Nitrogen transport in the orchid mycorrhizal symbiosis - further evidence for a mutualistic association.

Mycorrhizas are symbioses integral to the health of plant-based ecosystems (Smith & Read, 2008). In a typical mycorrhizal association, fungi in, or on, plant roots pass soil-acquired inorganic nutrients and water to the plant host. In return, the host transfers excess photosynthate to the fungus

Identification of IGF1, SLC4A4, WWOX, and SFMBT1 as Hypertension Susceptibility Genes in Han Chinese with a Genome-Wide Gene-Based Association Study

Hypertension is a complex disorder with high prevalence rates all over the world. We conducted the first genome-wide gene-based association scan for hypertension in a Han Chinese population. By analyzing genome-wide single-nucleotide-polymorphism data of 400 matched pairs of young-onset hypertensive patients and normotensive controls genotyped with the Illumina HumanHap550-Duo BeadChip, 100 susceptibility genes for hypertension were identified and also validated with permutation tests. Seventeen of the 100 genes exhibited differential allelic and expression distributions between patient and control groups. These genes provided a good molecular signature for classifying hypertensive patients and normotensive controls. Among the 17 genes, IGF1, SLC4A4, WWOX, and SFMBT1 were not only identified by our gene-based association scan and gene expression analysis but were also replicated by a gene-based association analysis of the Hong Kong Hypertension Study. Moreover, cis-acting expression quantitative trait loci associated with the differentially expressed genes were found and linked to hypertension. IGF1, which encodes insulin-like growth factor 1, is associated with cardiovascular disorders, metabolic syndrome, decreased body weight/size, and changes of insulin levels in mice. SLC4A4, which encodes the electrogenic sodium bicarbonate cotransporter 1, is associated with decreased body weight/size and abnormal ion homeostasis in mice. WWOX, which encodes the WW domain-containing protein, is related to hypoglycemia and hyperphosphatemia. SFMBT1, which encodes the scm-like with four MBT domains protein 1, is a novel hypertension gene. GRB14, TMEM56 and KIAA1797 exhibited highly significant differential allelic and expressed distributions between hypertensive patients and normotensive controls. GRB14 was also found relevant to blood pressure in a previous genetic association study in East Asian populations. TMEM56 and KIAA1797 may be specific to Taiwanese populations, because they were not validated by the two replication studies. Identification of these genes enriches the collection of hypertension susceptibility genes, thereby shedding light on the etiology of hypertension in Han Chinese populations

Genetic polymorphisms of the RAS-cytokine pathway and chronic kidney disease

Chronic kidney disease (CKD) in children is irreversible. It is associated with renal failure progression and atherosclerotic cardiovascular (CV) abnormalities. Nearly 60% of children with CKD are affected since birth with congenital or inherited kidney disorders. Preliminary evidence primarily from adult CKD studies indicates common genetic risk factors for CKD and atherosclerotic CV disease. Although multiple physiologic pathways share common genes for CKD and CV disease, substantial evidence supports our attention to the renin angiotensin system (RAS) and the interlinked inflammatory cascade because they modulate the progressions of renal and CV disease. Gene polymorphisms in the RAS-cytokine pathway, through altered gene expression of inflammatory cytokines, are potential factors that modulate the rate of CKD progression and CV abnormalities in patients with CKD. For studying such hypotheses, the cooperative efforts among scientific groups and the availability of robust and affordable technologies to genotype thousands of single nucleotide polymorphisms (SNPs) across the genome make genome-wide association studies an attractive paradigm for studying polygenic diseases such as CKD. Although attractive, such studies should be interpreted carefully, with a fundamental understanding of their potential weaknesses. Nevertheless, whole-genome association studies for diabetic nephropathy and future studies pertaining to other types of CKD will offer further insight for the development of targeted interventions to treat CKD and associated atherosclerotic CV abnormalities in the pediatric CKD population

An introduction to Caladenia R.Br. Australasias jewel among terrestrial orchids

Caladenia is a genus of more than 250 species of geophytic orchids in the Tribe Diurideae endemic to the Australasian Region. The genus in this broad sense has an exceptional diversity of insect pollination adaptations among its colourfully adorned species, from food-rewarding generalists to specialists achieving pollination by sexual deception of male thynnid wasps. The exploration of diversity in Caladenia involves many of the great names in the foundation of Australasian plant systematics, as well as reflecting a remarkable second phase of discovery and description over the past three decades. Molecular phylogenetics has greatly clarified relationships of Caladenia and established six major clades within the genus. Some researchers regard these clades as genera themselves, whereas they are treated as subgenera herein to maximise nomenclatural stability and information retrieval. More work is needed to adequately document relationships within each of these clades, and disputed matters of typification greatly influence nomenclature applied to many species if the six clades are recognised as genera. Given the relatively recent and ongoing discovery of so many new species in Caladenia, the biology of these orchids is only now being documented comprehensively. Significant advances in pollination ecology, mycorrhizal studies, horticulture and conservation biology are emerging that highlight the extraordinary ecological sensitivity and conservation vulnerability of the genus. Indeed, the high species number and complex biotic connections have resulted in no other genus of terrestrial orchids possessing such a large number of rare and threatened taxa. Some of this rich body of new data is presented by a diverse range of laboratories and researchers in this special issue. © CSIRO 2009