Molecular Structures of Quiescently Grown and Brain-Derived Polymorphic Fibrils of the Alzheimer Amyloid Aβ9-40 Peptide: A Comparison to Agitated Fibrils

The presence of amyloid deposits consisting primarily of Amyloid-β (Aβ) fibril in the brain is a hallmark of Alzheimer's disease (AD). The morphologies of these fibrils are exquisitely sensitive to environmental conditions. Using molecular dynamics simulations combined with data from previously published solid-state NMR experiments, we propose the first atomically detailed structures of two asymmetric polymorphs of the Aβ9-40 peptide fibril. The first corresponds to synthetic fibrils grown under quiescent conditions and the second to fibrils derived from AD patients' brain-extracts. Our core structure in both fibril structures consists of a layered structure in which three cross-β subunits are arranged in six tightly stacked β-sheet layers with an antiparallel hydrophobic-hydrophobic and an antiparallel polar-polar interface. The synthetic and brain-derived structures differ primarily in the side-chain orientation of one β-strand. The presence of a large and continually exposed hydrophobic surface (buried in the symmetric agitated Aβ fibrils) may account for the higher toxicity of the asymmetric fibrils. Our model explains the effects of external perturbations on the fibril lateral architecture as well as the fibrillogenesis inhibiting action of amphiphilic molecules

[PSI+] Maintenance Is Dependent on the Composition, Not Primary Sequence, of the Oligopeptide Repeat Domain

[PSI+], the prion form of the yeast Sup35 protein, results from the structural conversion of Sup35 from a soluble form into an infectious amyloid form. The infectivity of prions is thought to result from chaperone-dependent fiber cleavage that breaks large prion fibers into smaller, inheritable propagons. Like the mammalian prion protein PrP, Sup35 contains an oligopeptide repeat domain. Deletion analysis indicates that the oligopeptide repeat domain is critical for [PSI+] propagation, while a distinct region of the prion domain is responsible for prion nucleation. The PrP oligopeptide repeat domain can substitute for the Sup35 oligopeptide repeat domain in supporting [PSI+] propagation, suggesting a common role for repeats in supporting prion maintenance. However, randomizing the order of the amino acids in the Sup35 prion domain does not block prion formation or propagation, suggesting that amino acid composition is the primary determinant of Sup35's prion propensity. Thus, it is unclear what role the oligopeptide repeats play in [PSI+] propagation: the repeats could simply act as a non-specific spacer separating the prion nucleation domain from the rest of the protein; the repeats could contain specific compositional elements that promote prion propagation; or the repeats, while not essential for prion propagation, might explain some unique features of [PSI+]. Here, we test these three hypotheses and show that the ability of the Sup35 and PrP repeats to support [PSI+] propagation stems from their amino acid composition, not their primary sequences. Furthermore, we demonstrate that compositional requirements for the repeat domain are distinct from those of the nucleation domain, indicating that prion nucleation and propagation are driven by distinct compositional features

A new era for understanding amyloid structures and disease

The aggregation of proteins into amyloid fibrils and their deposition into plaques and intracellular inclusions is the hallmark of amyloid disease. The accumulation and deposition of amyloid fibrils, collectively known as amyloidosis, is associated with many pathological conditions that can be associated with ageing, such as Alzheimer disease, Parkinson disease, type II diabetes and dialysis-related amyloidosis. However, elucidation of the atomic structure of amyloid fibrils formed from their intact protein precursors and how fibril formation relates to disease has remained elusive. Recent advances in structural biology techniques, including cryo-electron microscopy and solid-state NMR spectroscopy, have finally broken this impasse. The first near-atomic-resolution structures of amyloid fibrils formed in vitro, seeded from plaque material and analysed directly ex vivo are now available. The results reveal cross-β structures that are far more intricate than anticipated. Here, we describe these structures, highlighting their similarities and differences, and the basis for their toxicity. We discuss how amyloid structure may affect the ability of fibrils to spread to different sites in the cell and between organisms in a prion-like manner, along with their roles in disease. These molecular insights will aid in understanding the development and spread of amyloid diseases and are inspiring new strategies for therapeutic intervention

Novel Alkylborate-Dithiocarbamate lubricant additives: synthesis and tribophysical characterization

Boron-based lubricant additives have recently received significant attention, because of their wear-reducing and frictional properties and low pollution. At the same time, dithiocarbamate complexes with different metals have a long history of being used as multifunctional additives to lubricants. In this study, novel, environmentally friendly additives containing alkylborate and dithiocarbamate groups with alkyl or methylbenzyl substitutes in one molecule were studied. Tribological tests were performed with the additives admixed in a mineral oil using steel-on-steel contacts in a four-ball tribometer. Borate derivatives of different dithiocarbamate ligands were synthesized by several step reactions to investigate tribochemical properties of boron, sulfur, and nitrogen combined in one selected compound. Viscous liquid products were characterized by multinuclear (1)H, (13)C, and (11)B NMR spectroscopy. The surface morphology and the elemental composition of the tribofilms were investigated using an optical profiler and scanning electron microscopy/energy dispersive X-ray spectroscopy (SEM/EDS). It was found that some of these novel compounds provide better antiwear performance and similar frictional properties compared with a commercially available ZnDTP package. Traces of sulfur in the tribofilms formed with both 0.2 and 1.0 wt% of alkylborate-dithiocarbamate compounds in a mineral oil were detected with EDS

Boron in tribology: from Borates to ionic liquids

Boron compounds are widely used in a range of tribological applications such as friction modifiers, antioxidants, antiwear additives, and in many cases as environmentally friendly lubricants. The chemical nature and structure of boron compounds provide multifunctionality. They are used as (1) solid lubricants such as boric acid and hexagonal boron nitride, (2) liquid lubricants such as ionic liquids, (3) lubricant additives such as borate derivatives of various organic and inorganic compounds, and (4) coatings such as cubic boron nitride and different metal borides. Boron is also one of the most favorable elements for coatings and thin films in biotribological and biomedical applications. This review outlines the growing role of boron in lubrication over the past several decades, summarizes the main findings, and identifies future challenges related to boron chemistry