4,137 research outputs found

    Wall-liquid and wall-crystal interfacial free energies via thermodynamic integration: A molecular dynamics simulation study

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    A method is proposed to compute the interfacial free energy of a Lennard-Jones system in contact with a structured wall by molecular dynamics simulation. Both the bulk liquid and bulk face-centered-cubic crystal phase along the (111) orientation are considered. Our approach is based on a thermodynamic integration scheme where first the bulk Lennard-Jones system is reversibly transformed to a state where it interacts with a structureless flat wall. In a second step, the flat structureless wall is reversibly transformed into an atomistic wall with crystalline structure. The dependence of the interfacial free energy on various parameters such as the wall potential, the density and orientation of the wall is investigated. The conditions are indicated under which a Lennard-Jones crystal partially wets a flat wall.Comment: 15 pages, 11 figure

    Airway expression of Transient Receptor Potential (TRP) Vanniloid-1 and Ankyrin-1 channels is not increased in patients with Idiopathic Pulmonary Fibrosis

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    Dry cough is a common symptom described in patients with Idiopathic Pulmonary Fibrosis (IPF) and impairs quality of life. The exact mechanisms causing cough in IPF remain unclear, however evidence suggests altered cough neurophysiology and sensitisation plays a role; IPF patients have an enhanced cough reflex sensitivity to inhaled capsaicin. The Transient Receptor Potential Vanniloid-1 channel (TRPV-1) has a role in the cough reflex and airway expression is increased in patients with chronic cough. The Ankyrin-1 receptor (TRPA-1) is often coexpressed. It was hypothesised that, like chronic cough patients, IPF patients have increased airway TRP receptor expression. Bronchial biopsies were obtained from 16 patients with IPF, 11 patients with idiopathic chronic cough and 8 controls without cough. All other causes of cough were rigorously excluded. Real-time quantitative Polymerase Chain Reaction was used to detect TRPV-1 and TRPA-1 mRNA expression with Immunohistochemistry demonstrating protein expression. Mean TRPV-1 and TRPA-1 gene expression was higher in IPF patients compared with controls, but the difference did not reach statistical significance. Immunostaining supported these findings. This study suggests that structural up-regulation of central airway TRP receptors is not the key mechanism for cough in IPF patients. It is probable that IPF cough results from altered neuronal sensitivity at multiple levels of the cough pathway

    Distribution and characteristics of Infrared Dark Clouds using genetic forward modelling

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    Infrared Dark Clouds (IRDCs) are dark clouds seen in silhouette in mid-infrared surveys. They are thought to be the birthplace of massive stars, yet remarkably little information exists on the properties of the population as a whole (e.g. mass spectrum, spatial distribution). Genetic forward modelling is used along with the Two Micron All Sky Survey and the Besancon Galactic model to deduce the three dimensional distribution of interstellar extinction towards previously identified IRDC candidates. This derived dust distribution can then be used to determine the distance and mass of IRDCs, independently of kinematic models of the Milky Way. Along a line of sight that crosses an IRDC, the extinction is seen to rise sharply at the distance of the cloud. Assuming a dust to gas ratio, the total mass of the cloud can be estimated. The method has been successfully applied to 1259 IRDCs, including over 1000 for which no distance or mass estimate currently exists. The IRDCs are seen to lie preferentially along the spiral arms and in the molecular ring of the Milky Way, reinforcing the idea that they are the birthplace of massive stars. Also, their mass spectrum is seen to follow a power law with an index of -1.75 +/- 0.06, steeper than giant molecular clouds in the inner Galaxy, but comparable to clumps in GMCs. This slope suggests that the IRDCs detected using the present method are not gravitationally bound, but are rather the result of density fluctuations induced by turbulence.Comment: 15 pages, 9 figures, accepted for publication in Ap

    Curvature Dependence of Surface Free Energy of Liquid Drops and Bubbles: A Simulation Study

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    We study the excess free energy due to phase coexistence of fluids by Monte Carlo simulations using successive umbrella sampling in finite LxLxL boxes with periodic boundary conditions. Both the vapor-liquid phase coexistence of a simple Lennard-Jones fluid and the coexistence between A-rich and B-rich phases of a symmetric binary (AB) Lennard-Jones mixture are studied, varying the density rho in the simple fluid or the relative concentration x_A of A in the binary mixture, respectively. The character of phase coexistence changes from a spherical droplet (or bubble) of the minority phase (near the coexistence curve) to a cylindrical droplet (or bubble) and finally (in the center of the miscibility gap) to a slab-like configuration of two parallel flat interfaces. Extending the analysis of M. Schrader, P. Virnau, and K. Binder [Phys. Rev. E 79, 061104 (2009)], we extract the surface free energy gamma (R) of both spherical and cylindrical droplets and bubbles in the vapor-liquid case, and present evidence that for R -> Infinity the leading order (Tolman) correction for droplets has sign opposite to the case of bubbles, consistent with the Tolman length being independent on the sign of curvature. For the symmetric binary mixture the expected non-existence of the Tolman length is confirmed. In all cases {and for a range of radii} R relevant for nucleation theory, gamma(R) deviates strongly from gamma (Infinity) which can be accounted for by a term of order gamma(Infinity)/gamma(R)-1 ~ 1/R^2. Our results for the simple Lennard-Jones fluid are also compared to results from density functional theory and we find qualitative agreement in the behavior of gamma(R) as well as in the sign and magnitude of the Tolman length.Comment: 25 pages, submitted to J. Chem. Phy

    Convection in galaxy-cluster plasmas driven by active galactic nuclei and cosmic-ray buoyancy

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    Turbulent heating may play an important role in galaxy-cluster plasmas, but if turbulent heating is to balance radiative cooling in a quasi-steady state, some mechanism must set the turbulent velocity to the required value. This paper explores one possible regulating mechanism associated with an active galactic nucleus at cluster center. A steady-state model for the intracluster medium is presented in which radiative cooling is balanced by a combination of turbulent heating and thermal conduction. The turbulence is generated by convection driven by the buoyancy of cosmic rays produced by a central radio source. The cosmic-ray luminosity is powered by the accretion of intracluster plasma onto a central black hole. The model makes the rather extreme assumption that the cosmic rays and thermal plasma are completely mixed. Although the intracluster medium is convectively unstable near cluster center in the model solutions, the specific entropy of the thermal plasma still increases outwards because of the cosmic-ray modification to the stability criterion. The model provides a self-consistent calculation of the turbulent velocity as a function of position, but fails to reproduce the steep central density profiles observed in clusters. The principal difficulty is that in order for the fully mixed intracluster medium to become convectively unstable, the cosmic-ray pressure must become comparable to or greater than the thermal pressure within the convective region. The large cosmic-ray pressure gradient then provides much of the support against gravity, reducing the thermal pressure gradient near cluster center and decreasing the central plasma density gradient. A more realistic AGN-feedback model of intracluster turbulence in which relativistic and thermal plasmas are only partially mixed may have greater success.Comment: version 2: minor changes in wordin
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