The Human Serum Metabolome

Continuing improvements in analytical technology along with an increased interest in performing comprehensive, quantitative metabolic profiling, is leading to increased interest pressures within the metabolomics community to develop centralized metabolite reference resources for certain clinically important biofluids, such as cerebrospinal fluid, urine and blood. As part of an ongoing effort to systematically characterize the human metabolome through the Human Metabolome Project, we have undertaken the task of characterizing the human serum metabolome. In doing so, we have combined targeted and non-targeted NMR, GC-MS and LC-MS methods with computer-aided literature mining to identify and quantify a comprehensive, if not absolutely complete, set of metabolites commonly detected and quantified (with today's technology) in the human serum metabolome. Our use of multiple metabolomics platforms and technologies allowed us to substantially enhance the level of metabolome coverage while critically assessing the relative strengths and weaknesses of these platforms or technologies. Tables containing the complete set of 4229 confirmed and highly probable human serum compounds, their concentrations, related literature references and links to their known disease associations are freely available at http://www.serummetabolome.ca

Abstracts from the NIHR INVOLVE Conference 2017

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Effects of age of acquisition on brain activation during Chinese character recognition

The age of acquisition of a word (AoA) has a specific effect on brain activation during word identification in English and German. However, the neural locus of AoA effects differs across studies. According to Hernandez and Fiebach [Hernandez, A., & Fiebach, C. (2006). The brain bases of reading late-learned words: Evidence from functional MRI. Visual Cognition, 13(8), 1027¿1043], the effects of AoA on brain activation depend on the predictability of the connections between input (orthography) and output (phonology) in a lexical network. We tested this hypothesis by examining AoA effects in a non-alphabetic script with relatively arbitrary mappings between orthography and phonology¿Chinese. Our results showed that the effects of AoA in Chinese speakers are located in brain regions that are spatially distinctive including the bilateral middle temporal gyrus and the left inferior parietal cortex. An additional finding was that word frequency had an independent effect on brain activation in the right middle occipital gyrus only. We conclude that spatially distinctive effects of AoA on neural activity depend on the predictability of the mappings between orthography and phonology and reflect a division of labour towards greater lexical-semantic retrieval in non-alphabetic scripts