Correlation and response in a driven dissipative model

We consider a simple dissipative system with spatial structure in contact with a heat bath. The system always exhibits correlations except in the cases of zero and maximal dissipation. We explicitly calculate the correlation function and the nonlocal response function of the system and show that they have the same spatial dependence. Finally, we examine heat transfer in the model, which agrees qualitatively with simulations of vibrated granular gases

First record of the invasive species Parasaissetia nigra in Greece

Στην παρούσα εργασία γίνεται η πρώτη καταγραφή του είδους Parasaissetia nigra (Nietner) (Hemiptera: Coccidae) επί της ροδιάς στην Ελλάδα. Η παρουσία του είδους αυτού διαπιστώθηκε σε καλλωπιστική ροδιά, τον Ιούνιο του 2014, εντός της Πανεπιστημιούπολης του Γεωπονικού Πανεπιστημίου Αθηνών. Δίδονται πληροφορίες σχετικά με τα μορφολογικά και βιολογικά χαρακτηριστικά, όπως και για την εξάπλωση του εντόμου.In June 2014, the nigra scale Parasaissetia nigra (Nietner) (Hemiptera: Coccidae) was recorded for the first time in Greece on pomegranate, Punica granatum. Its occurrence was observed in an ornamental pomegranate tree in the campus of the Agricultural University of Athens. Information on its morphology, biology and distribution is presented

Testing systems of identical components

We consider the problem of testing sequentially the components of a multi-component reliability system in order to figure out the state of the system via costly tests. In particular, systems with identical components are considered. The notion of lexicographically large binary decision trees is introduced and a heuristic algorithm based on that notion is proposed. The performance of the heuristic algorithm is demonstrated by computational results, for various classes of functions. In particular, in all 200 random cases where the underlying function is a threshold function, the proposed heuristic produces optimal solutions

Generalized inverse mean curvature flows in spacetime

Motivated by the conjectured Penrose inequality and by the work of Hawking, Geroch, Huisken and Ilmanen in the null and the Riemannian case, we examine necessary conditions on flows of two-surfaces in spacetime under which the Hawking quasilocal mass is monotone. We focus on a subclass of such flows which we call uniformly expanding, which can be considered for null as well as for spacelike directions. In the null case, local existence of the flow is guaranteed. In the spacelike case, the uniformly expanding condition leaves a 1-parameter freedom, but for the whole family, the embedding functions satisfy a forward-backward parabolic system for which local existence does not hold in general. Nevertheless, we have obtained a generalization of the weak (distributional) formulation of this class of flows, generalizing the corresponding step of Huisken and Ilmanen's proof of the Riemannian Penrose inequality.Comment: 21 pages, 1 figur

Evaluation of Methodologies for Microrna Biomarker Detection by Next Generation Sequencing

In recent years, microRNAs (miRNAs) in tissues and biofluids have emerged as a new class of promising biomarkers for numerous diseases. Blood-based biomarkers are particularly desirable since serum or plasma is easily accessible and can be sampled repeatedly. To comprehensively explore the biomarker potential of miRNAs, sensitive, accurate and cost-efficient miRNA profiling techniques are required. Next generation sequencing (NGS) is emerging as the preferred method for miRNA profiling; offering high sensitivity, single-nucleotide resolution and the possibility to profile a considerable number of samples in parallel. Despite the excitement about miRNA biomarkers, challenges associated with insufficient characterization of the sequencing library preparation efficacy, precision and method-related quantification bias have not been addressed in detail and are generally underappreciated in the wider research community. Here, we have tested in parallel four commercially available small RNA sequencing kits against a cohort of samples comprised of human plasma, human serum, murine brain tissue and a reference library containing ~ 950 synthetic miRNAs. We discuss the advantages and limits of these methodologies for massive parallel microRNAs profiling. This work can serve as guideline for choosing an adequate library preparation method, based on sensitivity, specificity and accuracy of miRNA quantification, workflow convenience and potential for automation

The Role of Friction in Compaction and Segregation of Granular Materials

We investigate the role of friction in compaction and segregation of granular materials by combining Edwards' thermodynamic hypothesis with a simple mechanical model and mean-field based geometrical calculations. Systems of single species with large friction coefficients are found to compact less. Binary mixtures of grains differing in frictional properties are found to segregate at high compactivities, in contrary to granular mixtures differing in size, which segregate at low compactivities. A phase diagram for segregation vs. friction coefficients of the two species is generated. Finally, the characteristics of segregation are related directly to the volume fraction without the explicit use of the yet unclear notion of compactivity.Comment: 9 pages, 6 figures, submitted to Phys. Rev.

Apparent wave function collapse caused by scattering

Some experimental implications of the recent progress on wave function collapse are calculated. Exact results are derived for the center-of-mass wave function collapse caused by random scatterings and applied to a range of specific examples. The results show that recently proposed experiments to measure the GRW effect are likely to fail, since the effect of naturally occurring scatterings is of the same form as the GRW effect but generally much stronger. The same goes for attempts to measure the collapse caused by quantum gravity as suggested by Hawking and others. The results also indicate that macroscopic systems tend to be found in states with (Delta-x)(Delta-p) = hbar/sqrt(2), but microscopic systems in highly tiltedly squeezed states with (Delta-x)(Delta-p) >> hbar.Comment: Final published version. 20 pages, Plain TeX, no figures. Online at http://astro.berkeley.edu/~max/collapse.html (faster from the US), from http://www.mpa-garching.mpg.de/~max/collapse.html (faster from Europe) or from [email protected]

Human plasma and serum extracellular small RNA reference profiles and their clinical utility

Circulating extracellular RNAs (exRNAs) have the potential to serve as biomarkers for a wide range of medical conditions. However, limitations in existing exRNA isolation methods and a lack of knowledge on parameters affecting exRNA variability in human samples may hinder their successful discovery and clinical implementation. Using combinations of denaturants, reducing agents, proteolysis, and revised organic extraction, we developed an automated, high-throughput approach for recovery of exRNAs and exDNA from the same biofluid sample. We applied this method to characterize exRNAs from 312 plasma and serum samples collected from 13 healthy volunteers at 12 time points over a 2-month period. Small RNA cDNA library sequencing identified nearly twofold increased epithelial-, muscle-, and neuroendocrine-cell–specific miRNAs in females, while fasting and hormonal cycle showed little effect. External standardization helped to detect quantitative differences in erythrocyte and platelet-specific miRNA contributions and in miRNA concentrations between biofluids. It also helped to identify a study participant with a unique exRNA phenotype featuring a miRNA signature of up to 20-fold elevated endocrine-cell–specific miRNAs and twofold elevated total miRNA concentrations stable for over 1 year. Collectively, these results demonstrate an efficient and quantitative method to discern exRNA phenotypes and suggest that plasma and serum RNA profiles are stable over months and can be routinely monitored in long-term clinical studies

Does the universe in fact contain almost no information?

At first sight, an accurate description of the state of the universe appears to require a mind-bogglingly large and perhaps even infinite amount of information, even if we restrict our attention to a small subsystem such as a rabbit. In this paper, it is suggested that most of this information is merely apparent, as seen from our subjective viewpoints, and that the algorithmic information content of the universe as a whole is close to zero. It is argued that if the Schr\"odinger equation is universally valid, then decoherence together with the standard chaotic behavior of certain non-linear systems will make the universe appear extremely complex to any self-aware subsets that happen to inhabit it now, even if it was in a quite simple state shortly after the big bang. For instance, gravitational instability would amplify the microscopic primordial density fluctuations that are required by the Heisenberg uncertainty principle into quite macroscopic inhomogeneities, forcing the current wavefunction of the universe to contain such Byzantine superpositions as our planet being in many macroscopically different places at once. Since decoherence bars us from experiencing more than one macroscopic reality, we would see seemingly complex constellations of stars etc, even if the initial wavefunction of the universe was perfectly homogeneous and isotropic.Comment: 17 pages, LATeX, no figures. Online with refs at http://astro.berkeley.edu/~max/nihilo.html (faster from the US), from http://www.mpa-garching.mpg.de/~max/nihilo.html (faster from Europe) or from [email protected]

How does flow in a pipe become turbulent?

The transition to turbulence in pipe flow does not follow the scenario familiar from Rayleigh-Benard or Taylor-Couette flow since the laminar profile is stable against infinitesimal perturbations for all Reynolds numbers. Moreover, even when the flow speed is high enough and the perturbation sufficiently strong such that turbulent flow is established, it can return to the laminar state without any indication of the imminent decay. In this parameter range, the lifetimes of perturbations show a sensitive dependence on initial conditions and an exponential distribution. The turbulence seems to be supported by three-dimensional travelling waves which appear transiently in the flow field. The boundary between laminar and turbulent dynamics is formed by the stable manifold of an invariant chaotic state. We will also discuss the relation between observations in short, periodically continued domains, and the dynamics in fully extended puffs.Comment: for the proceedings of statphys 2