Estimating stable isotope turnover rates of epidermal mucus and dorsal muscle for an omnivorous fish using a diet-switch experiment

© 2018, The Author(s). Stable isotope (SI) analysis studies rely on knowledge of isotopic turnover rates and trophic-step discrimination factors. Epidermal mucus (‘mucus’) potentially provides an alternative SI ‘tissue’ to dorsal muscle that can be collected non-invasively and non-destructively. Here, a diet-switch experiment using the omnivorous fish Cyprinus carpio and plant- and fish-based formulated feeds compared SI data between mucus and muscle, including their isotopic discrimination factors and turnover rates (as functions of time T and mass G, at isotopic half-life (50) and equilibrium (95)). Mucus isotope data differed significantly and predictively from muscle data. The fastest δ13C turnover rate was for mucus in fish on the plant-based diet (T50: 17 days, T95: 74 days; G50: 1.08(BM), G95: 1.40(BM)). Muscle turnover rates were longer for the same fish (T50: 44 days, T95: 190 days; G50: 1.13(BM), G95: 1.68(BM)). Longer half-lives resulted in both tissues from the fish-based diet. δ13C discrimination factors varied by diet and tissue (plant-based: 3.11–3.28‰; fishmeal: 1.28–2.13‰). Mucus SI data did not differ between live and frozen fish. These results suggest that mucus SI half-lives provide comparable data to muscle, and can be used as a non-destructive alternative tissue in fish-based SI studies

UCOL project: recent advances

UCOL (which stands for Ultra-wideband Coherent Optical LAN) is a system aiming to provide integrated support of narrowband and broadband services (data, voice and video) to the need of specific localized communication environments. This report presents the advances of UCOL after the first year of the realization phase. A number of modifications have been made since the original plan, allowing the project to be feasible applying current technology. The new approach to the physical layer is described together with the already developed optical subsystems; finally the UCOL access protocol is reported

Properties and crystallization of a genetically engineered, water-soluble derivative of penicillin-binding protein 5 of Escherichia coli K12

Derivatives of the Escherichia coli penicillin-binding protein 5 (PBP5) with truncated carboxyl terminals were obtained by altering the carboxyl-coding end of the dacA gene. After cloning the modified dacA gene into a runaway-replication-control plasmid, one clone that overproduced and excreted the desired protein into the periplasm was used as a source for the isolation of a water-soluble PBP5 (i.e. PBP5S). In PBP5S the carboxyl-terminal 21-amino-acid region of the wild-type protein was replaced by a short 9-amino-acid segment. Milligram amounts of PBP5S were purified by penicillin affinity chromatography in the absence of detergents or of chaotropic agents. PBP5S was stable and possessed DD-carboxypeptidase activity without added Triton X-100. Upon reaction with [14C]benzylpenicillin it was converted into a rather short-lived acyl-enzyme complex, as observed with PBP5. Both PBP5 and PBP5S were crystallized. In contrast to PBP5, PBP5S yielded enzymatically active, well-formed prismatic crystals suitable for X-ray analysis

Diffusive methane emissions to the atmosphere from Lake Kivu (Eastern Africa)

We report a data-set of methane (CH4) concentrations in the surface waters of Lake Kivu obtained during four cruises (March 2007, September 2007, June 2008, April 2009) covering the two main seasons, rainy (October to May) and dry (June to September). Spatial gradients of CH4 concentrations were modest in the surface waters of the main basin. In Kabuno Bay (a small sub-basin), CH4 concentrations in surface waters were significantly higher than in the main basin. Seasonal variations of CH4 in the main basin were strongly driven by deepening of the mixolimnion and mixing of surface waters with deeper waters rich in CH4. On an annual basis, both Kabuno Bay and the main basin of Lake Kivu were over-saturated in CH4 with respect to atmospheric equilibrium (7330% and 2510%, respectively), and emitted CH4 to the atmosphere (39 mmol m-2 yr-1 and 13 mmol m-2 yr-1, respectively). The source of CH4 to atmosphere was two orders of magnitude lower than the CH4 upward flux. The source of CH4 to the atmosphere from Lake Kivu corresponded to ~60% of the terrestrial sink of atmospheric CH4 over the lake’s catchment. A global cross-system comparison of CH4 in surface waters of lakes shows that both Kabuno Bay and the main basin are at the lower end of values in lakes globally, despite the huge amounts of CH4 in the deeper layers of the lake. This is related to the strongly meromictic nature of the lake that promotes an intense removal of CH4 by bacterial oxidation.AFRIVA