Automated quantitative drug susceptibility testing of non-tuberculous mycobacteria using MGIT 960/EpiCenter TB eXiST

Objectives To assess the predictive value of in vitro drug susceptibility testing (DST) in slow-growing non-tuberculous mycobacteria (NTM), knowledge on quantitative levels of drug susceptibility should be available. The aim of this study was to investigate the suitability of the MGIT 960/TB eXiST system for quantitative DST of NTM. Methods We have assessed quantitative levels of drug susceptibility for clinical isolates of Mycobacterium avium, Mycobacterium intracellulare and Mycobacterium kansasii by comparing radiometric Bactec 460TB-based DST with non-radiometric DST using MGIT 960/TB eXiST. Results MGIT 960/TB eXiST gives results comparable to those of Bactec 460TB. Conclusions The MGIT 960/TB eXiST appears suitable for quantitative DST of NT

Raman spectra of olivine measured in different planetary environments

Missions to bodies of our solar system are coming up and imply new instrumentation to be applied remotely and in situ. In ESA’s ExoMars mission the Raman Laser Spectrometer (RLS) will identify minerals and organic compounds in Martian surface rocks and soils. Here we present the results of a Raman study of different olivines with variable Fo and Fa contents. We chose olivine because it is a rock forming mineral and is found as an abundant mineral in Martian meteorites. We determined the Raman spectra in different environmental conditions that include vacuum, 8 mbar CO2 atmosphere and temperatures between room temperature and 10 K. These environmental conditions resemble those on asteroids as well as on Mars and Moon. Thus our study investigates the influence of these varying conditions on the position and band width of the Raman lines, which is to be known when such investigations are performed in future space missions

Limits of life and the habitability of Mars: The ESA space experiment BIOMEX on the ISS

BIOMEX (BIOlogy and Mars EXperiment) is an ESA/Roscosmos space exposure experiment housed within the exposure facility EXPOSE-R2 outside the Zvezda module on the International Space Station (ISS). The design of the multiuser facility supports—among others—the BIOMEX investigations into the stability and level of degradation of space-exposed biosignatures such as pigments, secondary metabolites, and cell surfaces in contact with a terrestrial and Mars analog mineral environment. In parallel, analysis on the viability of the investigated organisms has provided relevant data for evaluation of the habitability of Mars, for the limits of life, and for the likelihood of an interplanetary transfer of life (theory of lithopanspermia). In this project, lichens, archaea, bacteria, cyanobacteria, snow/permafrost algae, meristematic black fungi, and bryophytes from alpine and polar habitats were embedded, grown, and cultured on a mixture of martian and lunar regolith analogs or other terrestrial minerals. The organisms and regolith analogs and terrestrial mineral mixtures were then exposed to space and to simulated Mars-like conditions by way of the EXPOSE-R2 facility. In this special issue, we present the first set of data obtained in reference to our investigation into the habitability of Mars and limits of life. This project was initiated and implemented by the BIOMEX group, an international and interdisciplinary consortium of 30 institutes in 12 countries on 3 continents. Preflight tests for sample selection, results from ground-based simulation experiments, and the space experiments themselves are presented and include a complete overview of the scientific processes required for this space experiment and postflight analysis. The presented BIOMEX concept could be scaled up to future exposure experiments on the Moon and will serve as a pretest in low Earth orbit

Effects of simulated micrometeorite bombardment of rock-forming silicates in Raman spectra

In this laboratorial study, we investigate the influence of micrometeorite bombardment on bodies without atmosphere (such as Phobos) as one activator of space weathering on different silicates and their mixtures on Raman spectr

Effect of LIBS-Induced Alteration on Subsequent Raman Analysis of Iron Sulfides

Mineral alteration is a possible side effect of spectroscopic techniques involving laser ablation, such as laser-induced breakdown spectroscopy (LIBS), and is related to the interaction of the generated plasma and ablated material with samples, dust, or ambient atmosphere. Therefore, it is essential to understand these interactions for analytical techniques involving laser ablation, especially for space research. In this combined LIBS–Raman analytical study, pyrite (FeS_2) and pyrrhotite (Fe_{1–x}S) samples have been consecutively measured with LIBS and Raman spectroscopy, under three different atmospheric conditions: ∼10^{–4} mbar (atmosphereless body), ∼7 mbar, and Martian atmospheric composition (Martian surface conditions), and 1 bar and Martian atmospheric composition. Furthermore, a dust layer was simulated using ZnO powder in a separate test and applied to pyrite under Martian atmospheric conditions. In all cases, Raman spectra were obscured after the use of LIBS in the area of and around the formed crater. Additional Raman transitions were detected, associated with sulfur (pyrite, 7.0 mbar and 1.0 bar), polysulfides (all conditions), and magnetite (both minerals, 1.0 bar). Magnetite and polysulfides formed a thin film of up to 350–420 and 70–400 nm in the outer part of the LIBS crater, respectively. The ZnO-dust test led to the removal of the dust layer, with a similar alteration to the nondust pyrite test at 7.0 mbar. The tests indicate that recombination with the CO_2-rich atmosphere is significant at least for pressures from 1.0 bar and that plasma–dust interaction is insignificant. The formation of sulfur and polysulfides indicates fractionation and possible loss of volatile elements caused by the heat of the LIBS laser. This should be taken into account when interpreting combined LIBS–Raman analyses of minerals containing volatile elements on planetary surfaces

Raman spectra of the Markovka chondrite (H4)

Raman spectroscopy and scanning electron microscopy methods were used to study the fragment of the Markovka (H4 chondrite) meteorite. A characteristic set of silicate minerals (olivine and pyroxene), oxides and hydroxides (maghemite and goethite), troilite, and carbonates (aragonite) was determined. The structural features revealed by Raman spectroscopy allow us to draw important conclusions on thermal history of the parent body including both the temperature experienced by the rock on the parent body and their cooling rate as well as the constraints on the size of the parent body and the Mg composition of the assumed fluid

Raman spectroscopic analysis of the calcium oxalate producing extremotolerant lichen Circinaria gyrosa

Dieser Beitrag ist mit Zustimmung des Rechteinhabers aufgrund einer (DFG geförderten) Allianz- bzw. Nationallizenz frei zugänglich.This publication is with permission of the rights owner freely accessible due to an Alliance licence and a national licence (funded by the DFG, German Research Foundation) respectively.In the context of astrobiological exposure and simulation experiments in the BIOMEX project, the lichen Circinaria gyrosa was investigated by Raman microspectroscopy. Owing to the symbiotic nature of lichens and their remarkable extremotolerance, C. gyrosa represents a valid model organism in recent and current astrobiological research. Biogenic compounds of C. gyrosa were studied that may serve as biomarkers in Raman assisted remote sensing missions, e.g. ExoMars. The surface as well as different internal layers of C. gyrosa have been characterized and data on the detectability and distribution of β-carotene, chitin and calcium oxalate monohydrate (whewellite) are presented in this study. Raman microspectroscopy was applied on natural samples and thin sections. Although calcium oxalates can also be formed by rare geological processes it may serve as a suitable biomarker for astrobiological investigations. In the model organism C. gyrosa, it forms extracellular crystalline deposits embedded in the intra-medullary space and its function is assumed to balance water uptake and gas exchange during the rare, moist to wet environmental periods that are physiologically favourable. This is a factor that was repeatedly demonstrated to be essential for extremotolerant lichens and other organisms. Depending on the decomposition processes of whewellite under extraterrestrial environmental conditions, it may not only serve as a biomarker of recent life, but also of past and fossilized organisms.BMWi, 50WB1153, Analysen zur Stabilität und Degradation biogener Substanzen sowie zum Resistenzpotential der Fleche Buellia frigida unter simulierten Marsbedingungen und nach Exposition im LEO-Weltrau