489 research outputs found
Scanning tunneling microscopy and spectroscopy at low temperatures of the (110) surface of Te doped GaAs single crystals
We have performed voltage dependent imaging and spatially resolved
spectroscopy on the (110) surface of Te doped GaAs single crystals with a low
temperature scanning tunneling microscope (STM). A large fraction of the
observed defects are identified as Te dopant atoms which can be observed down
to the fifth subsurface layer. For negative sample voltages, the dopant atoms
are surrounded by Friedel charge density oscillations. Spatially resolved
spectroscopy above the dopant atoms and above defect free areas of the GaAs
(110) surface reveals the presence of conductance peaks inside the
semiconductor band gap. The appearance of the peaks can be linked to charges
residing on states which are localized within the tunnel junction area. We show
that these localized states can be present on the doped GaAs surface as well as
at the STM tip apex.Comment: 8 pages, 8 figures, accepted for publication in PR
Electronic structure and the minimum conductance of a graphene layer on SiO2 from density-functional methods.
The effect of the SiO substrate on a graphene film is investigated using
realistic but computationally convenient energy-optimized models of the
substrate supporting a layer of graphene. The electronic bands are calculated
using density-functional methods for several model substrates. This provides an
estimate of the substrate-charge effects on the behaviour of the bands near
, as well as a variation of the equilibrium distance of the graphene
sheet. A model of a wavy graphene layer is examined as a possible candidate for
understanding the nature of the minimally conducting states in graphene.Comment: 6 pages, 5 figure
Interplay between edge states and simple bulk defects in graphene nanoribbons
We study the interplay between the edge states and a single impurity in a
zigzag graphene nanoribbon. We use tight-binding exact diagonalization
techniques, as well as density functional theory calculations to obtain the
eigenvalue spectrum, the eigenfunctions, as well the dependence of the local
density of states (LDOS) on energy and position. We note that roughly half of
the unperturbed eigenstates in the spectrum of the finite-size ribbon hybridize
with the impurity state, and the corresponding eigenvalues are shifted with
respect to their unperturbed values. The maximum shift and hybridization occur
for a state whose energy is inverse proportional to the impurity potential;
this energy is that of the impurity peak in the DOS spectrum. We find that the
interference between the impurity and the edge gives rise to peculiar
modifications of the LDOS of the nanoribbon, in particular to oscillations of
the edge LDOS. These effects depend on the size of the system, and decay with
the distance between the edge and the impurity.Comment: 10 pages, 15 figures, revtex
Exploring cloud-based platforms for rapid insar time series analysis
The idea of near real-time deformation analysis using Synthetic Aperture Radar (SAR) data as a response to natural and anthropogenic disasters has been an interesting topic in the last years. A major limiting factor for this purpose has been the non-availability of both spatially and temporally homogeneous SAR datasets. This has now been resolved thanks to the SAR data provided by the Sentinel-1A/B missions, freely available at a global scale via the Copernicus program of the European Space Agency (ESA). Efficient InSAR analysis in the era of Sentinel demands working with cloud-based platforms to tackle problems posed by large volumes of data. In this study, we explore a variety of existing cloud-based platforms for Multioral Interferometric SAR (MTI) analysis and discuss their opportunities and limitations
Land subsidence hazard in iran revealed by country-scale analysis of sentinel-1 insar
Many areas across Iran are subject to land subsidence, a sign of exceeding stress due to the over-extraction of groundwater during the past decades. This paper uses a huge dataset of Sentinel-1, acquired since 2014 in 66 image frames of 250×250km, to identify and monitor land subsidence across Iran. Using a two-step time series analysis, we first identify subsidence zones at a medium scale of 100m across the country. For the first time, our results provide a comprehensive nationwide map of subsidence in Iran and recognize its spatial distribution and magnitude. Then, in the second step of analysis, we quantify the deformation time series at the highest possible resolution to study its impact on civil infrastructure. The results spots the hazard posed by land subsidence to different infrastructure. Examples of road and railways affected by land subsidence hazard in Tehran and Mashhad, two of the most populated cities in Iran, are presented in this study
Calcium rubies: A family of red-emitting functionalizable indicators suitable for two-photon Ca2+ imaging
We designed Calcium Rubies, a family of functionalizable BAPTA-based red-fluorescent calcium (Ca2+) indicators as new tools for biological Ca2+ imaging. The specificity of this Ca2+-indicator family is its side arm, attached on the ethylene glycol bridge that allows coupling the indicator to various groups while leaving open the possibility of aromatic substitutions on the BAPTA core for tuning the Ca2+-binding affinity. Using this possibility we now synthesize and characterize three different CaRubies with affinities between 3 and 22 μM. Their long excitation and emission wavelengths (peaks at 586/604 nm) allow their use in otherwise challenging multicolor experiments, e.g., when combining Ca2+ uncaging or optogenetic stimulation with Ca2+ imaging in cells expressing fluorescent proteins. We illustrate this capacity by the detection of Ca2+ transients evoked by blue light in cultured astrocytes expressing CatCh, a light-sensitive Ca2+-translocating channelrhodopsin linked to yellow fluorescent protein. Using time-correlated single-photon counting, we measured fluorescence lifetimes for all CaRubies and demonstrate a 10-fold increase in the average lifetime upon Ca2+ chelation. Since only the fluorescence quantum yield but not the absorbance of the CaRubies is Ca2+-dependent, calibrated two-photon fluorescence excitation measurements of absolute Ca2+ concentrations are feasible. © 2012 American Chemical Society
Clar's Theory, STM Images, and Geometry of Graphene Nanoribbons
We show that Clar's theory of the aromatic sextet is a simple and powerful
tool to predict the stability, the \pi-electron distribution, the geometry, the
electronic/magnetic structure of graphene nanoribbons with different hydrogen
edge terminations. We use density functional theory to obtain the equilibrium
atomic positions, simulated scanning tunneling microscopy (STM) images, edge
energies, band gaps, and edge-induced strains of graphene ribbons that we
analyze in terms of Clar formulas. Based on their Clar representation, we
propose a classification scheme for graphene ribbons that groups configurations
with similar bond length alternations, STM patterns, and Raman spectra. Our
simulations show how STM images and Raman spectra can be used to identify the
type of edge termination
Lineage Divergence and Historical Gene Flow in the Chinese Horseshoe Bat (Rhinolophus sinicus)
PMCID: PMC3581519This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited
Electronic properties of bilayer and multilayer graphene
We study the effects of site dilution disorder on the electronic properties
in graphene multilayers, in particular the bilayer and the infinite stack. The
simplicity of the model allows for an easy implementation of the coherent
potential approximation and some analytical results. Within the model we
compute the self-energies, the density of states and the spectral functions.
Moreover, we obtain the frequency and temperature dependence of the
conductivity as well as the DC conductivity. The c-axis response is
unconventional in the sense that impurities increase the response for low
enough doping. We also study the problem of impurities in the biased graphene
bilayer.Comment: 36 pages, 42 figures, references adde
The Genomic Signature of Crop-Wild Introgression in Maize
The evolutionary significance of hybridization and subsequent introgression
has long been appreciated, but evaluation of the genome-wide effects of these
phenomena has only recently become possible. Crop-wild study systems represent
ideal opportunities to examine evolution through hybridization. For example,
maize and the conspecific wild teosinte Zea mays ssp. mexicana, (hereafter,
mexicana) are known to hybridize in the fields of highland Mexico. Despite
widespread evidence of gene flow, maize and mexicana maintain distinct
morphologies and have done so in sympatry for thousands of years. Neither the
genomic extent nor the evolutionary importance of introgression between these
taxa is understood. In this study we assessed patterns of genome-wide
introgression based on 39,029 single nucleotide polymorphisms genotyped in 189
individuals from nine sympatric maize-mexicana populations and reference
allopatric populations. While portions of the maize and mexicana genomes were
particularly resistant to introgression (notably near known
cross-incompatibility and domestication loci), we detected widespread evidence
for introgression in both directions of gene flow. Through further
characterization of these regions and preliminary growth chamber experiments,
we found evidence suggestive of the incorporation of adaptive mexicana alleles
into maize during its expansion to the highlands of central Mexico. In
contrast, very little evidence was found for adaptive introgression from maize
to mexicana. The methods we have applied here can be replicated widely, and
such analyses have the potential to greatly informing our understanding of
evolution through introgressive hybridization. Crop species, due to their
exceptional genomic resources and frequent histories of spread into sympatry
with relatives, should be particularly influential in these studies
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