A Penrose polynomial for embedded graphs

We extend the Penrose polynomial, originally defined only for plane graphs, to graphs embedded in arbitrary surfaces. Considering this Penrose polynomial of embedded graphs leads to new identities and relations for the Penrose polynomial which can not be realized within the class of plane graphs. In particular, by exploiting connections with the transition polynomial and the ribbon group action, we find a deletion-contraction-type relation for the Penrose polynomial. We relate the Penrose polynomial of an orientable checkerboard colourable graph to the circuit partition polynomial of its medial graph and use this to find new combinatorial interpretations of the Penrose polynomial. We also show that the Penrose polynomial of a plane graph G can be expressed as a sum of chromatic polynomials of twisted duals of G. This allows us to obtain a new reformulation of the Four Colour Theorem

Shot noise in the chaotic-to-regular crossover regime

We investigate the shot noise for phase-coherent quantum transport in the chaotic-to-regular crossover regime. Employing the Modular Recursive Green's Function Method for both ballistic and disordered two-dimensional cavities we find the Fano factor and the transmission eigenvalue distribution for regular systems to be surprisingly similar to those for chaotic systems. We argue that in the case of regular dynamics in the cavity, diffraction at the lead openings is the dominant source of shot noise. We also explore the onset of the crossover from quantum to classical transport and develop a quasi-classical transport model for shot noise suppression which agrees with the numerical quantum data.Comment: 4 pages, 3 figures, submitted to Phys.Rev.Let

Spectral Orbits and Peak-to-Average Power Ratio of Boolean Functions with respect to the {I,H,N}^n Transform

We enumerate the inequivalent self-dual additive codes over GF(4) of blocklength n, thereby extending the sequence A090899 in The On-Line Encyclopedia of Integer Sequences from n = 9 to n = 12. These codes have a well-known interpretation as quantum codes. They can also be represented by graphs, where a simple graph operation generates the orbits of equivalent codes. We highlight the regularity and structure of some graphs that correspond to codes with high distance. The codes can also be interpreted as quadratic Boolean functions, where inequivalence takes on a spectral meaning. In this context we define PAR_IHN, peak-to-average power ratio with respect to the {I,H,N}^n transform set. We prove that PAR_IHN of a Boolean function is equivalent to the the size of the maximum independent set over the associated orbit of graphs. Finally we propose a construction technique to generate Boolean functions with low PAR_IHN and algebraic degree higher than 2.Comment: Presented at Sequences and Their Applications, SETA'04, Seoul, South Korea, October 2004. 17 pages, 10 figure

Imaging geometry through dynamics: the observable representation

For many stochastic processes there is an underlying coordinate space, $V$, with the process moving from point to point in $V$ or on variables (such as spin configurations) defined with respect to $V$. There is a matrix of transition probabilities (whether between points in $V$ or between variables defined on $V$) and we focus on its ``slow'' eigenvectors, those with eigenvalues closest to that of the stationary eigenvector. These eigenvectors are the ``observables,'' and they can be used to recover geometrical features of $V$

Minimum and maximum against k lies

A neat 1972 result of Pohl asserts that [3n/2]-2 comparisons are sufficient, and also necessary in the worst case, for finding both the minimum and the maximum of an n-element totally ordered set. The set is accessed via an oracle for pairwise comparisons. More recently, the problem has been studied in the context of the Renyi-Ulam liar games, where the oracle may give up to k false answers. For large k, an upper bound due to Aigner shows that (k+O(\sqrt{k}))n comparisons suffice. We improve on this by providing an algorithm with at most (k+1+C)n+O(k^3) comparisons for some constant C. The known lower bounds are of the form (k+1+c_k)n-D, for some constant D, where c_0=0.5, c_1=23/32=0.71875, and c_k=\Omega(2^{-5k/4}) as k goes to infinity.Comment: 11 pages, 3 figure

The Cop Number of the One-Cop-Moves Game on Planar Graphs

Cops and robbers is a vertex-pursuit game played on graphs. In the classical cops-and-robbers game, a set of cops and a robber occupy the vertices of the graph and move alternately along the graph's edges with perfect information about each other's positions. If a cop eventually occupies the same vertex as the robber, then the cops win; the robber wins if she can indefinitely evade capture. Aigner and Frommer established that in every connected planar graph, three cops are sufficient to capture a single robber. In this paper, we consider a recently studied variant of the cops-and-robbers game, alternately called the one-active-cop game, one-cop-moves game or the lazy-cops-and-robbers game, where at most one cop can move during any round. We show that Aigner and Frommer's result does not generalise to this game variant by constructing a connected planar graph on which a robber can indefinitely evade three cops in the one-cop-moves game. This answers a question recently raised by Sullivan, Townsend and Werzanski.Comment: 32 page

How to share a quantum secret

We investigate the concept of quantum secret sharing. In a ((k,n)) threshold scheme, a secret quantum state is divided into n shares such that any k of those shares can be used to reconstruct the secret, but any set of k-1 or fewer shares contains absolutely no information about the secret. We show that the only constraint on the existence of threshold schemes comes from the quantum "no-cloning theorem", which requires that n < 2k, and, in all such cases, we give an efficient construction of a ((k,n)) threshold scheme. We also explore similarities and differences between quantum secret sharing schemes and quantum error-correcting codes. One remarkable difference is that, while most existing quantum codes encode pure states as pure states, quantum secret sharing schemes must use mixed states in some cases. For example, if k <= n < 2k-1 then any ((k,n)) threshold scheme must distribute information that is globally in a mixed state.Comment: 5 pages, REVTeX, submitted to PR

Relations between M\"obius and coboundary polynomial

It is known that, in general, the coboundary polynomial and the M\"obius polynomial of a matroid do not determine each other. Less is known about more specific cases. In this paper, we will try to answer if it is possible that the M\"obius polynomial of a matroid, together with the M\"obius polynomial of the dual matroid, define the coboundary polynomial of the matroid. In some cases, the answer is affirmative, and we will give two constructions to determine the coboundary polynomial in these cases.Comment: 12 page

The RNA Helicase DDX6 Controls Cellular Plasticity by Modulating P-Body Homeostasis

Post-transcriptional mechanisms have the potential to influence complex changes in gene expression, yet their role in cell fate transitions remains largely unexplored. Here, we show that suppression of the RNA helicase DDX6 endows human and mouse primed embryonic stem cells (ESCs) with a differentiation-resistant, “hyper-pluripotent” state, which readily reprograms to a naive state resembling the preimplantation embryo. We further demonstrate that DDX6 plays a key role in adult progenitors where it controls the balance between self-renewal and differentiation in a context-dependent manner. Mechanistically, DDX6 mediates the translational suppression of target mRNAs in P-bodies. Upon loss of DDX6 activity, P-bodies dissolve and release mRNAs encoding fate-instructive transcription and chromatin factors that re-enter the ribosome pool. Increased translation of these targets impacts cell fate by rewiring the enhancer, heterochromatin, and DNA methylation landscapes of undifferentiated cell types. Collectively, our data establish a link between P-body homeostasis, chromatin organization, and stem cell potency