nanoparticles with biological entities such as serum proteins. The flexibility of the synthetic procedure allows the rapid preparation and screening of multifunctional nanosystems for photodynamic therapy (PDT). Selective targeting of model cancer cells was tested by using folate, an integrin specific RGD peptide and anti-EGFR antibodies. Data suggest the interference of the stealth-conferring layer (PEG) with small targeting agents, but not with bulky antibodies. Moreover, we showed that selective photokilling of tumour cells may be limited even in the case of efficient targeting because of intrinsic transport limitations of active cellular uptake mechanisms or suboptimum localization

Alpine freshwater fish biodiversity assessment: an inter-calibration test for metabarcoding method set up

The analysis of environmental DNA (eDNA) by high throughput sequencing (HTS) is proving to be a promising tool for freshwater fish biodiversity assessment in Europe within the Water Framework Directive (WFD, 2000/60/EC), especially for large rivers and lakes where current fish monitoring techniques have known shortcomings. These new biomonitoring methods based on eDNA show several advantages compared to classical morphological methods. The sampling procedures are easier and cheaper and eDNA metabarcoding is non-invasive and very sensitive, allowing for the detection of traces of DNA. However, eDNA metabarcoding methods need careful standardization to make the results of different surveys comparable. The aim of the EU project Eco-AlpsWater is to test and validate molecular biodiversity monitoring tools for aquatic ecosystems (i.e., eDNA metabarcoding) to improve the traditional WFD monitoring approaches in Alpine waterbodies. To this end, an inter-calibration test was performed using fish mock community samples containing either tissue-extracted DNA, eDNA collected from aquaculture tanks and eDNA samples collected from Lake Bourget (France). Samples were analysed using a DNA metabarcoding approach, relying on the amplification and HTS of a 12S rDNA marker, in two separate laboratories, to evaluate if different laboratory and bioinformatic protocols can provide a reliable and comparable description of the fish communities in both mock and natural samples. Our results highlight good replicability of the molecular laboratory protocols for HTS and good amplification success of selected primers, providing essential information concerning the taxonomic resolution of the 12S mitochondrial marker in describing the Alpine fish communities. Interestingly, different concentrations of species DNA in the mock samples were well represented by the relative DNA reads abundance. These tests confirm the reproducibility of eDNA metabarcoding analyses for the biomonitoring of freshwater fish inhabiting Alpine and peri-Alpine lakes and river

Geometric deep learning

The goal of these course notes is to describe the main mathematical ideas behind geometric deep learning and to provide implementation details for several applications in shape analysis and synthesis, computer vision and computer graphics. The text in the course materials is primarily based on previously published work. With these notes we gather and provide a clear picture of the key concepts and techniques that fall under the umbrella of geometric deep learning, and illustrate the applications they enable. We also aim to provide practical implementation details for the methods presented in these works, as well as suggest further readings and extensions of these ideas

Patterns of geographical distribution of toxigenic cyanobacterial species and oligotypes in the perialpine lake district

Eco-AlpsWater (EAW) is a major European project co-financed by the European Regional Development Fund (ERDF) through the Interreg Alpine Space program (www.alpine-space.eu/projects/eco-alpswater). The aim of the initiative is to integrate traditional water monitoring approaches implemented in the Alpine region and in Europe (Water Framework Directive-WFD) with high throughput sequencing technologies (HTS). In this work we will present the rationale and results obtained in the Italian hydrographic network, with a focus on large subalpine lakes and cyanobacterial communities determined on samples collected in pelagic areas and rocky-shore biofilms (Lake Garda). Overall, the pelagic and biofilm samples showed distinct communities, with only a few shared species and oligotypes (amplicon sequence variants) mostly belonging to the Chroococcales. One of the most widespread pelagic species in the Italian district and the whole Alpine region was Planktothrix rubescens. In contrast, Tychonema bourrellyi showed consistent populations only in the southern subalpine lake district. The normalized DNA sequence abundances of these two species were highly correlated with the microcystin and anatoxin-a concentrations, demonstrating a high consistency of the results obtained by HTS and metabolomic profiling, and a high ability of HTS to predict the toxigenic potential due to the production of hepatotoxins and neurotoxins in inland waters

Whey protein effects on energy balance link the intestinal mechanisms of energy absorption with adiposity and hypothalamic neuropeptide gene expression

peer-reviewedWe tested the hypothesis that dietary whey protein isolate (WPI) affects the intestinal mechanisms related to energy absorption and that the resulting energy deficit is compensated by changes in energy balance to support growth. C57BL/6 mice were provided a diet enriched with WPI with varied sucrose content, and the impact on energy balance-related parameters was investigated. As part of a high-sucrose diet, WPI reduced the hypothalamic expression of pro-opiomelanocortin gene expression and increased energy intake. The energy expenditure was unaffected, but epididymal weight was reduced, indicating an energy loss. Notably, there was a reduction in the ileum gene expression for amino acid transporter SLC6a19, glucose transporter 2, and fatty acid transporter 4. The composition of the gut microbiota also changed, where Firmicutes were reduced. The above changes indicated reduced energy absorption through the intestine. We propose that this mobilized energy in the adipose tissue and caused hypothalamic changes that increased energy intake, acting to counteract the energy deficit arising in the intestine. Lowering the sucrose content in the WPI diet increased energy expenditure. This further reduced epididymal weight and plasma leptin, whereupon hypothalamic ghrelin gene expression and the intestinal weight were both increased. These data suggest that when the intestine-adipose-hypothalamic pathway is subjected to an additional energy loss (now in the adipose tissue), compensatory changes attempt to assimilate more energy. Notably, WPI and sucrose content interact to enable the component mechanisms of this pathway