Pyroxenite xenoliths from Marsabit (Northern Kenya): evidence for different magmatic events in the lithospheric mantle and interaction between peridotite and pyroxenite

Garnet-bearing and garnet-free pyroxenite xenoliths from Quaternary basanites of Marsabit, northern Kenya, were analysed for microstructures and mineral compositions (major and trace elements) to constrain the thermal and compositional evolution of the lithospheric mantle in this region. Garnet-bearing rocks are amphibole-bearing websterite with ~5-10 vol% orthopyroxene. Clinopyroxene is LREE-depleted and garnet has high HREE contents, in agreement with an origin as cumulates from basaltic mantle melts. Primary orthopyroxene inclusions in garnet suggest that the parental melts were orthopyroxene-saturated. Rock fabrics vary from weakly to strongly deformed. Thermobarometry indicates extensive decompression and cooling (~970-1,100°C at ~2.3-2.6GPa to ~700-800°C at ~0.5-1.0GPa) during deformation, best interpreted as pyroxenite intrusion into thick Paleozoic continental lithosphere subsequently followed by continental rifting (i.e., formation of the Mesozoic Anza Graben). During continental rifting, garnet websterites were decompressed (garnet-to-spinel transition) and experienced the same P-T evolution as their host peridotites. Strongly deformed samples show compositional overlaps with cpx-rich, initially garnet-bearing lherzolite, best explained by partial re-equilibration of peridotite and pyroxenite during deformation and mechanical mingling. In contrast, garnet-free pyroxenites include undeformed, cumulate-like samples, indicating that they are younger than the garnet websterites. Major and trace element compositions of clinopyroxene and calculated equilibrium melts suggest crystallisation from alkaline basaltic melt similar to the host basanite, which suggests formation in the context of alkaline magmatism during the development of the Kenya rif

Syros Metasomatic Tourmaline: Evidence for Very High-δ11B Fluids in Subduction Zones

High-pressure (HP) metamorphic blocks enclosed in a mafic to ultramafic matrix from a mélange on the island of Syros are rimmed by tourmaline-bearing reaction zones (blackwalls). The B isotopic composition of dravitic tourmaline within these blackwalls was investigated in situ by secondary ion mass spectrometry. Boron in these tourmalines is unusually heavy, with δ11B values exceeding +18‰ in all investigated samples and reaching an extreme value of +28·4‰ in one sample. Blackwalls formed during exhumation of the HP mélange at a depth of 20-25 km at temperatures of 400-430°C, by influx of external hydrous fluids. The compositions of the fluids are estimated to be in the range of 100-300 μg/g B with δ11B values of +18 to +28‰. The high δ11B values cannot be explained by tourmaline formation from unmodified slab-derived fluids. However, such fluids could interact with the material in the exhumation channel on their way from the dehydrating slab to the site of tourmaline formation in the blackwalls. This could produce exceptionally high δ11B values in the fluids, a case that is modelled in this study. The model demonstrates that subduction fluids may be effectively modified in both trace element and isotopic composition during their migration through the material overlying the subducting slab. Blackwall tourmaline from Syros has a large grain size (several centimetres), high abundance, and an exceptionally high δ11B value. The formation of tourmaline at the contact between mafic or felsic HP blocks and their ultramafic matrix involved fluids released during dehydration reactions in the subducting slab. It forms a heavy-boron reservoir in hybrid rocks overlying the subducting slab, and may, thus, have a significant impact on the geochemical cycle of B and its isotopes in subduction zone

Expression capable library for studies of Neisseria gonorrhoeae, version 1.0

Background The sexually transmitted disease, gonorrhea, is a serious health problem in developed as well as in developing countries, for which treatment continues to be a challenge. The recent completion of the genome sequence of the causative agent, Neisseria gonorrhoeae, opens up an entirely new set of approaches for studying this organism and the diseases it causes. Here, we describe the initial phases of the construction of an expression-capable clone set representing the protein-coding ORFs of the gonococcal genome using a recombination-based cloning system. Results The clone set thus far includes 1672 of the 2250 predicted ORFs of the N. gonorrhoeae genome, of which 1393 (83%) are sequence-validated. Included in this set are 48 of the 61 ORFs of the gonococcal genetic island of strain MS11, not present in the sequenced genome of strain FA1090. L-arabinose-inducible glutathione-S-transferase (GST)-fusions were constructed from random clones and each was shown to express a fusion protein of the predicted size following induction, demonstrating the use of the recombination cloning system. PCR amplicons of each ORF used in the cloning reactions were spotted onto glass slides to produce DNA microarrays representing 2035 genes of the gonococcal genome. Pilot experiments indicate that these arrays are suitable for the analysis of global gene expression in gonococci. Conclusion This archived set of Gateway® entry clones will facilitate high-throughput genomic and proteomic studies of gonococcal genes using a variety of expression and analysis systems. In addition, the DNA arrays produced will allow us to generate gene expression profiles of gonococci grown in a wide variety of conditions. Together, the resources produced in this work will facilitate experiments to dissect the molecular mechanisms of gonococcal pathogenesis on a global scale, and ultimately lead to the determination of the functions of unknown genes in the genome

Anharmonic Evolution of the Cosmic Axion Density Spectrum

We present analytic solutions to the spatially homogeneous axion field equation, using a model potential which strongly resembles the standard anharmonic $(1-\cos N\theta)$ potential, but contains only a piece-wise second order term. Our exactly soluble model for $\theta(t)$ spans the entire range $[-\pi/N,\pi/N]$. In particular, we are able to confirm (i) Turner's numeric correction factors \cite{Turner} to the adiabatic and harmonic analytic treatments of homogeneous axion oscillations, and (ii) Lyth's estimate \cite{Lyth} valid near the metastable misalignment angle $\pi/N$ at the peak of the potential. We compute the enhancement of axion density fluctuations that occurs when the axion mass becomes significant at $T\sim 1$ GeV. We find that the anharmonicity amplifies density \mbox{f}luctuations, but only significantly for relatively large initial misalignment angles. The enhancement factor is $\sim$ (2,3,4,13) for $\theta_{\rm in}\sim (0.85,0.90,0.95,0.99)\times\pi$.Comment: 26 pages, 6 figures appended as a ps-file, Latex, DAMTP-94-21, VAND-TH-94-

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

Partitioning and budget of Li, Be and B in high-pressure metamorphic rocks

Partitioning and budget of Li, Be and B in high-pressure metamorphic rocks from the island of Syros (Greece) were studied, using secondary ion mass spectrometry, inductively coupled plasma optical emission spectrometry and prompt gamma neutron activation analysis. Partitioning between coexisting mineral phases was found to be rather constant and independent of element concentrations. For several mineral pairs, apparent partition coefficients vary in a narrow range, while concentrations vary by more than an order of magnitude. Hence, it was possible to establish sets of inter-mineral partition coefficients for Li, Be and B among 15 different high-pressure minerals. This data set provides important information on the behaviour of the light elements in different lithologies within subducting slabs from the onset of metamorphism to the eclogite stage. It is essential for modelling trace-element and isotope fractionation during subduction and dehydration of oceanic crust

Detrital, metamorphic and metasomatic tourmaline in high-pressure metasediments from Syros (Greece): intra-grain boron isotope patterns determined by secondary-ion mass spectrometry

The boron isotopic composition of zoned tourmaline in two metasediments from the island of Syros, determined by secondary-ion mass spectrometry (SIMS), reflects the sedimentary and metamorphic record of the rocks. Tourmaline from a silicate-bearing marble contains small (≤20 μm) detrital cores with highly variable δ11B values (−10.7 to +3.6‰), pointing to a heterogeneous protolith derived from multiple sources. The sedimentary B isotopic record survived the entire metamorphic cycle with peak temperatures of ~500°C. Prograde to peak metamorphic rims are homogeneous and similar among all analysed grains (δ11B ≈ +0.9‰). The varying δ11B values of detrital cores in the siliceous marble demonstrate that in situ B isotope analysis of tourmaline by SIMS is a potentially powerful tool for provenance studies not only in sediments but also in metasediments. A meta-tuffitic blueschist bears abundant tourmaline with dravitic cores of detrital or authigenic origin (δ11B ≈ −3.3‰), and prograde to peak metamorphic overgrowth zones (−1.6‰). Fe-rich rims, formed during influx of B-bearing fluids under retrograde conditions, show strongly increasing δ11B values (up to +7.7‰) towards the margins of the grains. The δ11B values of metamorphic tourmaline from Syros, formed in mixed terrigenous–marine sediments, reflect the B signal blended from these two different sources, and was probably not altered by dehydration during subduction

Pyroxenite xenoliths from Marsabit (Northern Kenya): evidence for different magmatic events in the lithospheric mantle and interaction between peridotite and pyroxenite

Garnet-bearing and garnet-free pyroxenite xenoliths from Quaternary basanites of Marsabit, northern Kenya, were analysed for microstructures and mineral compositions (major and trace elements) to constrain the thermal and compositional evolution of the lithospheric mantle in this region. Garnet-bearing rocks are amphibole-bearing websterite with ~5–10 vol% orthopyroxene. Clinopyroxene is LREE-depleted and garnet has high HREE contents, in agreement with an origin as cumulates from basaltic mantle melts. Primary orthopyroxene inclusions in garnet suggest that the parental melts were orthopyroxene-saturated. Rock fabrics vary from weakly to strongly deformed. Thermobarometry indicates extensive decompression and cooling (~970–1,100°C at ~2.3–2.6 GPa to ~700–800°C at ~0.5–1.0 GPa) during deformation, best interpreted as pyroxenite intrusion into thick Paleozoic continental lithosphere subsequently followed by continental rifting (i.e., formation of the Mesozoic Anza Graben). During continental rifting, garnet websterites were decompressed (garnet-to-spinel transition) and experienced the same P–T evolution as their host peridotites. Strongly deformed samples show compositional overlaps with cpx-rich, initially garnet-bearing lherzolite, best explained by partial re-equilibration of peridotite and pyroxenite during deformation and mechanical mingling. In contrast, garnet-free pyroxenites include undeformed, cumulate-like samples, indicating that they are younger than the garnet websterites. Major and trace element compositions of clinopyroxene and calculated equilibrium melts suggest crystallisation from alkaline basaltic melt similar to the host basanite, which suggests formation in the context of alkaline magmatism during the development of the Kenya rift

53Mn-53Cr systematics of sphalerite in enstatite chondrites

We investigated the 53Mn-53Cr isotopic composition of a suite of enstatite chondrites by in situ analyses of various mineral phases with the Cameca IMS 1280-HR ion probe at Heidelberg, Germany, and a Cameca NanoSIMS at Paris, France. Only in sphalerite we found anomalies in 53Cr/52Cr-ratios correlating with 55Mn/52Cr which are due to decay of short-lived 53Mn (t1/2 = 3.7 Ma). A sphalerite in the EH-impact melt LAP 02225 showed the largest excess of 53Cr, with 53Cr/52Cr-ratios ranging up to 2.2. The calculated initial 53Mn/55Mn-ratios are within the range of previous Mn-Cr studies. We observed a spatial variation within a large sphalerite in LAP 02225, translating in distinct initial 53Mn/55Mn values. In case of the EL3 chondrite MAC 88136 the initial 53Mn/55Mn derived for one sphalerite is at the lower end of previously reported values and may reflect a variable influence of alteration-induced exchange of common Cr. This is supported by the total reset of the 53Cr/52Cr-ratio in another sphalerite in contact with an alteration vein irrespective of high Mn/Cr-ratios. Our observed initial 53Mn/55Mn-ratios of Sahara 97158, Indarch and EET 96135 correspond to the I-Xe systematics and hence, show that sphalerites can preserve reasonable age information. For Indarch however, if compared with other initial 53Mn/55Mn values from literature, a considerable scatter is obvious. This clearly demonstrates that the Mn-Cr system in sphalerite can be disturbed by various, still poorly investigated, processes (e.g., by thermal events, weathering, diffusion-controlled remobilization). Future application of Mn-Cr dating to sphalerite in enstatite chondrites thus requires a better understanding of how such processes influence the Mn-Cr systematics and demands for tools to identify the undoubtly present sphalerites carrying a true chronologic information