Comparative transcriptomic analysis of plum fruit treated with 1-MCP

Microarray technology has allowed the large scale transcriptomic analysis of fruit ripening. The μPEACH1.0 microarray containing 4,806 probes corresponding to genes expressed in peach fruit tissues has been used in a heterologous fashion in two studies of plums ripening behavior. Gene expression of different cultivars of plums treated with the ethylene antagonist, 1-methylcyclopropene (1-MCP) and stored for short periods at room temperature or for longer periods of cold storage was examined. In the first study, mature fruit of a suppressed ethylene climacteric cultivar 'Shiro' and a cultivar characterized by a typical increase of ethylene production during ripening ('Santa Rosa') were harvested and incubated for 24h in air (control) or 1-MCP and allowed to ripen at room temperature. Different levels of transcripts of genes implicated in cell wall metabolism, hormone (ethylene and auxin) regulation, stress and defense, and in the transcription/translation machinery, as well as others involved with ripening were identified. In the second study, the effects of 1-MCP on gene expression in relation to the development of chilling injury (CI) in the climacteric cultivars 'Ruby Red' (RR) and 'October Sun' (OS) and 'Zee Lady' peaches (ZP) were analyzed. The fruit were treated for 24h at room temperature with 1-MCP prior to storage at 0°C. For RR, there was no significant effect of 1-MCP on the level of CI symptoms, while 1-MCP significantly reduced CI symptoms in OS fruit and an increase of CI in treated ZP fruit. Microarray analysis showed that immediately following treatment, 186, 134 and 56 genes were differentially expressed between the control and 1-MCP-treated fruit of these cultivars, respectively: after 4 weeks cold storage, 311, 52 and 224 genes for RR, OS and ZP, respectively, were differentially expressed between control and treated fruit. Thus, for OS, the number of differentially expressed genes reduced during storage while the number increased in RR and ZP. Comparisons of the data suggest that the transcript profile is altered by 1-MCP more in plums than peaches. These studies, carried out within an international collaborative network, will increase our understanding of the regulation of pathways involved in plum fruit ripening and in metabolic processes related to storage and shelf lif

Investigations into the molecular and physiological factors influencing low temperature breakdown in stonefruit

Cold storage is essential for the successful distribution of stonefruit to distant markets; however most cultivars suffer chilling injury (CI), commonly referred to as low temperature breakdown (LTB). LTB is a significant problem for industry and the genetic factors responsible for its onset are not understood. Treatment of stonefruit with the ethylene antagonist, 1-methylcyclopropene (1-MCP) before cold storage has been shown to differentially affect the development of CI in peaches and plums. 1-MCP treatment increases the incidence of LTB in peaches but reduces it in plums (Fernández-Trujillo and Artés, 1997; Fan et al., 2002). These observations were confirmed and preliminary research into the effects of 1-MCP and cold storage on gene expression is reported herein

Novel model of neuronal bioenergetics: postsynaptic utilization of glucose but not lactate correlates positively with Ca2+ signalling in cultured mouse glutamatergic neurons

We have previously investigated the relative roles of extracellular glucose and lactate as fuels for glutamatergic neurons during synaptic activity. The conclusion from these studies was that cultured glutamatergic neurons utilize glucose rather than lactate during NMDA (N-methyl-d-aspartate)-induced synaptic activity and that lactate alone is not able to support neurotransmitter glutamate homoeostasis. Subsequently, a model was proposed to explain these results at the cellular level. In brief, the intermittent rises in intracellular Ca2+ during activation cause influx of Ca2+ into the mitochondrial matrix thus activating the tricarboxylic acid cycle dehydrogenases. This will lead to a lower activity of the MASH (malate–aspartate shuttle), which in turn will result in anaerobic glycolysis and lactate production rather than lactate utilization. In the present work, we have investigated the effect of an ionomycin-induced increase in intracellular Ca2+ (i.e. independent of synaptic activity) on neuronal energy metabolism employing 13C-labelled glucose and lactate and subsequent mass spectrometric analysis of labelling in glutamate, alanine and lactate. The results demonstrate that glucose utilization is positively correlated with intracellular Ca2+ whereas lactate utilization is not. This result lends further support for a significant role of glucose in neuronal bioenergetics and that Ca2+ signalling may control the switch between glucose and lactate utilization during synaptic activity. Based on the results, we propose a compartmentalized CiMASH (Ca2+-induced limitation of the MASH) model that includes intracellular compartmentation of glucose and lactate metabolism. We define pre- and post-synaptic compartments metabolizing glucose and glucose plus lactate respectively in which the latter displays a positive correlation between oxidative metabolism of glucose and Ca2+ signalling

Impact of tree training system, branch type and position in the canopy on the ripening homogeneity of 'Abbé Fétel' pear fruit.

In pear, fruit ripening is not homogeneous, which leads to problems in harvest and storage management. To identify factors affecting the ripening homogeneity, structural, biochemical and molecular parameters were investigated. Fruit were sampled from trees trained with three different systems, spindle, V-shaped and bi-axis, and were further grouped on the basis of canopy position (top or bottom) and branch type (short-old-spurs, 3-year-old or older branches, 2-year-old branches and twigs). This study confirmed that the position in the canopy plays a crucial role in fruit ripening in V-shaped and bi-axis training systems. Fruit on the spindle training system was unaffected by the position of the canopy, albeit showing a large variability within the fruit of each part of the canopy. Such variability is much lower in the bi-axis and V-shaped systems. The spindle training system had no similarity in homogeneity indices between the molecular and physiological measurements. Partial Least Square Discriminate Analysis (PLS-DA) showed differences in training system, branch type and canopy position separated by the different physiological and molecular parameters. Short-old-spurs and twigs had the highest homogeneity and least variability in all training systems and branch types. In addition, Partial Least Square Path Modelling (PLS-PM) was able to identify a high correlation between physiological measurements and ripening compared to that of molecular data