Underpinning Using Micropiles for Fragile Building Adjacent to Deep Excavation in Manhattan, New York

A deep excavation was to be carried out adjacent to a fragile building in weak ground. An underpinning scheme utilizing 250kips capacity micropiles socketed into the bedrock was designed to provide stability to the building during the excavation. In adopting the micropile system, the interior of the basement had to be retrofitted with a new reinforced concrete structural system of walls, slabs and beams to provide rigid framing for transfer of loads between the existing structural walls and the new micropiles. The micropiles were installed from inside the basement of the adjacent building under low headroom conditions. A preliminary load test on a sacrificial test pile was carried out to confirm the design assumptions for the rock socket bond strength achievable in the rock. The test pile was instrumented with five levels of strain gages to determine the load distribution along the pile. Evaluation of the load test results indicated that the rock socket bond strength achieved was 186.7psi and a minimum factor of safety of 2.15 was achievable for a 9ft long and 8.5ins diameter rock socket. The bedrock levels encountered during production drilling were highly variable. The maximum difference in the toe level of installed micropiles was 6.8ft

The Cognitive, Affective, and Somatic Empathy Scales (CASES): Cross-Cultural Replication and Specificity to Different Forms of Aggression and Victimization

A psychometrically sound measure of empathy that captures its multifaceted nature is critical in furthering research on empathy. The only instrument that assesses three domains of empathy together with positive and negative valence empathy is the newly developed 30-item cognitive, affective, and somatic empathy scales (CASES). The current study examines the cross-culture generalizability of CASES in Hong Kong and explores links between empathy and different forms of aggression and peer victimization. A sample of 4,676 Hong Kong youth (62% male) completed CASES, alongside measures of reactive/proactive aggression and multidimensional peer victimization. A subsample of youth (n = 2,321–2,464) and their parents completed additional instruments for testing the validity of CASES. We replicated most of the concurrent, convergent, and discriminant validity findings in the original development of CASES. Proactive aggression was most strongly linked to affective empathy, whereas reactive aggression was most strongly linked to somatic empathy. Differential associations were revealed between subscales of CASES and forms of peer victimization. Findings provide cross-cultural generalizability for a brief self-report instrument that captures the multifaceted nature of empathy. The multifaceted nature of empathy is further supported by differential associations with forms of aggression and victimization

Characterising two genomic islands involved in metabolism in Neisseria meningitidis

Meningococcal meningitis is endemic in sub-Saharan Africa while sporadic outbreaks burden the developed world by preying on the young and immunocompromised. The causal pathogen Neisseria meningitidis exclusively colonises the human nasopharynx. With a relatively concise genome, it can invade across multiple bodily compartments, which can be highly debilitating and life-threatening. Nine genomic “islands” have been identified in N. meningitidis and N. gonorrhoeae, absent from their commensal cousin N. lactamica. Many are predicted to have roles in bacterial transport, metabolism and regulation. Genomic Island 5 contains three genes and was correctly annotated to encode enzymes involved in the synthesis of the polyamine putrescine, protecting bacteria from oxidative stress. Mutant N. meningitidis lacking these genes grew poorly in rich media. The lesion can be restored by putrescine supplementation or gene complementation. Genomic Island 3 contains two genes poorly annotated to be spermidine-synthesising – a higher polyamine. Mutant N. meningitidis lacking these genes, however, grew poorly in chemically-defined media. Shuffling amino acid profiles and culturing with a labelled arginine isotope suggest a role in the acquisition and metabolism of arginine and glutamine, which are key to meningococcal maintenance. Enhanced systems circumventing host resource-denial, scavenging amino acids and resisting challenges from free radicals are examples of virulence. These islands are believed to support the general fitness of N. meningitidis as a highly competitive commensal but paradoxically “accidental” pathogen, where disease is a likely a result of risk-taking lifestyles in response to complex microenvironment changes. This behaviour is contrasted by N. gonorrhoeae which prefers recurrent infection episodes and long-term establishment. The closely-related but phenotypically diverse members of the Neisseria genus hence serve as research foci of much interest. In a broader sense, investigating why meningococci conserve such pathogen-specific sequences may help inspire new clinical strategies and provide alternative perspectives towards the biology of similar organisms

Aurignacian dynamics in Southeastern Europe based on spatial analysis, sediment geochemistry, raw materials, lithic analysis, and use-wear from Românești-Dumbrăvița

The Aurignacian is one of the first cultural-technological traditions commonly associated with the expansion of Homo sapiens in Europe. Early Homo sapiens demographics across the continent are therefore typically inferred using the distribution of Aurignacian assemblages. Western Romania has been used as a tie-point to connect the well-researched lithic assemblages from the eastern Mediterranean and Western Europe through its early Homo sapiens fossils. However, Romania's archeological record remains underexplored thereby hindering our ability to directly connect better understood regions through time and space. Here we report on excavations from the open-air Middle/Upper Paleolithic site of Romanesti-Dumbravista I in southwestern Romania. Three stratified Paleolithic assemblages were extensively excavated within a 1-m-thick eolian-deposited sequence. Spatial, geochemical, raw material, techno-typological, and use-wear analysis of the site reveal patterns of artifact configuration, resource exploitation, fire history, knapping objectives, and functionality. Taken together, Romanesti-Dumbravista I is the first well-contextualized archeological site in close spatiotemporal proximity to many early, well-preserved human fossils and in East-Central Europe.info:eu-repo/semantics/publishedVersio

Optical correlation techniques for the investigation of colloidal systems

This review aims to provide a simple introduction to the application of optical correlation methods in colloidal science. In particular, I plan to show that full appraisal of the intimate relation between light scattering and microscopy allows designing novel powerful investigation techniques that combine their powers. An extended version of this paper will appear in "ColloidalFoundations of Nanoscience", edited by D. Berti and G. Palazzo, Elsevier (ISBN 978-0-444-59541-6). I am very grateful to the publisher for having granted me the permission to post this preprint on arXiv.Comment: 19 pages, 5 figure

The risk of false inclusion of a relative in parentage testing – an in silico population study

Aim To investigate the potential of false inclusion of a close genetic relative in paternity testing by using computer generated families. Methods 10 000 computer-simulated families over three generations were generated based on genotypes using 15 short tandem repeat loci. These data were used in assessing the probability of inclusion or exclusion of paternity when the father is actually a sibling, grandparent, uncle, half sibling, cousin, or a random male. Further, we considered a duo case where the mother’s DNA type was not available and a trio case including the mother’s profile. Results The data showed that the duo scenario had the highest and lowest false inclusion rates when considering a sibling (19.03 ± 0.77%) and a cousin (0.51 ± 0.14%) as the father, respectively; and the rate when considering a random male was much lower (0.04 ± 0.04%). The situation altered slightly with a trio case where the highest rate (0.56 ± 0.15%) occurred when a paternal uncle was considered as the father, and the lowest rate (0.03 ± 0.03%) occurred when a cousin was considered as the father. We also report on the distribution of the numbers for non-conformity (non-matching loci) where the father is a close genetic relative. Conclusions The results highlight the risk of false inclusion in parentage testing. These data provide a valuable reference when incorporating either a mutation in the father’s DNA type or if a close relative is included as being the father; particularly when there are varying numbers of non-matching loci

A novel strategy for sibship determination in trio sibling model

Aim To use a virtually simulated population, generated from published allele frequencies based on 15 short tandem repeats (STR), to evaluate the efficacy of trio sibship testing and sibling assignment for forensic purposes. Methods Virtual populations were generated using 15 STR loci to create a large number of related and unrelated genotypes (10 000 trio combinations). Using these virtual populations, the probability of related and unrelated profiles can be compared to determine the chance of inclusions of being siblings if they are true siblings and the chance of inclusion if they are unrelated. Two specific relationships were tested – two reference siblings were compared to a third true sibling (3S trio, sibling trio) and two reference siblings were compared to an unrelated individual (2S1U trio, non-sibling trio). Results When the likelihood ratio was greater than 1, 99.87% of siblings in the 3S trio population were considered as siblings (sensitivity); 99.88% of non-siblings in the 2S1U trio population were considered as non-siblings (specificity); 99.9% of both populations were identified correctly as siblings and non-siblings; and the accuracy of the test was 99.88%. Conclusions The high sensitivity and specificity figures when using two known siblings compared to a putative sibling are significantly greater than when using only one known relative. The data also support the use of increasing number of loci allowing for greater confidence in genetic identification. The system established in this study could be used as the model for evaluating and simulating the cases with multiple relatives

Short exposure to photo-oxidative damage triggers molecular signals indicative of early retinal degeneration

IntroductionAge-related macular degeneration (AMD) is the leading cause of blindness in the developed world, currently affecting over 350 billion people globally. For the most prevalent late-stage form of this disease, atrophic AMD, there are no available prevention strategies or treatments, in part due to inherent difficulties in early-stage diagnosis. Photo-oxidative damage is a well-established model for studying inflammatory and cell death features that occur in late-stage atrophic AMD, however to date has not been investigated as a potential model for studying early features of disease onset. Therefore, in this study we aimed to determine if short exposure to photo-oxidative damage could be used to induce early retinal molecular changes and advance this as a potential model for studying early-stage AMD.MethodsC57BL/6J mice were exposed to 1, 3, 6, 12, or 24h photo-oxidative damage (PD) using 100k lux bright white light. Mice were compared to dim-reared (DR) healthy controls as well as mice which had undergone long periods of photo-oxidative damage (3d and 5d-PD) as known timepoints for inducing late-stage retinal degeneration pathologies. Cell death and retinal inflammation were measured using immunohistochemistry and qRT-PCR. To identify retinal molecular changes, retinal lysates were sent for RNA sequencing, following which bioinformatics analyses including differential expression and pathway analyses were performed. Finally, to investigate modulations in gene regulation as a consequence of degeneration, microRNA (miRNA) expression patterns were quantified using qRT-PCR and visualized using in situ hybridization.ResultsShort exposure to photo-oxidative damage (1-24h-PD) induced early molecular changes in the retina, with progressive downregulation of homeostatic pathways including metabolism, transport and phototransduction observed across this time-course. Inflammatory pathway upregulation was observed from 3h-PD, preceding observable levels of microglia/macrophage activation which was noted from 6h-PD, as well as significant photoreceptor row loss from 24h-PD. Further rapid and dynamic movement of inflammatory regulator miRNA, miR-124-3p and miR-155-5p, was visualized in the retina in response to degeneration.ConclusionThese results support the use of short exposure to photo-oxidative damage as a model of early AMD and suggest that early inflammatory changes in the retina may contribute to pathological features of AMD progression including immune cell activation and photoreceptor cell death. We suggest that early intervention of these inflammatory pathways by targeting miRNA such as miR-124-3p and miR-155-5p or their target genes may prevent progression into late-stage pathology

A novel strategy for sibship determination in trio sibling model

Aim To use a virtually simulated population, generated from published allele frequencies based on 15 short tandem repeats (STR), to evaluate the efficacy of trio sibship testing and sibling assignment for forensic purposes. Methods Virtual populations were generated using 15 STR loci to create a large number of related and unrelated genotypes (10 000 trio combinations). Using these virtual populations, the probability of related and unrelated profiles can be compared to determine the chance of inclusions of being siblings if they are true siblings and the chance of inclusion if they are unrelated. Two specific relationships were tested – two reference siblings were compared to a third true sibling (3S trio, sibling trio) and two reference siblings were compared to an unrelated individual (2S1U trio, non-sibling trio). Results When the likelihood ratio was greater than 1, 99.87% of siblings in the 3S trio population were considered as siblings (sensitivity); 99.88% of non-siblings in the 2S1U trio population were considered as non-siblings (specificity); 99.9% of both populations were identified correctly as siblings and non-siblings; and the accuracy of the test was 99.88%. Conclusions The high sensitivity and specificity figures when using two known siblings compared to a putative sibling are significantly greater than when using only one known relative. The data also support the use of increasing number of loci allowing for greater confidence in genetic identification. The system established in this study could be used as the model for evaluating and simulating the cases with multiple relatives