Splitting of topological charge pumping in an interacting two-component fermionic Rice-Mele Hubbard model

A Thouless pump transports an integer amount of charge when pumping adiabatically around a singularity. We study the splitting of such a critical point into two separate critical points by adding a Hubbard interaction. Furthermore, we consider extensions to a spinful Rice-Mele model, namely a staggered magnetic field or an Ising-type spin coupling, further reducing the spin symmetry. The resulting models additionally allow for the transport of a single charge in a two-component system of spinful fermions, whereas in the absence of interactions, zero or two charges are pumped. In the SU(2)-symmetric case, the ionic Hubbard model is visited once along pump cycles that enclose a single singularity. Adding a staggered magnetic field additionally transports an integer amount of spin while the Ising term realizes a pure charge pump. We employ real-time simulations in finite and infinite systems to calculate the adiabatic charge and spin transport, complemented by the analysis of gaps and the many-body polarization to confirm the adiabatic nature of the pump. The resulting charge pumps are expected to be measurable in finite-pumping speed experiments in ultra-cold atomic gases, for which the SU(2) invariant version is the most promising path. We discuss the implications of our results for a related quantum-gas experiment by Walter et al. [arXiv:2204.06561].Comment: 12 pages, 7 figures. Revised version essentially as published. Data is partially available as ancillary file

Electrochemical Impedance Spectroscopy Based Biosensors: Mechanistic Principles, Analytical Examples and Challenges towards Commercialization for Assays of Protein Cancer Biomarkers

Impedimetric affinity biosensors are, without any doubt, among the most sensitive analytical devices available, offering low limits of detection and wide linear response ranges. There are, however, only a few papers detailing the application of impedimetric biosensors for the analysis of clinically relevant samples with due clinical performance. The fact that these devices have not found their way to any commercial or clinical use to date might be surprising, since an electrochemical assay platform based on portable potentiostats is a success story for monitoring a range of clinical parameters such as ions, haematological indicators and glucose. This review discusses the reasons behind this discrepancy and addresses the barriers to be overcome in order to achieve the point-of-care diagnostics using such devices for detection of protein oncomarkers approved by FDA. The final part of the review covers the most recent progress in the area.The financial support received from the Slovak Scientific Grant Agency VEGA 2/0137/18 and 2/0090/16 and the Slovak Research and Development Agency APVV 17-0300 and APW-15-0227 is acknowledged. The research received funding from the European Research Council (no. 311532). This publication is the result of the project implementation: Centre for materials, layers and systems for applications and chemical processes under extreme conditions - Stage I, ITMS No.: 26240120007, supported by the ERDF

Genetic heterogeneity in Italian families with IgA nephropathy: suggestive linkage for two novel IgA nephropathy loci.

IgA nephropathy (IgAN) is the most common glomerulonephritis worldwide, but its etiologic mechanisms are still poorly understood. Different prevalences among ethnic groups and familial aggregation, together with an increased familial risk, suggest important genetic influences on its pathogenesis. A locus for familial IgAN, called "IGAN1," on chromosome 6q22-23 has been described, without the identification of any responsible gene. The partners of the European IgAN Consortium organized a second genomewide scan in 22 new informative Italian multiplex families. A total of 186 subjects (59 affected and 127 unaffected) were genotyped and were included in a two-stage genomewide linkage analysis. The regions 4q26-31 and 17q12-22 exhibited the strongest evidence of linkage by nonparametric analysis (best P=.0025 and .0045, respectively). These localizations were also supported by multipoint parametric analysis, in which peak LOD scores of 1.83 ( alpha =0.50) and 2.56 ( alpha =0.65) were obtained using the affected-only dominant model, and by allowance for the presence of genetic heterogeneity. Our results provide further evidence for genetic heterogeneity among families with IgAN. Evidence of linkage to multiple chromosomal regions is consistent with both an oligo/polygenic and a multiple-susceptibility-gene model for familial IgAN, with small or moderate effects in determining the pathological phenotype. Although we identified new candidate regions, replication studies are required to confirm the genetic contribution to familial IgA

Escherichia coli Bacteriocins: Antimicrobial Efficacy and Prevalence among Isolates from Patients with Bacteraemia

Bacteriocins are antimicrobial peptides generally active against bacteria closely related to the producer. Escherichia coli produces two types of bacteriocins, colicins and microcins. The in vitro efficacy of isolated colicins E1, E6, E7, K and M, was assessed against Escherichia coli strains from patients with bacteraemia of urinary tract origin. Colicin E7 was most effective, as only 13% of the tested strains were resistant. On the other hand, 32%, 33%, 43% and 53% of the tested strains exhibited resistance to colicins E6, K, M and E1. Moreover, the inhibitory activity of individual colicins E1, E6, E7, K and M and combinations of colicins K, M, E7 and E1, E6, E7, K, M were followed in liquid broth for 24 hours. Resistance against individual colicins developed after 9 hours of treatment. On the contrary, resistance development against the combined action of 5 colicins was not observed. One hundred and five E. coli strains from patients with bacteraemia were screened by PCR for the presence of 5 colicins and 7 microcins. Sixty-six percent of the strains encoded at least one bacteriocin, 43% one or more colicins, and 54% one or more microcins. Microcins were found to co-occur with toxins, siderophores, adhesins and with the Toll/Interleukin-1 receptor domain-containing protein involved in suppression of innate immunity, and were significantly more prevalent among strains from non-immunocompromised patients. In addition, microcins were highly prevalent among non-multidrug-resistant strains compared to multidrug-resistant strains. Our results indicate that microcins contribute to virulence of E. coli instigating bacteraemia of urinary tract origin

Effect of disorder on topological charge pumping in the Rice-Mele model

Recent experiments with ultracold quantum gases have successfully realized integer-quantized topological charge pumping in optical lattices. Motivated by this progress, we study the effects of static disorder on topological Thouless charge pumping. We focus on the half-filled Rice-Mele model of free spinless fermions and consider random diagonal disorder. In the instantaneous basis, we compute the polarization, the entanglement spectrum, and the local Chern marker. As a first main result, we conclude that the space-integrated local Chern marker is best suited for a quantitative determination of topological transitions in a disordered system. In the time-dependent simulations, we use the time-integrated current to obtain the pumped charge in slowly periodically driven systems. As a second main result, we observe and characterize a disorder-driven breakdown of the quantized charge pump. There is an excellent agreement between the static and the time-dependent ways of computing the pumped charge. The topological transition occurs well in the regime where all states are localized on the given system sizes and is therefore not tied to a delocalization-localization transition of Hamiltonian eigenstates. For individual disorder realizations, the breakdown of the quantized pumping occurs for parameters where the spectral bulk gap inherited from the band gap of the clean system closes, leading to a globally gapless spectrum. As a third main result and with respect to the analysis of finite-size systems, we show that the disorder average of the bulk gap severely overestimates the stability of quantized pumping. A much better estimate is the typical value of the distribution of energy gaps, also called mode of the distribution