3,647 research outputs found
Simulation of Tail Weight Distributions in Biological Year 1986–2006 Landings of Brown Shrimp, Farfantepenaeus aztecus, from the Northern Gulf of Mexico Fishery
Size distribution within re-
ported landings is an important aspect of northern Gulf of Mexico penaeid shrimp stock assessments. It reflects shrimp population characteristics such as numerical abundance of various sizes, age structure, and vital rates (e.g. recruitment, growth, and mortality), as well as effects of fishing, fishing power, fishing practices, sampling, size-grading, etc.
The usual measure of shrimp size in archived landings data is count (C) the number of shrimp tails (abdomen or edible portion) per pound (0.4536 kg). Shrimp are marketed and landings reported in pounds within tail count categories. Statistically, these count categories are count class intervals or bins with upper and lower limits expressed in C. Count categories vary in width, overlap, and frequency of occurrence within the landings. The upper and lower limits of most count class intervals can be transformed to lower and upper limits (respectively) of class intervals expressed in pounds per shrimp tail, w, the reciprocal of C (i.e. w = 1/C).
Age based stock assessments have relied on various algorithms to estimate numbers of shrimp from pounds landed within count categories. These algorithms required un-
derlying explicit or implicit assumptions about the distribution of C or w. However, no attempts were made to assess the actual distribution of C or w. Therefore, validity of the algorithms and assumptions could not be determined. When different algorithms were applied to landings within the same size categories, they produced different estimates of numbers of shrimp.
This paper demonstrates a method of simulating the distribution of w in reported biological year landings of shrimp. We used, as examples, landings of brown shrimp, Farfantepenaeus aztecus, from the northern Gulf of Mexico fishery in biological years 1986–2006. Brown shrimp biological year, Ti, is defined as beginning on 1 May of the same calendar year as Ti and ending on 30 April of the next calendar year, where subscript i is the place marker for biological year. Biological year landings encompass most if not all of the brown shrimp life cycle and life span. Simulated distributions of w reflect all factors influencing sizes of brown shrimp in the landings within a given biological year. Our method does not require a priori assumptions about the parent distributions of
w or C, and it takes into account the variability in width, overlap, and frequency of occurrence of count categories within the landings. Simulated biological year distributions of w can be transformed to equivalent distributions of C.
Our method may be useful in future testing of previously applied algorithms and development of new estimators based on statistical estimation theory and the underlying distribution of w or C. We also examine some applications of biological year distributions of w, and additional variables derived from them
Effect of social status of dairy heifers on expression of estrus and subsequent fertility
A study was conducted to determine if social status of heifers within a herd influences estrus activity and subsequent fertility. Thirty cyclic dairy heifers were observed over a 14 d period and ranked by social status, based on a displacement index. The estrous cycles of the heifers were synchronized by treatment with two injections of prostaglandin F2a (PGF2a; Lutalyse, 25 mg) given 14 d apart. At the second PGF2a injection, HeatWatch transmitters were placed on the heifers for continuous monitoring of mounting (estrus) activity over the next 45 d. All heifers were artificially inseminated at estrus, using semen from a single sire. Pregnancy status was determined by ultrasonography post-insemination. For analysis, heifers were placed into three groups based on social status. Subordinate heifers, ranked in the bottom one-third of the herd, exhibited a shorter estrus (P = 0.001) than more dominant heifers. The number of mounts recorded during estrus declined with decreasing social status (P = 0.009). There was a trend for the number of mounts per h to be greatest for heifers in the top one-third of the social hierarchy (P = 0.074). Of those heifers detected in estrus and inseminated, pregnancy rate was similar among the social groups for the first and subsequent inseminations (P = 0.315 and 0.608, respectively). Preliminary results indicate that social hierarchy of dairy heifers influences length and expression of estrus. However, social standing within the herd does not influence fertility of heifers detected in estru
Basement structure of the northern Ontong Java Plateau
Site surveys conducted in conjunction with Leg 130 on the Ontong Java Plateau reveal a strong seismic reflector at 0.8 to 1.0 s below the seafloor that drilling at Sites 803 and 807 confirmed is Cretaceous basalt. This reflector is generally smooth, except for the northeastern margin of the plateau, where it forms a series of small, irregularly shaped depressions. Correlatable reflectors present at the bottom of the depressions are also present on the adjacent highs, suggesting that these depressions are original volcanic topography. A strong sub-basalt reflector occurs on many seismic profiles on the northeastern portion of the plateau. This reflection may be caused by a density and velocity contrast between pillow lavas and flood basalt flows or it may result from interbedded sediment and thus may represent significant lulls in volcanic activity. The presence of sub-basalt reflectors near Site 803 may indicate that later volcanic episodes occurred there, in contrast to Site 807, where this reflector was not observed and where older basalt ages were obtained
Distribution and Status of the Brazilian Free-tailed Bat (Tadarida brasiliensis cynocephala) in Arkansas
Investigations of building infestations, mist netting activities, and specimens submitted to the Arkansas Department of Health document the Brazilian free-tailed bat to be found in 14 Arkansas counties. Both overwintering and maternity colonies were examined. Numbers of individuals ranged from one to several thousand
Assessing the Benefits of Public Research Within an Economic Framework: The Case of USDA's Agricultural Research Service
Evaluation of publicly funded research can help provide accountability and prioritize programs. In addition, Federal intramural research planning generally involves an institutional assessment of the appropriate Federal role, if any, and whether the research should be left to others, such as universities or the private sector. Many methods of evaluation are available, peer review—used primarily for establishing scientific merit—being the most common. Economic analysis focuses on quantifying ultimate research outcomes, whether measured in goods with market prices or in nonmarket goods such as environmental quality or human health. However, standard economic techniques may not be amenable for evaluating some important public research priorities or for institutional assessments. This report reviews quantitative methods and applies qualitative economic reasoning and stakeholder interviewing methods to the evaluation of economic benefits of Federal intramural research using three case studies of research conducted by USDA’s Agricultural Research Service (ARS). Differences among the case studies highlight the need to select suitable assessment techniques from available methodologies, the limited scope for comparing assessment results across programs, and the inherent difficulty in quantifying benefits in some research areas. When measurement and attribution issues make it difficult to quantify these benefits, the report discusses how qualitative insights based on economic concepts can help research prioritization.Agricultural Research Service, Federal intramural research, publicly funded research, Environmental Economics and Policy, Food Consumption/Nutrition/Food Safety, Livestock Production/Industries, Productivity Analysis,
Investigation of nanodispersion in polystyrene-montmorillonite nanocomposites by solid state NMR
Nanocomposites result from combinations of materials with vastly different properties in the nanometer scale. These materials exhibit many unique properties such as improved thermal stability, reduced flammability, and improved mechanical properties. Many of the properties associated with polymer–clay nanocomposites are a function of the extent of exfoliation of the individual clay sheets or the quality of the nanodispersion. This work demonstrates that solid-state NMR can be used to characterize, quantitatively, the nanodispersion of variously modified montmorillonite (MMT) clays in polystyrene (PS) matrices. The direct influence of the paramagnetic Fe3, embedded in the aluminosilicate layers of MMT, on polymer protons within about 1 nm from the clay surfaces creates relaxation sources, which, via spin diffusion, significantly shorten the overall proton longitudinal relaxation time (T1 H). Deoxygenated samples were used to avoid the particularly strong contribution to the T1 H of PS from paramagnetic molecular oxygen. We used T1 H as an indicator of the nanodispersion of the clay in PS. This approach correlated reasonably well with X-ray diffraction and transmission electron microscopy (TEM) data. A model for interpreting the saturation-recovery data is proposed such that two parameters relating to the dispersion can be extracted. The first parameter, f, is the fraction of the potentially available clay surface that has been transformed into polymer–clay interfaces. The second parameter is a relative measure of the homogeneity of the dispersion of these actual polymer–clay interfaces. Finally, a quick assay of T1 H is reported for samples equilibrated with atmospheric oxygen. Included are these samples as well as 28 PS/MMT nanocomposite samples prepared by extrusion. These measurements are related to the development of highthroughput characterization techniques. This approach gives qualitative indications about dispersion; however, the more time-consuming analysis, of a few deoxygenated samples from this latter set, offers significantly greater insight into the clay dispersion. A second, probably superior, rapid-analysis method, applicable to oxygen-containing samples, is also demonstrated that should yield a reasonable estimate of the f parameter. Thus, for PS/MMT nanocomposites, one has the choice of a less complete NMR assay of dispersion that is significantly faster than TEM analysis, versus a slower and more complete NMR analysis with sample times comparable to TEM, information rivaling that of TEM, and a substantial advantage that this is a bulk characterization method. © 2003 Wiley Periodicals, Inc.* J Polym Sci Part B: Polym Phys 41: 3188–3213, 200
A common cardiac sodium channel variant associated with sudden infant death in African Americans, SCN5A S1103Y.
Thousands die each year from sudden infant death syndrome (SIDS). Neither the cause nor basis for varied prevalence in different populations is understood. While 2 cases have been associated with mutations in type Valpha, cardiac voltage-gated sodium channels (SCN5A), the "Back to Sleep" campaign has decreased SIDS prevalence, consistent with a role for environmental influences in disease pathogenesis. Here we studied SCN5A in African Americans. Three of 133 SIDS cases were homozygous for the variant S1103Y. Among controls, 120 of 1,056 were carriers of the heterozygous genotype, which was previously associated with increased risk for arrhythmia in adults. This suggests that infants with 2 copies of S1103Y have a 24-fold increased risk for SIDS. Variant Y1103 channels were found to operate normally under baseline conditions in vitro. As risk factors for SIDS include apnea and respiratory acidosis, Y1103 and wild-type channels were subjected to lowered intracellular pH. Only Y1103 channels gained abnormal function, demonstrating late reopenings suppressible by the drug mexiletine. The variant appeared to confer susceptibility to acidosis-induced arrhythmia, a gene-environment interaction. Overall, homozygous and rare heterozygous SCN5A missense variants were found in approximately 5% of cases. If our findings are replicated, prospective genetic testing of SIDS cases and screening with counseling for at-risk families warrant consideration
The Santa Fe Light Cone Simulation Project: I. Confusion and the WHIM in Upcoming Sunyaev-Zel'dovich Effect Surveys
We present the first results from a new generation of simulated large sky
coverage (~100 square degrees) Sunyaev-Zeldovich effect (SZE) cluster surveys
using the cosmological adaptive mesh refinement N-body/hydro code Enzo. We have
simulated a very large (512^3h^{-3}Mpc^3) volume with unprecedented dynamic
range. We have generated simulated light cones to match the resolution and
sensitivity of current and future SZE instruments. Unlike many previous studies
of this type, our simulation includes unbound gas, where an appreciable
fraction of the baryons in the universe reside.
We have found that cluster line-of-sight overlap may be a significant issue
in upcoming single-dish SZE surveys. Smaller beam surveys (~1 arcmin) have more
than one massive cluster within a beam diameter 5-10% of the time, and a larger
beam experiment like Planck has multiple clusters per beam 60% of the time. We
explore the contribution of unresolved halos and unbound gas to the SZE
signature at the maximum decrement. We find that there is a contribution from
gas outside clusters of ~16% per object on average for upcoming surveys. This
adds both bias and scatter to the deduced value of the integrated SZE, adding
difficulty in accurately calibrating a cluster Y-M relationship.
Finally, we find that in images where objects with M > 5x10^{13} M_{\odot}
have had their SZE signatures removed, roughly a third of the total SZE flux
still remains. This gas exists at least partially in the Warm Hot Intergalactic
Medium (WHIM), and will possibly be detectable with the upcoming generation of
SZE surveys.Comment: 14 pages, 13 figures, version accepted to ApJ. Major revisions mad
A Cutoff in the X-ray Fluctuation Power Density Spectrum of the Seyfert 1 Galaxy NGC 3516
During 1997 March-July, XTE observed the bright, strongly variable Seyfert 1
galaxy NGC 3516 once every ~12.8 hr for 4.5 months and nearly continuously
(with interruptions due to SAA passage but not Earth occultation) for a 4.2 day
period in the middle. These were followed by ongoing monitoring once every ~4.3
days. These data are used to construct the first well-determined X-ray
fluctuation power density spectrum (PDS) of an active galaxy to span more than
4 decades of usable temporal frequency. The PDS shows no signs of any strict or
quasi-periodicity, but does show a progressive flattening of the power-law
slope from -1.74 at short time scales to -0.73 at longer time scales. This is
the clearest observation to date of the long-predicted cutoff in the PDS. The
characteristic variability time scale corresponding to this cutoff temporal
frequency is 1 month. Although it is unclear how this time scale may be
interpreted in terms of a physical size or process, there are several promising
candidate models. The PDS appears similar to those seen for Galactic black hole
candidates such as Cyg X-1, suggesting that these two classes of objects with
very different luminosities and putative black hole masses (differing by more
than a factor of 10^5) may have similar X-ray generation processes and
structures.Comment: 21 pages, incl. 5 figures, AASTe
Examining the Relationships Between Acculturation Orientations, Perceived and Actual Norms, and Drinking Behaviors of Short-Term American Sojourners in Foreign Environments
As little research has examined factors influencing increased and heavy drinking behavior among American sojourners abroad, this study was designed to examine how acculturation orientations (i.e., separation versus assimilation), host country per capita drinking rates, and perceptions about the drinking behavior among other sojourners and natives in the host country predicted alcohol risk abroad. A sample of 216 American college students completing study abroad programs completed a pre-abroad questionnaire to document their pre-abroad drinking levels, followed by a post-return questionnaire to assess drinking while abroad, acculturation orientations and perceived norms of drinking behavior within the foreign environment. A dichotomous variable was created to compare United States (U.S.) per capita drinking rates with those of the host country. Hierarchical repeated-measures ANOVAs examined the changes in drinking from pre-abroad to abroad levels. Participants studying in countries with higher drinking rates than the U.S. and those with higher perceptions about the drinking behavior in the country increased their drinking to a greater extent. Those with higher separation acculturation orientations and greater perceptions drank at heavier levels while abroad. Participants with a greater assimilation orientation and higher perceptions about native drinking, as well as those with a greater separation orientation and higher perceptions about other students’ alcohol use drank the heaviest while abroad. These findings have implications for future preventive work with American students and other sojourning groups to promote pre-abroad knowledge of more accurate drinking norms and greater engagement in the culture to potentially prevent increased and heavier drinking
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