Strategy-based instruction: Lessons Learned in Teaching the Effective and Efficient Use of Computer Applications

________________________________________________________________________ Numerous studies have shown that many users do not acquire the knowledge necessary for the effective and efficient use of computer applications such as spreadsheets and web-authoring tools. While many cognitive, cultural, and social reasons have been offered to explain this phenomenon, there have been few systematic attempts to address it. This article describes how we identified a framework to organize effective and efficient strategies to use computer applications, and used an approach called strategy-based instruction to teach those strategies over five years to almost 400 students. Controlled experiments demonstrated that the instructional approach (1) enables students to learn strategies without harming command knowledge, (2) benefits students from technical and non-technical majors, an

Strategy-based instruction: Lessons Learned in Teaching the Effective and Efficient Use of Computer Applications

________________________________________________________________________ Numerous studies have shown that many users do not acquire the knowledge necessary for the effective and efficient use of computer applications such as spreadsheets and web-authoring tools. While many cognitive, cultural, and social reasons have been offered to explain this phenomenon, there have been few systematic attempts to address it. This article describes how we identified a framework to organize effective and efficient strategies to use computer applications, and used an approach called strategy-based instruction to teach those strategies over five years to almost 400 students. Controlled experiments demonstrated that the instructional approach (1) enables students to learn strategies without harming command knowledge, (2) benefits students from technical and non-technical majors, an

Network analysis of genes regulated in renal diseases: implications for a molecular-based classification

Abstract Background Chronic renal diseases are currently classified based on morphological similarities such as whether they produce predominantly inflammatory or non-inflammatory responses. However, such classifications do not reliably predict the course of the disease and its response to therapy. In contrast, recent studies in diseases such as breast cancer suggest that a classification which includes molecular information could lead to more accurate diagnoses and prediction of treatment response. This article describes how we extracted gene expression profiles from biopsies of patients with chronic renal diseases, and used network visualizations and associated quantitative measures to rapidly analyze similarities and differences between the diseases. Results The analysis revealed three main regularities: (1) Many genes associated with a single disease, and fewer genes associated with many diseases. (2) Unexpected combinations of renal diseases that share relatively large numbers of genes. (3) Uniform concordance in the regulation of all genes in the network. Conclusion The overall results suggest the need to define a molecular-based classification of renal diseases, in addition to hypotheses for the unexpected patterns of shared genes and the uniformity in gene concordance. Furthermore, the results demonstrate the utility of network analyses to rapidly understand complex relationships between diseases and regulated genes.http://deepblue.lib.umich.edu/bitstream/2027.42/112463/1/12859_2009_Article_3354.pd

Prognostic Performance of Peripheral Blood Biomarkers in Identifying Seropositive Individuals at Risk of Developing Clinically Symptomatic Chagas Cardiomyopathy

Biomarkers for prognosis-based detection of Trypanosoma cruzi-infected patients presenting no clinical symptoms to cardiac Chagas disease (CD) are not available. In this study, we examined the performance of seven biomarkers in prognosis and risk of symptomatic CD development. T.cruzi-infected patients clinically asymptomatic (C/A; n = 30) or clinically symptomatic (C/S; n = 30) for cardiac disease and humans who were noninfected and healthy (N/H; n = 24) were enrolled (1 − β = 80%, α = 0.05). Serum, plasma, and peripheral blood mononuclear cells (PBMCs) were analyzed for heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1), vimentin, poly(ADP-ribose) polymerase (PARP1), 8-hydroxy-2-deoxyguanosine (8-OHdG), copeptin, endostatin, and myostatin biomarkers by enzyme-linked immunosorbent assay (ELISA) and Western blotting. Secreted hnRNPA1, vimentin, PARP1, 8-OHdG, copeptin, and endostatin were increased by 1.4- to 7.0-fold in CD subjects versus N/H subjects (P < 0.001) and showed excellent predictive value in identifying the occurrence of infection (area under the receiver operating characteristic [ROC] curve [AUC], 0.935 to 0.999). Of these, vimentin, 8-OHdG, and copeptin exhibited the best performance in prognosis of C/S (versus C/A) CD, determined by binary logistic regression analysis with the Cox and Snell test (R2C&S = 0.492 to 0.688). A decline in myostatin and increase in hnRNPA1 also exhibited good predictive value in identifying C/S and C/A CD status, respectively. Furthermore, circulatory 8-OHdG (Wald x2 = 15.065), vimentin (Wald x2 = 14.587), and endostatin (Wald x2 = 17.902) levels exhibited a strong association with changes in left ventricular ejection fraction and diastolic diameter (P = 0.001) and predicted the risk of cardiomyopathy development in CD patients. We have identified four biomarkers (vimentin, 8-OHdG, copeptin, and endostatin) that offer excellent value in prognosis and risk of symptomatic CD development. Decline in these four biomarkers and increase in hnRNPA1 wouldbeuseful in monitoring the efficacy of therapies and vaccines in halting CD. IMPORTANCE There is a lack of validated biomarkers for diagnosis of T. cruzi-infected individuals at risk of developing heart disease. Of the seven potential biomarkers that were screened, vimentin, 8-OHdG, copeptin, and endostatin exhibited excellent performance in distinguishing the clinical severity of Chagas disease. A decline in these four biomarkers can also be used for monitoring the therapeutic responses of infected patients to established or newly developed drugs and vaccines and precisely inform the patients about their progress. These biomarkers can easily be screened using the readily available plasma/serum samples in the clinical setting by an ELISA that is inexpensive, fast, and requires low-tech resources at the facility, equipment, and personnel levels.Fil: Choudhuri, Subhadip. University of Texas Medical Branch; Estados UnidosFil: Bhavnani, Suresh K.. Institute For Human Infections And Immunity ; University Of Texas Medical Branch; . University of Texas Medical Branch; Estados UnidosFil: Zhang, Weibin. University of Texas Medical Branch; Estados UnidosFil: Botelli, Valentina. Gobierno de la Provincia de Salta. Hospital San Bernardo.; ArgentinaFil: Barrientos, Natalia Mariel. Gobierno de la Provincia de Salta. Hospital San Bernardo.; ArgentinaFil: lñiguez, Facundo. Gobierno de la Provincia de Salta. Hospital San Bernardo.; ArgentinaFil: Zago, María Paola. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta. Instituto de Patología Experimental. Universidad Nacional de Salta. Facultad de Ciencias de la Salud. Instituto de Patología Experimental; ArgentinaFil: Garg, Nisha Jain. Institute For Human Infections And Immunity ; University Of Texas Medical Branch

Why is it difficult to find comprehensive information? Implications of information scatter for search and design

The rapid development of Web sites providing extensive coverage of a topic, coupled with the development of powerful search engines (designed to help users find such Web sites), suggests that users can easily find comprehensive information about a topic. In domains such as consumer healthcare, finding comprehensive information about a topic is critical as it can improve a patient's judgment in making healthcare decisions, and can encourage higher compliance with treatment. However, recent studies show that despite using powerful search engines, many healthcare information seekers have difficulty finding comprehensive information even for narrow healthcare topics because the relevant information is scattered across many Web sites. To date, no studies have analyzed how facts related to a search topic are distributed across relevant Web pages and Web sites. In this study, the distribution of facts related to five common healthcare topics across high-quality sites is analyzed, and the reasons underlying those distributions are explored. The analysis revealed the existence of few pages that had many facts, many pages that had few facts, and no single page or site that provided all the facts. While such a distribution conforms to other information-related phenomena, a deeper analysis revealed that the distributions were caused by a trade-off between depth and breadth, leading to the existence of general, specialized, and sparse pages. Furthermore, the results helped to make explicit the knowledge needed by searchers to find comprehensive healthcare information, and suggested the motivation to explore distribution-conscious approaches for the development of future search systems, search interfaces, Web page designs, and training.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/48701/1/20189_ftp.pd

Scatter networks: a new approach for analysing information scatter

Information on any given topic is often scattered across the Web. Previously this scatter has been characterized through the inequality of distribution of facts (i.e. pieces of information) across webpages. Such an approach conceals how specific facts (e.g. rare facts) occur in specific types of pages (e.g. fact-rich pages). To reveal such regularities, we construct bipartite networks, consisting of two types of vertices: the facts contained in webpages and the webpages themselves. Such a representation enables the application of a series of network analysis techniques, revealing structural features such as connectivity, robustness and clustering. Not only does network analysis yield new insights into information scatter, but we also illustrate the benefit of applying new and existing analysis techniques directly to a bipartite network as opposed to its one-mode projection. We discuss the implications of each network feature to the users’ ability to find comprehensive information online. Finally, we compare the bipartite graph structure of webpages and facts with the hyperlink structure between the webpages.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/58170/2/njp7_7_231.pd

Discovering hidden relationships between renal diseases and regulated genes through 3D network visualizations

Abstract Background In a recent study, two-dimensional (2D) network layouts were used to visualize and quantitatively analyze the relationship between chronic renal diseases and regulated genes. The results revealed complex relationships between disease type, gene specificity, and gene regulation type, which led to important insights about the underlying biological pathways. Here we describe an attempt to extend our understanding of these complex relationships by reanalyzing the data using three-dimensional (3D) network layouts, displayed through 2D and 3D viewing methods. Findings The 3D network layout (displayed through the 3D viewing method) revealed that genes implicated in many diseases (non-specific genes) tended to be predominantly down-regulated, whereas genes regulated in a few diseases (disease-specific genes) tended to be up-regulated. This new global relationship was quantitatively validated through comparison to 1000 random permutations of networks of the same size and distribution. Our new finding appeared to be the result of using specific features of the 3D viewing method to analyze the 3D renal network. Conclusions The global relationship between gene regulation and gene specificity is the first clue from human studies that there exist common mechanisms across several renal diseases, which suggest hypotheses for the underlying mechanisms. Furthermore, the study suggests hypotheses for why the 3D visualization helped to make salient a new regularity that was difficult to detect in 2D. Future research that tests these hypotheses should enable a more systematic understanding of when and how to use 3D network visualizations to reveal complex regularities in biological networks.http://deepblue.lib.umich.edu/bitstream/2027.42/112972/1/13104_2010_Article_700.pd