Tropospheric forcing of the boreal polar vortex splitting in January 2003

e dynamical evolution of the relatively warm stratospheric winter season 2002–2003 in the Northern Hemisphere was studied and compared with the cold winter 2004–2005 based on NCEP-Reanalyses. Record low temperatures were observed in the lower and middle stratosphere over the Arctic region only at the beginning of the 2002–2003 winter. Six sudden stratospheric warming events, including the major warming event with a splitting of the polar vortex in mid-January 2003, have been identified. This led to a very high vacillation of the zonal mean circulation and a weakening of the stratospheric polar vortex over the whole winter season. An estimate of the mean chemical ozone destruction inside the polar vortex showed a total ozone loss of about 45 DU in winter 2002–2003; that is about 2.5 times smaller than in winter 2004–2005. Embedded in a winter with high wave activity, we found two subtropical Rossby wave trains in the troposphere before the major sudden stratospheric warming event in January 2003. These Rossby waves propagated north-eastwards and maintained two upper tropospheric anticyclones. At the same time, the amplification of an upward propagating planetary wave 2 in the upper troposphere and lower stratosphere was observed, which could be caused primarily by those two wave trains. Furthermore, two extratropical Rossby wave trains over the North Pacific Ocean and North America were identified a couple of days later, which contribute mainly to the vertical planetary wave activity flux just before and during the major warming event. It is shown that these different tropospheric forcing processes caused the major warming event and contributed to the splitting of the polar vortex

Anti-West Nile virus activity of in vitro expanded human primary natural killer cells

<p>Abstract</p> <p>Background</p> <p>Natural Killer (NK) cells are a crucial component of the host innate immune system with anti-viral and anti-cancer properties. However, the role of NK cells in West Nile virus (WNV) infection is controversial, with reported effects ranging from active suppression of virus to no effect at all. It was previously shown that K562-mb15-41BBL (K562D2) cells, which express IL-15 and 4-1BBL on the K562 cell surface, were able to expand and activate human primary NK cells of normal peripheral blood mononuclear cells (PBMC). The expanded NK cells were tested for their ability to inhibit WNV infection <it>in vitro</it>.</p> <p>Results</p> <p>Co-culture of PBMC with irradiated K562D2 cells expanded the NK cell number by 2-3 logs in 2-3 weeks, with more than 90% purity; upregulated NK cell surface activation receptors; downregulated inhibitory receptors; and boosted interferon gamma (IFN-γ) production by ~33 fold. The expanded NK (D2NK) cell has strong natural killing activity against both K562 and Vero cells, and killed the WNV infected Vero cells through antibody-dependent cellular cytotoxicity (ADCC). The D2NK cell culture supernatants inhibited both WNV replication and WNV induced cytopathic effect (CPE) in Vero cells when added before or after infection. Anti-IFN-γ neutralizing antibody blocked the NK supernatant-mediated anti-WNV effect, demonstrating a noncytolytic activity mediated through IFN-γ.</p> <p>Conclusions</p> <p>Co-culture of PBMC with K562D2 stimulatory cells is an efficient technique to prepare large quantities of pure and active NK cells, and these expanded NK cells inhibited WNV infection of Vero cells through both cytolytic and noncytolytic activities, which may imply a potential role of NK cells in combating WNV infection.</p

Structure of a lectin from Canavalia gladiata seeds: new structural insights for old molecules

<p>Abstract</p> <p>Background</p> <p>Lectins are mainly described as simple carbohydrate-binding proteins. Previous studies have tried to identify other binding sites, which possible recognize plant hormones, secondary metabolites, and isolated amino acid residues. We report the crystal structure of a lectin isolated from <it>Canavalia gladiata </it>seeds (CGL), describing a new binding pocket, which may be related to pathogen resistance activity in ConA-like lectins; a site where a non-protein amino-acid, α-aminobutyric acid (Abu), is bound.</p> <p>Results</p> <p>The overall structure of native CGL and complexed with α-methyl-mannoside and Abu have been refined at 2.3 Å and 2.31 Å resolution, respectively. Analysis of the electron density maps of the CGL structure shows clearly the presence of Abu, which was confirmed by mass spectrometry.</p> <p>Conclusion</p> <p>The presence of Abu in a plant lectin structure strongly indicates the ability of lectins on carrying secondary metabolites. Comparison of the amino acids composing the site with other legume lectins revealed that this site is conserved, providing an evidence of the biological relevance of this site. This new action of lectins strengthens their role in defense mechanisms in plants.</p

Large-Scale Flow and the Long-Lasting Blocking High over Russia: Summer 2010

Several studies show that the anomalous long-lasting Russian heat wave during the summer of 2010, linked to a long-persistent blocking high, appears mainly as a result of natural atmospheric variability. This study analyzes the large-scale flow structure based on the ECMWF Re-Analysis Interim (ERA-Interim) data (1989-2010). The anomalous long-lasting blocking high over western Russia including the heat wave occurs as an overlay of a set of anticyclonic contributions on different time scales. (i) A regime change in ENSO toward La Nina modulates the quasi-stationary wave structure in the boreal summer hemisphere supporting the eastern European blocking. The polar Arctic dipole mode is enhanced and shows a projection on the mean blocking high. (ii) Together with the quasi-stationary wave anomaly, the transient eddies maintain the long-lasting blocking. (iii) Three different pathways of wave action are identified on the intermediate time scale (similar to 10-60 days). One pathway commences over the eastern North Pacific and includes the polar Arctic region; another one runs more southward and crossing the North Atlantic, continues to eastern Europe; a third pathway southeast of the blocking high describes the downstream development over South Asia