Substrate quality of drained organic soils—Implications for carbon dioxide fluxes

Background: Peatlands only cover a minor fraction of the global terrestrial surface, but due to drainage, they are major contributors to carbon dioxide (CO2) emissions from soils. Previous studies have shown that hydrological conditions, nutrient availability and anthropogenic disturbance play an important role in the mineralisation of organic matter. Furthermore, microbial turnover depends on peat quality, which is determined by its botanical origin and degree of transformation under natural conditions. Aims: The objective of this study was to shed light on the interdependence between mineralisation rates, secondary transformation of peat and chemical composition by examining the differences between bog and fen peat and between strongly degraded topsoil and well-preserved subsoil. Methods: Bog and fen peat from ten different peatlands under grassland use in Germany were analysed for their chemical composition using standard 13C nuclear magnetic resonance (NMR) spectroscopy and wet chemical extractions for fibre analysis. The radiocarbon age was determined as well. The results were combined with CO2 fluxes from a previous incubation study. Results: Topsoils had higher shares of proteins and lipids, and lower shares of carbohydrates and aromatics than subsoils. Bog peat subsoils were characterised by higher shares of carbohydrates and lower shares of aromatics than fen peat subsoils. Topsoils were more similar to each other in their chemical composition than the subsoils. Considering all samples, aromatics and phenolics were negatively correlated with CO2 fluxes. Measured CO2 fluxes from topsoils were significantly higher than from subsoils. However, no influences of chemical composition on CO2 fluxes were detected when examining topsoils and subsoils separately. Even though aromatics and phenolics showed positive relationships with radiocarbon age, differences in age alone were unable to explain the higher amounts of these compounds in the subsoil. Conclusions: The results imply that chemical composition of topsoil peat is not the reason for higher mineralisation rates compared to subsoil peat, but rather a consequence of decomposition and transformation. Thus, peat mineralisation of drained organic soils under agriculture might not slow down over time due to gradually decreasing peat quality but could increase further

The BKG/IGGB VLBI Analysis Center

In 2012, the activities of the BKG/IGGB VLBI Analysis Center, as in previous years, consisted of routine computations of Earth orientation parameter (EOP) time series and of a number of research topics in geodetic VLBI. The VLBI group at BKG continued its regular submissions of time series of tropospheric parameters and the generation of daily SINEX (Solution INdependent EXchange format) files. Quarterly updated solutions have been computed to produce terrestrial reference frame (TRF) and celestial reference frame (CRF) realizations. Routine computations of the UT1-UTC Intensive observations include all sessions of the Kokee-Wettzell and Tsukuba-Wettzell baselines and the networks Kokee-Svetloe-Wettzell and Ny-degAlesund-Tsukuba-Wettzell. The VLBI group at BKG developed a procedure to get the most probable station positions of Tsukuba after the earthquake on March 11, 2011 for the epochs of the Intensive sessions. The analysis of the Intensive sessions with station Tsukuba could be resumed in February 2012. At IGGB, the emphasis has been placed on individual research topics

Erk2 but not Erk1 regulates crosstalk between Met and EGFR in squamous cell carcinoma cell lines

Background: Squamous cell carcinoma (SCC) is the most common type of tongue and larynx cancer and a common type of lung cancer. In this study, we attempted to specifically evaluate the signaling pathway underlying HGF/Met induced EGFR ligand release in SSCs. The Met proto-oncogene encodes for a tyrosine kinase receptor which is often hyperactivated in human cancers. Met activation correlates with poor patient outcome. Several studies revealed a role of Met in receptor-crosstalk inducing either activation of other receptors, or inducing their resistance to targeted cancer treatments. In an epithelial tumor cell line screen we recently showed that the Met ligand HGF blocks the EGFR tyrosine kinase and at the same time activates transcriptional upregulation and accumulation in the supernatant of the EGFR ligand amphiregulin (Oncogene 32: 3846-56, 2013). In the present work we describe the pathway responsible for the amphiregulin induction. Findings: Amphiregulin is transcriptionally upregulated and is released into the supernatant. We show that Erk2 but not Erk1 mediates amphiregulin upregulation upon treatment with monocyte derived HGF. A siRNA knockdown of Erk2 completely abolishes amphiregulin release in squamous cell carcinomas. Conclusions: These results identify Erk2 as the key downstream signal transducer between Met activation and EGFR ligand upregulation in squamous cell carcinoma cell lines derived from tongue, larynx and lung

Regulation of Akt(ser473) phosphorylation by Choline kinase in breast carcinoma cells

<p>Abstract</p> <p>Background</p> <p>The serine/threonine kinase PKB/Akt plays essential role in various cellular processes including cell growth and proliferation, metabolism and cell survival. The importance of the Akt pathway is highlighted by the mutation of various components of the pathway such as the PTEN and PI3-kinase (P110α) in human cancers. In this paper, we employed an RNA interference library targeting all human kinases to screen for kinases involved in the regulation of Akt activation, in particular serine 473 phosphorylation. Here, we transfected the MDA-MB 468 breast cell line with the human kinome siRNA library and measured Akt activation using an antibody specific for phosphoserine 473 of Akt.</p> <p>Results</p> <p>The screen revealed that phosphorylation of Akt(ser473) can be regulated by more than 90 kinases. Interestingly, phosphorylation of Akt(ser473), but not thr308, can be severely reduced by inhibition of Choline kinase activity <it>via </it>siRNA or small molecule inhibitors. We show here that the regulation of Akt phosphorylation by Choline kinase is PI3K-independent. In addition, xenograft tumors treated with Choline kinase inhibitors demonstrated a statistically significant decrease in Akt(ser473) phosphorylation. Importantly, the reduction in phosphorylation correlates with regression of these xenograft tumors in the mouse model.</p> <p>Conclusion</p> <p>High Choline kinase expression and activity has previously been implicated in tumor development and metastasis. The mechanism by which Choline kinase is involved in tumor formation is still not fully resolved. From our data, we proposed that Choline kinase plays a key role in regulating Akt(ser473) phosphorylation, thereby promoting cell survival and proliferation.</p

PTK7 as a potential prognostic and predictive marker of response to adjuvant chemotherapy in breast cancer patients, and resistance to anthracycline drugs

Biomarkers predicting resistance to particular chemotherapy regimens could play a key role in optimally individualized treatment concepts. PTK7 (protein tyrosine kinase 7) belongs to the receptor tyrosine kinase family involved in several physiological, but also malignant, cell behaviors. Recent studies in acute myeloid leukemia have associated PTK7 expression with resistance to anthracycline therapy. PTK7 mRNA expression in primary tumor tissue (PTT) and corresponding lymph node tissue (LNT) were retrospectively measured in 117 patients with early breast cancer;PTK7 expression was available in 103 PTT and 108 LNT samples. Median age was 60 years (range, 27-87 years). At a median follow-up of 28.5 months, 6 deaths and 16 recurrences had occurred. PTK7 expression correlations with clinicopathological features were computed and PTK7 expression effects on patient outcome were analyzed in three cohorts defined by adjuvant treatment: anthracycline-based treatment, other chemotherapy regimens (including taxane or other substances),or no chemotherapy. Association of PTK7 expression with clinicopathological features was seen only for age in PTT and nodal stage in LNT. High LN PTK7 was associated with poorer disease-free survival (DFS) in the total population (3-year DFS: low [81.7%] versus high [70.4%];P=0.016) and in patients without adjuvant chemotherapy (3-year DFS: low [91.7%] versus high [22.3%];P<0.001),but not in patients receiving adjuvant chemotherapy (P=0.552). DFS stratified by PTK7 expression was compared in treatment cohorts: In patients with low LN PTK7 expression, neither chemotherapy cohort showed significantly better survival than the no-chemotherapy cohort. In patients with high LN PTK7 expression, those receiving chemotherapy, including substances other than anthracyclines, but not those receiving only anthracycline-based chemotherapy, showed significantly better DFS than those receiving no chemotherapy (P=0.001). Our results support earlier findings that PTK7 may be a prognostic and predictive marker associated with resistance to anthracycline-based chemotherapy. Further investigations are needed to validate these findings in breast cancer

Adding a piece to the puzzle of Latin American blood donors and the potential risk of Trypanosoma cruzi transmission in Germany

Introduction: Chagas disease (CD) is caused by the Trypanosoma cruzi (T. cruzi) infection and has become a global health concern due to population mobility, as well as non-vectorial transmission routes. Several countries outside Latin America (LA) have reported transfusion-associated transmission, but equivalent studies in Germany are lacking. This study aims to collect first data on the risk of transfusion associated transmission as well as LA blood donors originating from CD endemic countries in Germany Materials and methods: A total of 305 blood donors who were assumed to be at risk for T. cruzi infection were retrospectively (267) as well as prospectively (38) selected at German blood donation sites in Bavaria and Berlin, and all retrospectively as well as 27 prospectively selected were serologically screened. Prospective study subjects additionally filled out a questionnaire. Results: All samples tested seronegative for T. cuzi specific antibodies. Prospectively enrolled study subjects all had high socio-economic status including good education. Knowledge regarding CD was limited but willingness to donate frequently was high. Blood donation rates from donors born in LA countries seem to increase from 2015. Discussion: Although no transfusion associated T. cruzi infection has been documented in Germany, it has likely already happened unnoticed, or will do in the near future. Performing risk-adapted serology-based blood donor screenings in Germany could avoid transfusion-associated transmission events as well as contribute to active case detection. Moreover, larger, and ongoing studies are needed to increase the evidence base as well as end the neglect of CD in Germany