373 research outputs found
Exploring new frontiers in modeling complex zeolite-catalyzed reactions using advanced molecular dynamics techniques
We show the potential of advanced molecular dynamics techniques to obtain insight into the complex MTO process by thoroughly studying proton mobility and mapping free energy surfaces of reaction steps at high temperature. The applied methodology can be used to unravel any complex zeolitic process at the nanometer scale level
On the origin of the extremely different solubilities of polyethers in water
The solubilities of polyethers are surprisingly counter-intuitive. The best-known example is the difference between polyethylene glycol ([–CH2–CH2–O–]n) which is infinitely soluble, and polyoxymethylene ([–CH2–O–]n) which is completely insoluble in water, exactly the opposite of what one expects from the C/O ratios of these molecules. Similar anomalies exist for oligomeric and cyclic polyethers. To solve this apparent mystery, we use femtosecond vibrational and GHz dielectric spectroscopy with complementary ab initio calculations and molecular dynamics simulations. We find that the dynamics of water molecules solvating polyethers is fundamentally different depending on their C/O composition. The ab initio calculations and simulations show that this is not because of steric effects (as is commonly believed), but because the partial charge on the O atoms depends on the number of C atoms by which they are separated. Our results thus show that inductive effects can have a major impact on aqueous solubilities
Nonequilibrium candidate Monte Carlo: A new tool for efficient equilibrium simulation
Metropolis Monte Carlo simulation is a powerful tool for studying the
equilibrium properties of matter. In complex condensed-phase systems, however,
it is difficult to design Monte Carlo moves with high acceptance probabilities
that also rapidly sample uncorrelated configurations. Here, we introduce a new
class of moves based on nonequilibrium dynamics: candidate configurations are
generated through a finite-time process in which a system is actively driven
out of equilibrium, and accepted with criteria that preserve the equilibrium
distribution. The acceptance rule is similar to the Metropolis acceptance
probability, but related to the nonequilibrium work rather than the
instantaneous energy difference. Our method is applicable to sampling from both
a single thermodynamic state or a mixture of thermodynamic states, and allows
both coordinates and thermodynamic parameters to be driven in nonequilibrium
proposals. While generating finite-time switching trajectories incurs an
additional cost, driving some degrees of freedom while allowing others to
evolve naturally can lead to large enhancements in acceptance probabilities,
greatly reducing structural correlation times. Using nonequilibrium driven
processes vastly expands the repertoire of useful Monte Carlo proposals in
simulations of dense solvated systems
Optimizing the Energetics of FLP-Type H<sub>2</sub> Activation by Modulating the Electronic and Structural Properties of the Lewis Acids: A DFT Study
Linear Scaling Relationships to Predict p <i>K</i><sub>a</sub>'s and Reduction Potentials for Bioinspired Hydrogenase Catalysis
Linear Scaling Relationships to Predict p <i>K</i><sub>a</sub>'s and Reduction Potentials for Bioinspired Hydrogenase Catalysis
[Image: see text] Biomimetic catalysts inspired by the active site of the [FeFe] hydrogenase enzyme can convert protons into molecular hydrogen. Minimizing the overpotential of the electrocatalytic process remains a major challenge for practical application of the catalyst. The catalytic cycle of the hydrogen production follows an ECEC mechanism (E represents an electron transfer step, and C refers to a chemical step), in which the electron and proton transfer steps can be either sequential or coupled (PCET). In this study, we have calculated the pK(a)’s and the reduction potentials for a series of commonly used ligands (80 different complexes) using density functional theory. We establish that the required acid strength for protonation at the Fe–Fe site correlates with the standard reduction potential of the di-iron complexes with a linear energy relationship. These linear relationships allow for fast screening of ligands and tuning of the properties of the catalyst. Our study also suggests that bridgehead ligand properties, such as bulkiness and aromaticity, can be exploited to alter or even break the linear scaling relationships
Puzzle of the Intramolecular Hydrogen Bond of Dibenzoylmethane Resolved by Molecular Dynamics Simulations
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