Crystallographic properties and elemental migration in two-stage prepared CuIn1−xAlxSe2 thin films for photovoltaic applications

Two-stage fabrication of CuIn1−xAlxSe2 thin films for photovoltaic absorbers using sputtered Cu–In–Al metallic precursors has been investigated. Precursors containing different relative amounts of Al were selenised and their structural and chemical properties characterised. X-ray diffraction (XRD) analyses revealed that the Al was only incorporated into the chalcopyrite structure for precursor composition ratios x = [Al]/([Al] + [In]) ⩾ 0.38, while chemical analysis of the cross-section indicated partial segregation of Al near the back of the film. Precursor films in the range of compositions that yielded no Al incorporation were then selenised at four different temperatures. Glow discharge optical emission spectroscopy, plasma profiling time-of-flight mass spectrometry and XRD analyses provided an insight into the diffusion processes and reactions taking place during the selenisation stage. The effect of post-selenisation annealing without additional Se was also investigated, and led to partial incorporation of the Al into the CuInSe2 lattice but no rediffusion

Effect of the Operation of Kerr and Hungry Horse Dams on the Reproductive Success of Kokanee in the Flathead System, 1987 Final Report.

Studies of kokanee reproductive success in the Flathead system from 1981 to 1987 have assessed the losses in fish production attributable to hydroelectric operations. We estimated that the Flathead Lake shoreline spawning stock has lost at least 50,000 fish annually, since Kerr Dam was completed in 1938. The Flathead River spawning stock has lost 95,000 spawners annually because of the operations of Hungry Horse Dam. Lakeshore spawning has been adversely affected because Flathead Lake has been drafted to minimum pool during the winter when kokanee eggs are incubating in shallow shoreline redds. Egg mortality from exposure and desiccation of kokanee redds has increased since the mid 1970's. When the lake was drafted more quickly and held longer at minimum pool. Escapement surveys in the early 1950's, and a creel survey in the early 1960's have provided a baseline to which the present escapement levels can be compared, and loss estimated. Main stem Flathead River spawning has also declined since the mid 1970's when fluctuating discharge from Hungry Horse Dam during the spawning and incubation season exposed redds at the river margin and increased mortality. This decline followed an increase in main stem spawning in the late 1950's through the mid 1960's attributable to higher winter water temperature and relatively stable discharge from Hungry Horse Dam. Spawning escapement in the main stem exceeded 300,000 kokanee in the early 1970's as a result. Spawning in spring-influenced sites has comprised 35 percent of the main stem escapement from 1979 to 1986. We took that proportion of the early 1970's escapement (105,000) as the baseline against which to measure historic loss. Agricultural and suburban development has contributed less significantly to degradation of kokanee spawning habitat in the river system and on the Flathead Lake shoreline. Their influence on groundwater quality and substrate composition has limited reproductive success in few sites. Studies of the effects of hydroelectric operations on the reproductive success of kokanee in the Flathead system have been ongoing since 1980. Results of these studies have been published in a series of annual progress reports which are detailed in Appendix G. The reports summarize spawning site inventories and spawning escapement, egg and alevin mortality rates and the mechanisms by which water level fluctuations influence mortality, creel surveys, and investigation of the population dynamics of Flathead kokanee. The Region 1 offices of the Montana Department of Fish, Wildlife and Parks distribute this material to the scientific community and the general public. Until recently, it was considered feasible to recover losses to the Flathead kokanee fishery by enhancing and diversifying natural reproduction. But the establishment of opossum shrimp (M. relicta) in Flathead Lake has reduced the availability of zooplankton forage in the spring and summer, and may reduce the viability of juvenile kokanee. In 1986, research was redirected to quantify this competitive interaction and to investigate artificial means of enhancing the kokanee fishery. The average density of mysid shrimp in Flathead Lake has increased to 108/m{sup 2} in 1987, and at some locations density exceeds 500/m2. Mysid grazing pressure has delayed the pulse of zooplankton production in the spring and reduced zooplankton standing crop in the summer. Cladocerans such as Daphnia thorata, the preferred food of kokanee of all ages, are the most markedly affected species. The peak density of D. thorata in the summer has declined from 4.8/liter in 1983 to O.9/liter in 1987. Growth rates of underyearling and yearling kokanee have declined, apparently as a result of the reduction in their food supply. Spawning escapement has also declined, falling from 150,000 in 1985. to 25,000 in 1986, to 600 in 1987. Fry-to-adult survival has declined from 2.5 percent to near zero. The causes of high mortality, and which age-classes are most susceptible, are not completely understood, but the observed decline in juvenile growth rate implicates mysid-induced change in the trophic ecology of Flathead Lake. These biological changes in the Flathead system wi11 delay the formulation of a recovery plan for kokanee. Three scenarios represent the possible alternatives for such a plan. If mysid-induced changes in kokanee survival do not persist, or are limited in scope, we can proceed with enhancement of natural kokanee reproduction. This alternative includes protection of main stem spawning with stable fall and winter discharge from Hungry Horse Dam, and enhancing spawning in other tributaries. If the increase in wild fry mortality is limited, main stem flows can be tailored to optimize production from wild escapement and the kokanee fishery can be supplemented with hatchery-produced fry

Cardiac involvement in hereditary myopathy with early respiratory failure: A cohort study.

OBJECTIVE: To assess whether hereditary myopathy with early respiratory failure (HMERF) due to the c.951434T>C; (p.Cys31712Arg) TTN missense mutation also includes a cardiac phenotype. METHOD: Clinical cohort study of our HMERF cohort using ECG, 2D echocardiogram, and cross-sectional cardiac imaging with MRI or CT. RESULTS: We studied 22 participants with the c.951434T>C; (p.Cys31712Arg) TTN missense mutation. Three were deceased. Cardiac conduction abnormalities were identified in 7/22 (32%): sustained atrioventricular tachycardia (n = 2), atrial fibrillation (n = 2), nonsustained atrial tachycardia (n = 1), premature supraventricular complexes (n = 1), and unexplained sinus bradycardia (n = 1). In addition, 4/22 (18%) had imaging evidence of otherwise unexplained cardiomyopathy. These findings are supported by histopathologic correlation suggestive of myocardial cytoskeletal remodeling. CONCLUSIONS: Coexisting cardiac and skeletal muscle involvement is not uncommon in patients with HMERF arising due to the c.951434T>C; (p.Cys31712Arg) TTN mutation. All patients with pathogenic or putative pathogenic TTN mutations should be offered periodic cardiac surveillance.Wellcome Trust (101876/Z/13/Z, 096919Z/11/Z), Medical Research Council (UK) (G0601943), Medical Research Council Mitochondrial Biology Unit (MC_UP_1501/2).This is the final version of the article. It first appeared from Wolters Kluwer via http://dx.doi.org/10.1212/WNL.000000000000306

Measuring Markers of Liver Function Using a Micropatterned Paper Device Designed for Blood from a Fingerstick

This paper describes a paper-based microfluidic device that measures two enzymatic markers of liver function (alkaline phosphatase, ALP, and aspartate aminotransferase, AST) and total serum protein. A device consists of four components: (i) a top plastic sheet, (ii) a filter membrane, (iii) a patterned paper chip containing the reagents necessary for analysis, and (iv) a bottom plastic sheet. The device performs both the sample preparation (separating blood plasma from erythrocytes) and the assays; it also enables both qualitative and quantitative analysis of data. The data obtained from the paper-microfluidic devices show standard deviations in calibration runs and “spiked” standards that are acceptable for routine clinical use. This device illustrates a type of test useable for a range of assays in resource-poor settings.Chemistry and Chemical Biolog

A Paper-Based Multiplexed Transaminase Test for Low-Cost, Point-of-Care Liver Function Testing

In developed nations, monitoring for drug-induced liver injury through serial measurements of serum transaminases [aspartate aminotransferase (AST) and alanine aminotransferase (ALT)] in at-risk individuals is the standard of care. Despite the need, monitoring for drug-related hepatotoxicity in resource-limited settings is often limited by expense and logistics, even for patients at highest risk. This article describes the development and clinical testing of a paper-based, multiplexed microfluidic assay designed for rapid, semiquantitative measurement of AST and ALT in a fingerstick specimen. Using 223 clinical specimens obtained by venipuncture and 10 fingerstick specimens from healthy volunteers, we have shown that our assay can, in 15 min, provide visual measurements of AST and ALT in whole blood or serum, which allow the user to place those values into one of three readout “bins” [5× ULN, corresponding to tuberculosis/HIV treatment guidelines] with >90% accuracy. These data suggest that the ultimate point-of-care fingerstick device will have high impact on patient care in low-resource settings.Chemistry and Chemical Biolog

A Lagerstätte from Australia provides insight into the nature of Miocene mesic ecosystems

Reduced precipitation in the Miocene triggered the geographic contraction of rainforest ecosystems around the world. In Australia, this change was particularly pronounced; mesic rainforest ecosystems that once dominated the landscape transformed into the shrublands, grasslands, and deserts of today. A lack of well-preserved fossils has made it difficult to understand the nature of Australian ecosystems before the aridification. Here, we report on an exceptionally well-preserved rainforest biota from New South Wales, Australia. This Konservat-Lagerstätte hosts a rich diversity of microfossils, plants, insects, spiders, and vertebrate remains preserved in goethite. We document evidence for several species interactions including predation, parasitism, and pollination. The fossils are indicative of an oxbow lake in a mesic rainforest and suggest that rainforest distributions have shifted since the Miocene. The variety of fossils preserved, together with high fidelity of preservation, allows for unprecedented insights into the mesic ecosystems that dominated Australia during the Miocene

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase

Telomeres, the physical ends of eukaryotes chromosomes are transcribed into telomeric repeat containing RNA (TERRA), a large non-coding RNA of unknown function, which forms an integral part of telomeric heterochromatin. TERRA molecules resemble in sequence the telomeric DNA substrate as they contain 5′-UUAGGG-3′ repeats near their 3′-end which are complementary to the template sequence of telomerase RNA. Here we demonstrate that endogenous TERRA is bound to human telomerase in cell extracts. Using in vitro reconstituted telomerase and synthetic TERRA molecules we demonstrate that the 5′-UUAGGG-3′ repeats of TERRA base pair with the RNA template of the telomerase RNA moiety (TR). In addition TERRA contacts the telomerase reverse transcriptase (TERT) protein subunit independently of hTR. In vitro studies further demonstrate that TERRA is not used as a telomerase substrate. Instead, TERRA acts as a potent competitive inhibitor for telomeric DNA in addition to exerting an uncompetitive mode of inhibition. Our data identify TERRA as a telomerase ligand and natural direct inhibitor of human telomerase. Telomerase regulation by the telomere substrate may be mediated via its transcription

Quantification of calcium in infant formula using laser-induced breakdown spectroscopy (LIBS), Fourier transform mid-infrared (FT-IR) and Raman spectroscopy combined with chemometrics including data fusion

peer-reviewedLaser-induced breakdown spectroscopy (LIBS), Fourier transform mid-infrared (FT-IR) and Raman spectroscopy combined with chemometrics were investigated to quantify calcium (Ca) content in infant formula powder (INF). INF samples (n = 51) with calcium content levels (ca. 6.5–30 mg Ca/100 kJ) were prepared in accordance with the guidelines of Commission Directive 2006/125/EC. Atomic absorption spectroscopy (AAS) was used as the reference method for Ca content determination. To predict Ca content in INF samples, partial least squares regression (PLSR) models that developed based on LIBS, Raman and FT-IR spectral data, respectively. The model developed using LIBS data achieved the best performance for the quantification of Ca content in INF (R2 (cross-validation (CV))-0.99, RMSECV-0.29 mg/g; R2 (prediction (P))-1, RMSEP-0.63 mg/g). PLSR models that developed based on data fusion of Raman and FT-IR spectral features obtained the second best performance (R2CV-0.97, RMSECV-0.38 mg/g; R2P-0.97, RMSEP-0.36 mg/g). This study demonstrated the potential of LIBS, FT-IR and Raman spectroscopy to accurately quantify Ca content in INF.Department of Agriculture, Food and the Marine, Irelan

From the Bench to the Field in Low-Cost Diagnostics: Two Case Studies

Despite the growth of research in universities on point-of-care (POC) diagnostics for global health, most devices never leave the laboratory. The processes that move diagnostic technology from the laboratory to the field—the processes intended to evaluate operation and performance under realistic conditions—are more complicated than they might seem. Two case studies illustrate this process: the development of a paper-based device to measure liver function, and the development of a device to identify sickle cell disease based on aqueous multiphase systems (AMPS) and differences in the densities of normal and sickled cells. Details of developing these devices provide strategies for forming partnerships, prototyping devices, designing studies, and evaluating POC diagnostics. Technical and procedural lessons drawn from these experiences may be useful to those designing diagnostic tests for developing countries, and more generally, technologies for use in resource-limited environments.Chemistry and Chemical Biolog

ccdc80-l1 Is Involved in Axon Pathfinding of Zebrafish Motoneurons

Axon pathfinding is a subfield of neural development by which neurons send out axons to reach the correct targets. In particular, motoneurons extend their axons toward skeletal muscles, leading to spontaneous motor activity. In this study, we identified the zebrafish Ccdc80 and Ccdc80-like1 (Ccdc80-l1) proteins in silico on the basis of their high aminoacidic sequence identity with the human CCDC80 (Coiled-Coil Domain Containing 80). We focused on ccdc80-l1 gene that is expressed in nervous and non-nervous tissues, in particular in territories correlated with axonal migration, such as adaxial cells and muscle pioneers. Loss of ccdc80-l1 in zebrafish embryos induced motility issues, although somitogenesis and myogenesis were not impaired. Our results strongly suggest that ccdc80-l1 is involved in axon guidance of primary and secondary motoneurons populations, but not in their proper formation. ccdc80-l1 has a differential role as regards the development of ventral and dorsal motoneurons, and this is consistent with the asymmetric distribution of the transcript. The axonal migration defects observed in ccdc80-l1 loss-of-function embryos are similar to the phenotype of several mutants with altered Hedgehog activity. Indeed, we reported that ccdc80-l1 expression is positively regulated by the Hedgehog pathway in adaxial cells and muscle pioneers. These findings strongly indicate ccdc80-l1 as a down-stream effector of the Hedgehog pathway