Potential of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) for the identification of freshwater zooplankton: a pilot study with three Eudiaptomus (Copepoda: Diaptomidae) species

The accurate identification of individuals in zooplankton samples is a crucial step in many plankton studies. Up to now, this has been done primarily by microscopic analysis of morphological characters, and new molecular methodologies are still relatively rarely applied. Another promising technology is matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), which has had a major impact in applied and systematic microbiology, where it is used for routine high throughput identification of bacteria and fungi. For the present study, we developed a protocol for the rapid acquisition of mass spectra from whole individual copepods. The final protocol enabled us to obtain mass spectra with more than 100 distinct peaks in the mass range of 2000-20 000 Da. A comparison of the mass spectra of three species of Eudiaptomus showed that they could all be clearly discriminated, whereas the mass spectra of different developmental stages and sexes of each particular species were highly similar. Further, a discrimination of con-specific individuals from different habitats was achieved, at least partly, even without extensive optimization of the analytical and statistical procedures. These results indicate the feasibility of identifying copepods by a rapid and simple MALDI-TOF MS analysis, e.g. for population ecology studie

Utilisation d'un SIRS nomade pour gérer en temps réel le réseau électrique de Romande Energie

Dans le cadre d'une collaboration avec Romande Energie, l'Institut de Géomatique de l'EPFL a réalisé une série d'études sur les processus d'acquisition et de gestion de l'information à référence spatiale. C'est dans ce contexte que s'est déroulé ce travail sur l'utilisation d'un SIRS (Système d'information à référence spatiale) nomade pour les besoins des gestionnaires des réseaux électriques

Physical model investigation of the transition of a debris flow from the aerial to the water phase

In order to study the phenomena of debris flow motion and deposition at the transition between a channel and an underwater storage area, experiments were carried out on a physical model. The current situation and the planned works were reproduced in two idealised 1:100 scale models. The experiments show that the flows experience an abrupt transition into water with the creation of a water wave and enter the lake undergoing a decrease in front velocity, but without creating upstream stagnation or local deposits due to the sudden phase change. Instead, the debris flows move to the lower part of the model, where they are deposited in the horizontal plane and in the lower parts of the conoid. The construction of a retention basin in the lake does not decisively influence the dynamics of the transition between the aerial and underwater phases. The results of the physical modelling provide indispensable data for the validation of the 3D numerical codes currently being tested

[The quality of life as perceived by older people. Results of a phenomenological study]

Elderly Quality of life (QoL) is vulnerable because of the decline in physical and mental capacity, discharge from work, rupture of the family and isolation. Many QoL Scales are made for adults: there is little research investigating how older people perceive QOL

Embedded metal nanopatterns for near-field scattering-enhanced optical absorption

Simulations of metal nanopatterns embedded in a thin photovoltaic absorber show significantly enhanced absorbance within the semiconductor, with a more than 300% increase for {\lambda} = 800 nm. Integrating with AM1.5 solar irradiation, this yields a 70% increase in simulated short circuit current density in a 60 nm amorphous silicon film. Embedding such metal patterns inside an absorber maximally utilizes enhanced electric fields that result from intense, spatially organized, near-field scattering in the vicinity of the pattern. Appropriately configured (i.e. with a thin insulating coating), this optical metamedium architecture may be useful for increasing photovoltaic efficiency in thin film solar cells, including offering prospects for realistic ultrathin hot electron cells.Comment: Accepted for publication in Phys. Status Solidi A (2012). 17 pp, 3 fig

Could Public Restrooms Be an Environment for Bacterial Resistomes?

PMCID: PMC3547874This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

High-throughput discrimination of bacteria isolated from Astacus astacus and A. leptodactylus

Bacterial diseases and pathogens of crayfish are common, widespread, and occasionally causing serious mortalities. In order to take rapid measures for correct treatment of crayfish diseases, the turnover time and accuracy in bacterial identification is an issue. Bacteria isolated from tissues of apparently healthy Astacus astacus and A. leptodactylus were identified by the commercial phenotypic tests (API 20E) and by the matrix assisted laser induced desorption ionization connected to the time of flight mass spectrometry (MALDI-TOF MS). For Gram-negative rods, API 20E resulted in fewer species identifications than MALDI-TOF MS (5.2% versus 52.61%). The most frequently identified genus from A. astacus and A. leptodactylus was Pseudomonas spp.: API 20E (47.82%) and MALDI-TOF MS (52.17%). Both systems identified 60.86% of total isolates identically to the genus. Hafnia alvei was the only isolate for which API 20E and MALDI-TOF MS had a concordant reading to the species. MALDI-TOF MS proved to be a powerful, low-cost, rapid tool in bacterial genus identification. This is the first report of a direct comparison between the two systems for the identification of bacteria in crayfish, and also the first report on using MALDI-TOF MS for discrimination of freshwater crayfish bacterial isolates