Staying in the science stream: patterns of participation in A-level science subjects in the UK.

This paper describes patterns of participation and attainment in A-level physics, chemistry and biology from 1961 to 2009. The A-level has long been seen as an important gateway qualification for higher level study, particularly in the sciences. This long term overview examines how recruitment to these three subjects has changed in the context of numerous policies and initiatives that seek to retain more young people in the sciences. The results show that recruitment to the pure sciences has stagnated, general trends have hardly varied and the track record of government policy in influencing change is not strong. There is no evidence for increasing achievement gaps between the sexes at A-level and even national policy requiring that all young people study science up to the age of 16 appears to have had little impact on recruitment at this leve

Wildlife Toxicology: Environmental Contaminants and Their National and International Regulation

Wildlife toxicology is the study of potentially harmful effects of toxic agents in wild animals, focusing on amphibians, reptiles, birds, and mammals. Fish and aquatic invertebrates are not usually included as part of wildlife toxicology since they fall within the field of aquatic toxicology, but collectively both disciplines often provide inSight into one another and both are integral parts of ecotoxicology (Hoffman et al. 2003). It entails monitoring, hypothesis testing, forensics, and risk assessment; encompasses molecular through ecosystem responses and various research venues (laboratory, mesocosm, field); and has been shaped by chemical use and misuse, ecological mishaps, and biomedical research. While human toxicology can be traced to ancient Egypt, wildlife toxicology dates back to the late 19th century, when unintentional poisoning of birds from ingestion oflead shot and predator control agents, alkali poisoning, and die-offs from oil spills appeared in the popular and scientific literature (Rattner 2009)

Wildlife Toxicology: Environmental Contaminants and Their National and International Regulation

Wildlife toxicology is the study of potentially harmful effects of toxic agents in wild animals, focusing on amphibians, reptiles, birds, and mammals. Fish and aquatic invertebrates are not usually included as part of wildlife toxicology since they fall within the field of aquatic toxicology, but collectively both disciplines often provide inSight into one another and both are integral parts of ecotoxicology (Hoffman et al. 2003). It entails monitoring, hypothesis testing, forensics, and risk assessment; encompasses molecular through ecosystem responses and various research venues (laboratory, mesocosm, field); and has been shaped by chemical use and misuse, ecological mishaps, and biomedical research. While human toxicology can be traced to ancient Egypt, wildlife toxicology dates back to the late 19th century, when unintentional poisoning of birds from ingestion oflead shot and predator control agents, alkali poisoning, and die-offs from oil spills appeared in the popular and scientific literature (Rattner 2009)

Single Nucleotide Polymorphism–Based Validation of Exonic Splicing Enhancers

Because deleterious alleles arising from mutation are filtered by natural selection, mutations that create such alleles will be underrepresented in the set of common genetic variation existing in a population at any given time. Here, we describe an approach based on this idea called VERIFY (variant elimination reinforces functionality), which can be used to assess the extent of natural selection acting on an oligonucleotide motif or set of motifs predicted to have biological activity. As an application of this approach, we analyzed a set of 238 hexanucleotides previously predicted to have exonic splicing enhancer (ESE) activity in human exons using the relative enhancer and silencer classification by unanimous enrichment (RESCUE)-ESE method. Aligning the single nucleotide polymorphisms (SNPs) from the public human SNP database to the chimpanzee genome allowed inference of the direction of the mutations that created present-day SNPs. Analyzing the set of SNPs that overlap RESCUE-ESE hexamers, we conclude that nearly one-fifth of the mutations that disrupt predicted ESEs have been eliminated by natural selection (odds ratio = 0.82 ± 0.05). This selection is strongest for the predicted ESEs that are located near splice sites. Our results demonstrate a novel approach for quantifying the extent of natural selection acting on candidate functional motifs and also suggest certain features of mutations/SNPs, such as proximity to the splice site and disruption or alteration of predicted ESEs, that should be useful in identifying variants that might cause a biological phenotype

Molecular serotyping and virulence potential of Listeria monocytogenes isolated from bovine, swine and human in the province of Quebec

Listeria monocytogenes (L mono) cause rare but critical diseases, particularly for at risk population that include pregnant women. Food-borne origin of listeriosis is clearly recognised only since 1984. Since then, a great number of grouped cases occurred and milk or meat products, particularly pork meat, were implicated. Management of this zoonotic pathogen considers all strains as at equal risk. Recently a new perspective for characterisation of strain virulence was allowed since unaltered sequence of InlA was recognised as a key for strain virulence

Correlation between microstructure and magnetotransport in organic semiconductor spin valve structures

We have studied magnetotransport in organic-inorganic hybrid multilayer junctions. In these devices, the organic semiconductor (OSC) Alq$_3$ (tris(8-hydroxyquinoline) aluminum) formed a spacer layer between ferromagnetic (FM) Co and Fe layers. The thickness of the Alq$_3$ layer was in the range of 50-150 nm. Positive magnetoresistance (MR) was observed at 4.2 K in a current perpendicular to plane geometry, and these effects persisted up to room temperature. The devices' microstructure was studied by X-ray reflectometry, Auger electron spectroscopy and polarized neutron reflectometry (PNR). The films show well-defined layers with modest average chemical roughness (3-5 nm) at the interface between the Alq$_3$ and the surrounding FM layers. Reflectometry shows that larger MR effects are associated with smaller FM/Alq$_3$ interface width (both chemical and magnetic) and a magnetically dead layer at the Alq$_3$/Fe interface. The PNR data also show that the Co layer, which was deposited on top of the Alq$_3$, adopts a multi-domain magnetic structure at low field and a perfect anti-parallel state is not obtained. The origins of the observed MR are discussed and attributed to spin coherent transport. A lower bound for the spin diffusion length in Alq$_3$ was estimated as $43 \pm 5$ nm at 80 K. However, the subtle correlations between microstructure and magnetotransport indicate the importance of interfacial effects in these systems.Comment: 21 pages, 11 figures and 2 table

Whole genome sequencing of methicillin-resistant and methicillin-sensitive Staphylococcus aureus isolated from 4 horses in a veterinary teaching hospital and its ambulatory service

Genomic characterization was conducted on 2 methicillin-resistant Staphylococcus aureus (MRSA) strains isolated from 2 horses hospitalized during an overlapping period of time and 2 methicillin-sensitive S. aureus (MSSA) strains isolated from 2 distinct horses. Phylogenetic proximity was traced and the genotypic and phenotypic characteristics of the antimicrobial resistance of the strains were compared. Whole genome sequencing of MRSA strains for this report was similar but differed from whole genome sequencing of MSSA strains. The MRSA strains were closely related, belonging to sequence type (ST) 612, spa type t1257, and SCCmec type IVd2B. The MSSA strains were also closely related, belonging to ST1660, spa type t3043, and having no detectable staphylococcal cassette chromosome mec elements. All MSRA and MSSA strains were Panton-Valentine leukocidin negative. There were discrepancies in the genotypic analysis and the antimicrobial susceptibility testing (phenotypic analysis) of MRSA strains for rifampin, trimethoprim-sulfamethoxazole, gentamicin, amikacin, and enrofloxacin.La caractérisation génomique a été effectuée sur deux souches de Staphylococcus aureus résistantes à la méticilline (SARM) isolées de deux chevaux hospitalisés sur une période de chevauchement, et de deux S. aureus sensibles à la méticilline (SASM) isolés de deux chevaux distincts. Leur proximité phylogénétique a été retracée. Les caractéristiques génotypiques et phénotypiques de la résistance aux antimicrobiens de ces souches ont été comparées. Le séquençage complet du génome des souches de SARM pour ce rapport était similaire, mais différent du séquençage complet du génome des souches de SASM. Les souches de SARM étaient étroitement apparentées, appartenant à la séquence type (ST) 612, au spa type t1257 et au SCCmec type IVd2B. Les souches MSSA étaient étroitement apparentées appartenant au ST1660, spa type t3043 et aucun élément de la cassette contenant le gène mec n’a été détecté. Toutes les souches MSRA et MSSA étaient négatives pour la leucocidine Panton-Valentine. Il y avait des divergences entre l’analyse génotypique et les tests de sensibilité aux antimicrobiens (phénotype) des souches de SARM pour la rifampicine, le triméthoprime-sulfaméthoxazole, la gentamicine, l’amikacine et l’enrofloxacine

Mitochondrial-nuclear cross-talk in the human brain is modulated by cell type and perturbed in neurodegenerative disease

Mitochondrial dysfunction contributes to the pathogenesis of many neurodegenerative diseases. The mitochondrial genome encodes core respiratory chain proteins, but the vast majority of mitochondrial proteins are nuclear-encoded, making interactions between the two genomes vital for cell function. Here, we examine these relationships by comparing mitochondrial and nuclear gene expression across different regions of the human brain in healthy and disease cohorts. We find strong regional patterns that are modulated by cell-type and reflect functional specialisation. Nuclear genes causally implicated in sporadic Parkinson's and Alzheimer's disease (AD) show much stronger relationships with the mitochondrial genome than expected by chance, and mitochondrial-nuclear relationships are highly perturbed in AD cases, particularly through synaptic and lysosomal pathways, potentially implicating the regulation of energy balance and removal of dysfunction mitochondria in the etiology or progression of the disease. Finally, we present MitoNuclearCOEXPlorer, a tool to interrogate key mitochondria-nuclear relationships in multi-dimensional brain data

Impacts of colistin sulfate on fecal Escherichia coli resistance and on growth performance of piglets in a post-weaning diarrhea model

Colistin sulfate (CS) is used in Canada for the treatment of post weaning diarrhea (PWD), to overcome conventional therapeutic antibiotics failures. The aim of the present study was to determine the effect of a conventional oral regimen of CS for the treatment of PWD, on the development of E. coli CS resistance and to evaluate the effect of ETEC: F4 infection on CS intestinal absorption. A total of 48 pigs were used, challenge was carried out by oral administration of 109CFU of a hemolytic ETEC: F4 strain resistant to nalidixic acid. CS was administered at a dose of 50.000 UI/kg twice a day for 5 days. Feces were examined clinically and bacteriologically before and after challenge to evaluate presence of diarrhea and E. coli fecal excretion. ETEC: F4 virulence factors were monitored and CS plasma concentrations were quantified by an HPLC-MS/MS. From one until six days after CS administration, a significant reduction in the fecal excretion of ETEC: F4, total E. coli, ETEC: F4 virulence factors and in diarrhea scores was observed in the challenged treated group compared to the challenged untreated group (p\u3c0.0001). No significant difference in growth performances was observed in treated compared to non-treated pigs (p\u3e0.71). A significant selection pressure on E. coli total population was observed following CS treatment (p\u3c0.0001). Challenge with ETEC: F4 resulted in an increase in intestinal absorption of CS. Our study is the first to demonstrate in an experimental model of PWD, that CS at a dose of 50,000 IU/kg is effective in reducing fecal excretion of E. coli. However, this regimen was associated with a selection pressure on E. coli CS resistance, and did not improve growth performance in challenged pigs. Thus, the use of this antibiotic in pig should be revised

A nonlinear Quasi-3D approach for the modeling of mufflers with perforated elements and sound-absorbing material

Increasing demands on the capabilities of engine thermo-�uid dynamic simulation and the ability to accurately predict both performance and acoustics have led to the development of several approaches, ranging from fully 3D to simpli�ed 1D models. e quasi-3D approach is proposed as a compromise between the time-demanding 3D CFD analysis and the fast 1D approach; it allows to model the acoustics of intake and exhaust system components, used in internal combustion engines, resorting to a 3D network of 0D cells. Due to its 3D nature, the model predicts high-order modes, improving the accuracy at high frequencies with respect to conventional plane-wave approaches. e conservation equations of mass and energy are solved at cell centers, whereas the momentum equation is applied to cell connections including speci�c source term to account for the of sound-absorbing materials and perforated elements. e quasi-3D approach has been validated by comparing the predicted transmission loss to measured data for a number of standard con�gurations typical of internal combustion engine exhaust systems: a reverse-�ow chamber and series chambers with perforates and resistive material