10 research outputs found
2,2′-Bipyridin-1-ium hemioxalate oxalic acid monohydrate
The asymmetric unit of the title compound, C10H9N2+·0.5C2O42−·C2H2O4·H2O, consists of a 2,2′-bipyridinium cation, half an oxalate dianion, one oxalic acid and one water molecule. One N atom in 2,2′-bipyridine is unprotonated, while the second is protonated and forms an N—H...O hydrogen bond. In the crystal, the anions are connected with surrounding acid molecules and water molecules by strong near-linear O—H...O hydrogen bonds. The water molecules are located between the anions and oxalic acids; their O atoms participate as donors and acceptors, respectively, in O—H...O hydrogen bonds, which form sheets arranged parallel to the ac plane
Influence of the Solvent on the Stability of Aminopurine Tautomers and Properties of the Amino Group
Amino derivatives of purine (2-, 6-, 8-, and N-NH2) have found many applications in biochemistry. This paper presents the results of a systematic computational study of the substituent and solvent effects in these systems. The issues considered are the electron-donating properties of NH2, its geometry, π-electron delocalization in purine rings and tautomeric stability. Calculations were performed in ten environments, with 1 2 proximity interactions depend on its position and the tautomer. The results show that they are the main factor determining how solvation affects the electron-donating strength and geometry of NH2. Proximity with the NH∙∙∙HN repulsive interaction between the NH2 and endocyclic NH group results in stronger solvent effects than the proximity with two attractive NH∙∙∙N interactions. The effect of amino and nitro (previously studied) substitution on aromaticity was compared; these two groups have, in most cases, the opposite effect, with the largest being in N1H and N3H purine tautomers. The amino group has a smaller effect on the tautomeric preferences of purine than the nitro group. Only in 8-aminopurine do tautomeric preferences change: N7H is more stable than N9H in H2O
N-Methyl-4-(4-nitrophenyl)-N-nitroso-1,3-thiazol-2-amine
The title compound, C10H8N4O3S, is almost planar [dihedral angle between the rings = 2.2 (2)°; r.m.s. deviation for the non-H atoms = 0.050 Å]. In the crystal, C—H...O and C—H...N hydrogen bonds link the molecules into (10-2) layers
Substituent Effect on the σ- and π‑Electron Structure of the Nitro Group and the Ring in <i>Meta</i>- and <i>Para</i>-Substituted Nitrobenzenes
An
application of quantum chemical modeling allowed us to investigate
a substituent effect on a σ and π electron structure of
a ring and the nitro group in a series of <i>meta</i>- and <i>para</i>-X-substituted nitrobenzene derivatives (X = NMe<sub>2</sub>, NHMe, NH<sub>2</sub>, OH, OMe, Me, H, F, Cl, CF<sub>3</sub>, CN, CHO, COMe, CONH<sub>2</sub>, COOH, NO<sub>2</sub>, and NO).
The obtained pEDA and sEDA parameters (the π- and σ-electron
structure characteristics of a given planar fragment of the system
obtained by the summation of π- and σ-orbital occupancies,
respectively) of the NO<sub>2</sub> group and the benzene ring allowed
us to reveal the impact of the substituents on their mutual relations
as well as to analyze them from the viewpoint of substituent characteristics.
The decisive factor for dependence of pEDA on sEDA of the ring is
electronegativity of the atom linking the substituent with the ring;
in subgroups an increase of sEDA is associated with a decrease of
pEDA. The obtained mutual relation between pEDAÂ(NO<sub>2</sub>) and
pEDAÂ(ring) characteristics documents strong resonance interactions
for electron-donating substituents in the <i>para</i> position.
The observed substituent effect on the σ-electron structure
of the nitro group, sEDAÂ(NO<sub>2</sub>), is significantly greater
(∼1.6 times) for <i>meta</i> derivatives than for
the <i>para</i> ones
Dependence of the Substituent Effect on Solvent Properties
The influence of
a solvent on the substituent effect (SE) in 1,4-disubstituted
derivatives of benzene (BEN), cyclohexa-1,3-diene (CHD), and bicyclo[2.2.2]Âoctane
(BCO) is studied by the use of polarizable continuum model method.
In all X–R–Y systems for the functional group Y (NO<sub>2</sub>, COOH, OH, and NH<sub>2</sub>), the following substituents
X have been chosen: NO<sub>2</sub>, CHO, H, OH, and NH<sub>2</sub>. The substituent effect is characterized by the charge of the substituent
active region (cSARÂ(X)), substituent effect stabilization energy (SESE),
and substituent constants σ or <i>F</i> descriptors,
the functional groups by cSARÂ(Y), whereas Ï€-electron delocalization
of transmitting moieties (BEN and CHD) is characterized by a geometry-based
index, harmonic oscillator model of aromaticity. All computations
were carried out by means of B3LYP/6-311++GÂ(d,p) method. An application
of quantum chemistry SE models (cSAR and SESE) allows to compare the
SE in water solutions and in the gas phase. Results of performed analyses
indicate an enhancement of the SE by water. The obtained Hammett-type
relationships document different nature of interactions between Y
and X in aromatic and olefinic systems (a coexistence of resonance
and inductive effects) than in saturated ones (only the inductive
effect). An increase of electric permittivity clearly enhances communications
between X and Y for BEN and CHD systems