Bioprocessing: Prospects for space electrophoresis

The basic principles of electrophoresis are reviewed in light of its past contributions to biology and medicine. The near-zero gravity environment of orbiting spacecraft may present some unique advantages for a variety of processes, by abolishing the major source of convection in fluids. As the ground-based development of electrophoresis was heavily influenced by the need to circumvent the effects of gravity, this process should be a prime candidate for space operation. Nevertheless, while a space facility for electrophoresis may overcome the limitations imposed by gravity, it will not necessarily overcome all problems inherent in electrophoresis. These are, mainly, electroosmosis and the dissipation of the heat generated by the electric field. The NASA program has already led to excellent coatings to prevent electroosmosis, while the need for heat dissipation will continue to impose limits on the actual size of equipment. It is also not excluded that, once the dominant force of gravity is eliminated, disturbances in fluid stability may originate from weaker forces, such as surface tension

Hormone purification by isoelectric focusing in space

The objective of the program was the definition and development of optimal methods for electrophoretic separations in microgravity. The approach is based on a triad consisting of ground based experiments, mathematical modeling and experiments in microgravity. Zone electrophoresis is a rate process, where separation is achieved in uniform buffers on the basis of differences in electrophoretic mobilities. Optimization and modeling of continuous flow electrophoresis mainly concern the hydrodynamics of the flow process, including gravity dependent fluid convection due to density gradients and gravity independent electroosmosis. Optimization of focusing requires a more complex model describing the molecular transport processes involved in electrophoresis of interacting systems. Three different focusing instruments were designed, embodying novel principles of fluid stabilization. Fluid stability was achieved by: (1) flow streamlining by means of membrane elements in combination with rapid fluid recycling; (2) apparatus rotation in combination with said membrane elements; and (3) shear stress induced by rapid recycling through a narrow gap channel

Opportunities for space bioprocessing

The need for improved purification technologies, the role of electrophoresis, and isoelectric focusing are discussed in the context of space bioprocessing

The structure of fluids with impurities

The influence of dilute impurities on the structure of a fluid solvent is investigated theoretically. General arguments, which do not rely on particular models, are used to derive an extension of the Ornstein-Zernike form for the solvent structure factor at small scattering vectors. It is shown that dilute impurities can influence the solvent structure only if they are composed of ions with significantly different sizes. Non-ionic impurities or ions of similar size are shown to not alter the solvent structure qualitatively. This picture is compatible with available experimental data. The derived form of the solvent structure factor is expected to be useful to infer information on the impurity-solvent interactions form measured scattering intensities

How occasional backstepping can speed up a processive motor protein

Fueled by the hydrolysis of ATP, the motor protein kinesin literally walks on two legs along the biopolymer microtubule. The number of accidental backsteps that kinesin takes appears to be much larger than what one would expect given the amount of free energy that ATP hydrolysis makes available. This is puzzling as more than a billion years of natural selection should have optimized the motor protein for its speed and efficiency. But more backstepping allows for the production of more entropy. Such entropy production will make free energy available. With this additional free energy, the catalytic cycle of the kinesin can be speeded up. We show how measured backstep percentages represent an optimum at which maximal net forward speed is achieved.Comment: LaTeX, 5 pages, 3 figure

Bulk and interfacial properties of binary hard-platelet fluids

Interfaces between demixed fluid phases of binary mixtures of hard platelets are investigated using density-functional theory. The corresponding excess free energy functional is calculated within a fundamental measure theory adapted to the Zwanzig model, in which the orientations of the particles of rectangular shape are restricted to three orthogonal orientations. Density and orientational order parameter profiles at interfaces between coexisting phases as well as the interfacial tension are determined. A density inversion, oscillatory density profiles, and a Fisher-Widom line have been found in a mixture of large thin and small thick platelets. The lowest interfacial tension corresponds to the mean bulk orientation of the platelets being parallel to the interface. For a mixture of large and small thin platelets, complete wetting of an isotropic-nematic interface by a second nematic phase is found.Comment: 7 pages, 6 figure

Phase behavior of ionic liquid crystals

Bulk properties of ionic liquid crystals are investigated using density functional theory. The liquid crystal molecules are represented by ellipsoidal particles with charges located in their center or at their tails. Attractive interactions are taken into account in terms of the Gay-Berne pair potential. Rich phase diagrams involving vapor, isotropic and nematic liquid, as well as smectic phases are found. The dependence of the phase behavior on various parameters such as the length of the particles and the location of charges on the particles is studied

Relaxation dynamics in fluids of platelike colloidal particles

The relaxation dynamics of a model fluid of platelike colloidal particles is investigated by means of a phenomenological dynamic density functional theory. The model fluid approximates the particles within the Zwanzig model of restricted orientations. The driving force for time-dependence is expressed completely by gradients of the local chemical potential which in turn is derived from a density functional -- hydrodynamic interactions are not taken into account. These approximations are expected to lead to qualitatively reliable results for low densities as those within the isotropic-nematic two-phase region. The formalism is applied to model an initially spatially homogeneous stable or metastable isotropic fluid which is perturbed by switching a two-dimensional array of Gaussian laser beams. Switching on the laser beams leads to an accumulation of colloidal particles in the beam centers. If the initial chemical potential and the laser power are large enough a preferred orientation of particles occurs breaking the symmetry of the laser potential. After switching off the laser beams again the system can follow different relaxation paths: It either relaxes back to the homogeneous isotropic state or it forms an approximately elliptical high-density core which is elongated perpendicular to the dominating orientation in order to minimize the surface free energy. For large supersaturations of the initial isotropic fluid the high-density cores of neighboring laser beams of the two-dimensional array merge into complex superstructures.Comment: low-resolution figures due to file size restrictions, revised versio

Advances in Engineering the Fly Genome with the CRISPR-Cas System.

Drosophila has long been a premier model for the development and application of cutting-edge genetic approaches. The CRISPR-Cas system now adds the ability to manipulate the genome with ease and precision, providing a rich toolbox to interrogate relationships between genotype and phenotype, to delineate and visualize how the genome is organized, to illuminate and manipulate RNA, and to pioneer new gene drive technologies. Myriad transformative approaches have already originated from the CRISPR-Cas system, which will likely continue to spark the creation of tools with diverse applications. Here, we provide an overview of how CRISPR-Cas gene editing has revolutionized genetic analysis in Drosophila and highlight key areas for future advances

Hormone purification by isoelectric focusing in space

The performance of a ground-prototype of an apparatus for recycling isoelectric focusing was evaluated in an effort to provide technology for large scale purification of peptide hormones, proteins, and other biologicals. Special emphasis was given to the effects of gravity on the function of the apparatus and to the determination of potential advantages deriveable from its use in a microgravity environment. A theoretical model of isoelectric focusing sing chemically defined buffer systems for the establishment of the pH gradients was developed. The model was transformed to a form suitable for computer simulations and was used extensively for the design of experimental buffers