An Outlook on the Localisation and Structure-Function Relationships of R Proteins in Solanum

The co-evolution of plants and plant-pathogens shaped a multi-layered defence system in plants, in which Resistance proteins (R proteins) play a significant role. A fundamental understanding of the functioning of these R proteins and their position in the broader defence system of the plant is essential. Sub-project 3 of the BIOEXPLOIT programme studies how R proteins are activated upon effector recognition and how recognition is conveyed in resistance signalling pathways, using the solanaceous R proteins Rx1 (from S. tuberosum spp. andigena; conferring extreme resistance against Potato Virus X), I-2 (from S. lycopersicon; mediating resistance to Fusarium oxysporum) and Mi-1.2 (from S. lycopersicon; conferring resistance to Meloidogyne incognita) as model systems. The results obtained in this project will serve as a model for other R proteins and will be translated to potential applications or alternative strategies for disease resistance. These include the modification of the recognition specificity of R proteins with the aim to obtain broad spectrum resistance to major pathogens in potato

Flow probe of symmetry energy in relativistic heavy-ion reactions

Flow observables in heavy-ion reactions at incident energies up to about 1 GeV per nucleon have been shown to be very useful for investigating the reaction dynamics and for determining the parameters of reaction models based on transport theory. In particular, the elliptic flow in collisions of neutron-rich heavy-ion systems emerges as an observable sensitive to the strength of the symmetry energy at supra-saturation densities. The comparison of ratios or differences of neutron and proton flows or neutron and hydrogen flows with predictions of transport models favors an approximately linear density dependence, consistent with ab-initio nuclear-matter theories. Extensive parameter searches have shown that the model dependence is comparable to the uncertainties of existing experimental data. Comprehensive new flow data of high accuracy, partly also through providing stronger constraints on model parameters, can thus be expected to improve our knowledge of the equation of state of asymmetric nuclear matter.Comment: 20 pages, 24 figures, review to appear in EPJA special volume on nuclear symmetry energ

Using Gaussian Processes for Rumour Stance Classification in Social Media

Social media tend to be rife with rumours while new reports are released piecemeal during breaking news. Interestingly, one can mine multiple reactions expressed by social media users in those situations, exploring their stance towards rumours, ultimately enabling the flagging of highly disputed rumours as being potentially false. In this work, we set out to develop an automated, supervised classifier that uses multi-task learning to classify the stance expressed in each individual tweet in a rumourous conversation as either supporting, denying or questioning the rumour. Using a classifier based on Gaussian Processes, and exploring its effectiveness on two datasets with very different characteristics and varying distributions of stances, we show that our approach consistently outperforms competitive baseline classifiers. Our classifier is especially effective in estimating the distribution of different types of stance associated with a given rumour, which we set forth as a desired characteristic for a rumour-tracking system that will warn both ordinary users of Twitter and professional news practitioners when a rumour is being rebutted

Biorefinery approach for lignocellulosic biomass valorisation with an acidic ionic liquid

ABSTRACT: The commercialisation of the biorefinery approach involving the integration of the multi-step valorisation of low value biomass feedstock into a variety of chemicals, fuels and bioproducts is still very limited. In this context, the present work proposes an advanced methodology that comprises a cascaded approach towards wheat straw valorisation. The studied concept lies in the employment of an aqueous solution of the acidic 1-ethyl-3-methylimidazolium hydrogen sulfate ionic liquid in a selective and efficient hydrolysis of the hemicellulose fraction of wheat straw into pentoses, namely xylose and arabinose. An experimental design was utilised to search for the optimisation parameters, resulting in a maximum 80.5 wt% pentose yield in the liquor. Furthermore, the remaining solid, which contained practically all of the initial cellulose and lignin, was processed by considering two scenarios: (i) a direct enzymatic hydrolysis of the reaction solid, which yielded 75.8 mol% glucose; or (ii) a preceding extraction of lignin followed by enzymatic saccharification of the cellulose pulp, which yielded 91.3 mol% glucose. For both scenarios, lignin-rich solid fractions were obtained with distinct purities and yields. Additionally, the second scenario allowed producing a stream of value-added aromatic (phenolic) compounds. This work also overcame the challenges in IL recycling and reuse, with a simultaneous recovery of the pentoses from the reaction liquor as high as 88.6 mol%.info:eu-repo/semantics/publishedVersio

Prevalence of ocular demodicosis and ocular surface conditions in patients selected for cataract surgery

The aim of the study was to analyze the prevalence of ocular demodicosis and ocular surface conditions in patients selected for cataract surgery. Eyelashes from 73 patients selected for cataract surgery were evaluated at × 40 and × 100 magnification using light microscopy. The anterior segment was assessed with the slit lamp. Additionally, Schirmer I and break up time (BUT) tests were carried out before surgery and 1 and 3 months postoperatively. A specially designed questionnaire containing e.g. information about chronic skin and eye diseases, previous ophthalmic surgeries, and patient's hygiene habits was used to assess the demographic variables. A majority of patients were at the age of 70–79 years, and there were more females (83%) in the study group. Demodex folliculorum was found in 48% of the patients. There was a correlation between the number of parasites and the presence of blepharitis, discharge at eyelid margins, and conjunctival hyperemia. Schirmer I and BUT test results were lower in patients with Demodex infestation before and after cataract surgery. The higher number of mites was correlated with lower Schirmer I test results postoperatively. The presence of Demodex mites influences the conjunctiva and lid margins leading to inflammation. The higher number of Demodex mites disturbs the tear film over time after cataract surgery