Implicit geological modelling : a new approach to 3D volumetric national-scale geological models

This report provides information on implicit geological modelling and a possible application in the construction of national-scale (in the UK context) volumetric geological models. The stratigraphy of the UK is reviewed in the context of unconformity-bound stratigraphic sequences and how these can be applied in the modelling process. A range of input datasets are outlined with discussion on how these can be used and where gaps exist in available information. Model outputs are discussed highlighting the new opportunities offered by 3D stratigraphic grids. Some of the advantages and disadvantages of implicit modelling are discussed

Linking outcrop analogue with flow simulation to reduce uncertainty in sub-surface carbon capture and storage: an example from the Sherwood Sandstone Group of the Wessex Basin, UK

Modelling the behaviour of carbon dioxide (CO2) injected into sub-surface reservoirs as part of carbon capture and storage (CCS) strategies is often performed using models that incorporate very limited geological detail, particularly at the subseismic (metre to decametre) scale. Those modelling studies that incorporate varying degrees of geological realism show the inherent risks and uncertainties that can result from neglecting heterogeneity and reservoir–caprock topography along the migration path of an injected CO2 plume. A key problem is that detailed geological data are often not available for the relatively deep saline aquifers that are an important target for CCS. Deep saline aquifers fall between the relatively data-rich environments of shallow freshwater aquifers and hydrocarbon reservoirs and it is in these settings that outcrop analogues may play an important part in reducing the risks and uncertainties associated with CCS. This study uses an example from the Sherwood Sandstone Group (Otter Sandstone Formation) of the Wessex Basin to show how an outcrop study can impart a much greater understanding of heterogeneity in critical reservoir–caprock zones. Here the transition from the Sherwood Sandstone Group (fluvial sandstone reservoir) to the Mercia Mudstone Group (playa lacustrine mudstone seal) is not simple, but includes a major change in fluvial style that introduces considerable heterogeneity at the top of the reservoir. The study shows how laser-scanned outcrop can be used to rapidly construct static geological models that are taken through to flow simulations. In combination, the use of appropriate outcrop analogues and flow modelling can reduce the risks and uncertainties associated with CCS

Wavenumber Selection of Convection Rolls in a Box

The dynamics of two‐dimensional Rayleigh–Bénard convection rolls are studied in a finite layer with no‐slip, fixed temperature upper and lower boundaries and no‐slip insulating side walls. The dominant mechanism controlling the number of rolls seen in the layer is an instability concentrated near the side walls. This mechanism significantly narrows the band of stable wavenumbers although it can take a time comparable to the long (horizontal) diffusion time scale to operate

Rifts, rivers and climate recovery: a new model for the Triassic of England

Triassic basins of England developed under a regime of largely W–E extension and progressed from non-marine fluvial and aeolian sedimentation (Sherwood Sandstone Group), through marine-influenced playa lacustrine deposits (Mercia Mudstone Group) to marine environments (Penarth Group). A new tectono-stratigraphic model for the Sherwood Sandstone Group is proposed in which two major long-distance river systems developed under conditions of relative fault inactivity in the Early Triassic (Budleigh Salterton Pebble Beds and equivalent) and Middle Triassic (Otter Sandstone and equivalent). These are separated by a late Early Triassic syn-rift succession of fluvio–aeolian sandstones (Wildmoor Sandstone and Wilmslow Sandstone formations) and playa lacustrine muds (Nettlecombe Formation) which show major thickness variation and localisation with hanging wall basins. The partitioning of syn-rift deposits into mudstones within upstream basins (close to the source of water and sediment) and clean aeolian or fluvio–aeolian sandstones in downstream basins is similar to the pattern observed in the underlying late Permian. Under conditions of rapid tectonic subsidence chains of extensional basins may become disconnected with upstream basins (Wessex Basin) acting as traps for fines and water permitting more aeolian activity in temporarily unlinked downstream basins (Worcester and Cheshire basins). In addition to tectonic controls, fluctuating climate, relief related to limestone resilience in arid settings, the smoothing effect of fill and spill sedimentation and Tethyan sea-level change all contributed toward the observed Triassic stratigraphy in England

Assessing sampling of the fossil record in a geographically and stratigraphically constrained dataset: the Chalk Group of Hampshire, southern UK

Taphonomic, geological and sampling processes have been cited as biasing richness measurements in the fossil record, and sampling proxies have been widely used to assess this. However, the link between sampling and taxonomic richness is poorly understood, and there has been much debate on the equivalence and relevance of proxies. We approach this question by combining both historical and novel data: a historical fossil occurrence dataset with uniquely high spatial resolution from the Upper Cretaceous Chalk Group of Hampshire, UK, and a newly compiled 3D geological model that maps subsurface extent. The geological model provides rock volumes, and these are compared with exposure and outcrop area, sampling proxies that have often been conflated in previous studies. The extent to which exposure area (true rock availability) has changed over research time is also tested. We find a trend of low Cenomanian to high Turonian to Campanian raw richness, which correlates with, and is possibly driven by, the number of specimens found. After sampling standardization, an unexpected mid-Turonian peak diversity is recovered, and sampling-standardized genus richness is best predicted by rock volume, suggesting a species–area (or ‘genus–area’) effect. Additionally, total exposure area has changed over time, but relative exposure remains the same. Supplementary materials: A locality list, abundance matrix and all correlation and modelling results are available at https://doi.org/10.6084/m9.figshare.c.3592208

Assessing sampling of the fossil record in a geographically and stratigraphically constrained dataset: the Chalk Group of Hampshire, southern UK

Taphonomic, geological and sampling processes have been cited as biasing richness measurements in the fossil record, and sampling proxies have been widely used to assess this. However, the link between sampling and taxonomic richness is poorly understood, and there has been much debate on the equivalence and relevance of proxies. We approach this question by combining both historical and novel data: a historical fossil occurrence dataset with uniquely high spatial resolution from the Upper Cretaceous Chalk Group of Hampshire, UK, and a newly compiled 3D geological model that maps subsurface extent. The geological model provides rock volumes, and these are compared with exposure and outcrop area, sampling proxies that have often been conflated in previous studies. The extent to which exposure area (true rock availability) has changed over research time is also tested. We find a trend of low Cenomanian to high Turonian to Campanian raw richness, which correlates with, and is possibly driven by, the number of specimens found. After sampling standardization, an unexpected mid-Turonian peak diversity is recovered, and sampling-standardized genus richness is best predicted by rock volume, suggesting a species–area (or ‘genus–area’) effect. Additionally, total exposure area has changed over time, but relative exposure remains the same. Supplementary materials: A locality list, abundance matrix and all correlation and modelling results are available at https://doi.org/10.6084/m9.figshare.c.3592208

Discrete wetland groundwater discharges revealed with a three-dimensional temperature model and botanical indicators (Boxford, UK)

Wetlands provide unique goods and services, as habitats of high biodiversity. Hydrology is the principal control on wetland functioning; hence, understanding the water source is fundamental. However, groundwater inflows may be discrete and easily missed. Research techniques are required with low cost and minimal impact in sensitive settings. In this study, the effectiveness of using a three-dimensional (3D) temperature model and botanical indicators to characterise groundwater discharge is explored at the CEH (Centre for Ecology and Hydrology) River Lambourn Observatory, Boxford, UK. This comprises a 10 ha lowland riparian wetland, designated for its scientific interest and conservation value. Temperature data were collected in winter at multiple depths down to 0.9 m over approximately 3.6 ha and transformed into a 3D model via ordinary kriging. Anomalous warm zones indicated distinct areas of groundwater upwelling which were concurrent with relic channel structures. Lateral heat propagation from the channels was minimal and restricted to within 5–10 m. Vertical temperature sections within the channels suggest varying degrees of groundwater discharge along their length. Hydrochemical analysis showed that warmer peat waters were akin to deeper aquifer waters, confirming the temperature anomalies as areas of groundwater discharge. Subsequently, a targeted vegetation survey identified Carex paniculata as an indicator of groundwater discharge. The upwelling groundwater contains high concentrations of nitrate which is considered to support the spatially restricted growth of Carex paniculata against a background of poor fen communities located in reducing higher-phosphate waters

The hydrogen effects on materials program at NIST-Boulder

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Genetic and epigenetic regulation in Lingo-1 : Effects on cognitive function and white matter microstructure in a case-control study for schizophrenia

Leucine-rich repeat and immunoglobulin domain-containing protein (Lingo-1) plays a vital role in a large number of neuronal processes underlying learning and memory, which are known to be disrupted in schizophrenia. However, Lingo-1 has never been examined in the context of schizophrenia. The genetic association of a single-nucleotide polymorphism (SNP, rs3144) and methylation (CpG sites) in the Lingo-1 3′-UTR region was examined, with the testing of cognitive dysfunction and white matter (WM) integrity in a schizophrenia case-control cohort (n = 268/group). A large subset of subjects (97 control and 161 schizophrenia subjects) underwent structural magnetic resonance imaging (MRI) brain scans to assess WM integrity. Frequency of the rs3144 minor allele was overrepresented in the schizophrenia population (p = 0.03), with an odds ratio of 1.39 (95% CI 1.016–1.901). CpG sites surrounding rs3144 were hypermethylated in the control population (p = 0.032) compared to the schizophrenia group. rs3144 genotype was predictive of membership to a subclass of schizophrenia subjects with generalized cognitive deficits (p < 0.05), in addition to having associations with WM integrity (p = 0.018). This is the first study reporting a potential implication of genetic and epigenetic risk factors in Lingo-1 in schizophrenia. Both of these genetic and epigenetic alterations may also have associations with cognitive dysfunction and WM integrity in the context of the schizophrenia pathophysiology