63 research outputs found
flatIGW - an inverse algorithm to compute the Density of States of lattice Self Avoiding Walks
We show that the Density of States (DoS) for lattice Self Avoiding Walks can
be estimated by using an inverse algorithm, called flatIGW, whose step-growth
rules are dynamically adjusted by requiring the energy histogram to be locally
flat. Here, the (attractive) energy associated with a configuration is taken to
be proportional to the number of non-bonded nearest neighbor pairs (contacts).
The energy histogram is able to explicitly direct the growth of a walk because
the step-growth rule of the Interacting Growth Walk \cite{IGW} samples the
available nearest neighbor sites according to the number of contacts they would
make. We have obtained the complex Fisher zeros corresponding to the DoS,
estimated for square lattice walks of various lengths, and located the
temperature by extrapolating the finite size values of the real zeros to their
asymptotic value, (reasonably close to the known value,
\cite{barkema}).Comment: 18 pages, 7 eps figures; parts of the manuscript are rewritten so as
to improve clarity of presentation; an extra reference adde
The Relationship Between Plasma Flow Doppler Velocities and Magnetic Field Parameters During the Emergence of Active Regions at the Solar Photospheric Level
A statistical study has been carried out of the relationship between plasma
flow Doppler velocities and magnetic field parameters during the emergence of
active regions at the solar photospheric level with data acquired by the
Michelson Doppler Imager (MDI) onboard the Solar and Heliospheric Observatory
(SOHO). We have investigated 224 emerging active regions with different spatial
scales and positions on the solar disc. The following relationships for the
first hours of the emergence of active regions have been analysed: i) of peak
negative Doppler velocities with the position of the emerging active regions on
the solar disc; ii) of peak plasma upflow and downflow Doppler velocities with
the magnetic flux growth rate and magnetic field strength for the active
regions emerging near the solar disc centre (the vertical component of plasma
flows); iii) of peak positive and negative Doppler velocities with the magnetic
flux growth rate and magnetic field strength for the active regions emerging
near the limb (the horizontal component of plasma flows); iv) of the magnetic
flux growth rate with the density of emerging magnetic flux; v) of the Doppler
velocities and magnetic field parameters for the first hours of the appearance
of active regions with the total unsigned magnetic flux at the maximum of their
development.Comment: 14 pages, 8 figures. The results of article were presented at the
ESPM-13 (12-16 September 2011, Rhodes, Greece, Abstract Book p. 102-103,
P.4.13,
http://astro.academyofathens.gr/espm13/documents/ESPM13_abstract_programme_book.pdf
The Horizontal Component of Photospheric Plasma Flows During the Emergence of Active Regions on the Sun
The dynamics of horizontal plasma flows during the first hours of the
emergence of active region magnetic flux in the solar photosphere have been
analyzed using SOHO/MDI data. Four active regions emerging near the solar limb
have been considered. It has been found that extended regions of Doppler
velocities with different signs are formed in the first hours of the magnetic
flux emergence in the horizontal velocity field. The flows observed are
directly connected with the emerging magnetic flux; they form at the beginning
of the emergence of active regions and are present for a few hours. The Doppler
velocities of flows observed increase gradually and reach their peak values
4-12 hours after the start of the magnetic flux emergence. The peak values of
the mean (inside the +/-500 m/s isolines) and maximum Doppler velocities are
800-970 m/s and 1410-1700 m/s, respectively. The Doppler velocities observed
substantially exceed the separation velocities of the photospheric magnetic
flux outer boundaries. The asymmetry was detected between velocity structures
of leading and following polarities. Doppler velocity structures located in a
region of leading magnetic polarity are more powerful and exist longer than
those in regions of following polarity. The Doppler velocity asymmetry between
the velocity structures of opposite sign reaches its peak values soon after the
emergence begins and then gradually drops within 7-12 hours. The peak values of
asymmetry for the mean and maximal Doppler velocities reach 240-460 m/s and
710-940 m/s, respectively. An interpretation of the observable flow of
photospheric plasma is given.Comment: 20 pages, 10 figures, 3 tables. The results of article were presented
at the ESPM-13 (12-16 September 2011, Rhodes, Greece, Abstract Book p. 102,
P.4.12,
http://astro.academyofathens.gr/espm13/documents/ESPM13_abstract_programme_book.pdf
The xylanolytic enzyme system of the thermophilic actinomycete Thermomonospora fusca
SIGLEAvailable from British Library Document Supply Centre- DSC:DX173562 / BLDSC - British Library Document Supply CentreGBUnited Kingdo
Trends in bowhead whales in West Greenland:aerial surveys vs. genetic capture-recapture analyses
We contrast two methods for estimating the trends of bowhead whales (Balaena mysticetus) in West Greenland: (1) double platform visual aerial survey, corrected for missed sightings and the time the whales are available at the surface; and (2) a genetic capture-recapture approach based on a 14-yr-long biopsy sampling program in Disko Bay. The aerial survey covered 39,000 km2 and resulted in 58 sightings, yielding an abundance estimate of 744 whales (CV = 0.34, 95% CI: 357–1,461). The genetic method relied on determining sex, mitochondrial haplotypes and genotypes of nine microsatellite markers. Based on samples from a total of 427 individuals, with 11 recaptures from previous years in 2013, this resulted in an estimate of 1,538 whales (CV = 0.24, 95% CI: 827–2,249). While the aerial survey is considered a snapshot of the local spring aggregation in Disko Bay, the genetic approach estimates the abundance of the source of this aggregation. As the whales in Disko Bay primarily are adult females that do not visit the bay annually, the genetic method would presumably yield higher estimates. The studies indicate that an increase in abundance observed between 1998 and 2006 has leveled off.</p
Composition of microbial communities in hexachlorocyclohexane (HCH) contaminated soils from Spain revealed with a habitat-specific microarray
Distribution and phylogeny of hexachlorocyclohexane-degrading bacteria in soils from Spain
Hexachlorocyclohexane (HCH)-degrading bacteria are believed to mediate natural attenuation of HCH contamination and have potential for active bioremediation processes. This study addressed the very limited understanding of the distribution, diversity and substrate specificity of such bacteria from 13 soil samples, varying in levels of HCH contamination, from four sites in Spain. Hexachlorocyclohexane removal occurred in 16 of 36 enrichment cultures. Hexachlorocyclohexane-degrading populations were clearly associated with HCH-contaminated soils, and populations growing on the δ-HCH isomer were only found in soil contaminated with δ-HCH. β-Hexachlorocyclohexane was persistent in enrichment cultures, and there was no evidence for populations growing on β-HCH. From α- and γ-HCH enrichment cultures, nine HCH-degrading isolates were obtained, which were all Sphingomonas spp. Attempts to isolate organisms from δ-HCH enrichment cultures failed. None of the isolates grew on HCH as a sole organic substrate in pure culture. All isolates degraded α- and γ-HCH, and most degraded β-HCH. δ-Hexachlorocyclohexane inhibited growth of most isolates, but could be degraded by cell suspensions of at least four strains. Denaturing gradient gel electrophoresis indicated that the isolates represented predominant populations in the enrichment cultures, but additional predominant populations, including some Pseudomonas spp., could not be isolated
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