Segmentation Using Wavelet And GVF Snake.

The Gradient Vector Flow (GVF) snake is a popular technique to segment object in image processing. Its advantages arc insensitivity to contour initialization and its ability to deform into highly concave part of the object compared to other deformable contour models

Wavelet Energy Guided Level Set Based Active Contour - A Novel Method To Segment Highly Similar Intensity Regions

Segmentasi imej adalah salah satu peringkat permulaan yang paling penting dalam sistem pengesanan berbantukan komputer yang mempermudahkan pengesanan, pengecaman dan pengukuran objek selanjutnya. Image segmentation is one of the most important preliminary stages in computer-aided diagnosis system that facilitates further object identification, recognition, and quantification

Speckle reducing bilateral filter for cattle follicle segmentation

<p>Abstract</p> <p>Background</p> <p>Ultrasound imaging technology has wide applications in cattle reproduction and has been used to monitor individual follicles and determine the patterns of follicular development. However, the speckles in ultrasound images affect the post-processing, such as follicle segmentation and finally affect the measurement of the follicles. In order to reduce the effect of speckles, a bilateral filter is developed in this paper.</p> <p>Results</p> <p>We develop a new bilateral filter for speckle reduction in ultrasound images for follicle segmentation and measurement. Different from the previous bilateral filters, the proposed bilateral filter uses normalized difference in the computation of the Gaussian intensity difference. We also present the results of follicle segmentation after speckle reduction. Experimental results on both synthetic images and real ultrasound images demonstrate the effectiveness of the proposed filter.</p> <p>Conclusions</p> <p>Compared with the previous bilateral filters, the proposed bilateral filter can reduce speckles in both high-intensity regions and low intensity regions in ultrasound images. The segmentation of the follicles in the speckle reduced images by the proposed method has higher performance than the segmentation in the original ultrasound image, and the images filtered by Gaussian filter, the conventional bilateral filter respectively.</p

Multi-resolution Active Models for Image Segmentation

Image segmentation refers to the process of subdividing an image into a set of non-overlapping regions. Image segmentation is a critical and essential step to almost all higher level image processing and pattern recognition approaches, where a good segmentation relieves higher level applications from considering irrelevant and noise data in the image. Image segmentation is also considered as the most challenging image processing step due to several reasons including spatial discontinuity of the region of interest and the absence of a universally accepted criteria for image segmentation. Among the huge number of segmentation approaches, active contour models or simply snakes receive a great attention in the literature. Where the contour/boundary of the region of interest is defined as the set of pixels at which the active contour reaches its equilibrium state. In general, two forces control the movement of the snake inside the image, internal force that prevents the snake from stretching and bending and external force that pulls the snake towards the desired object boundaries. One main limitation of active contour models is their sensitivity to image noise. Specifically, noise sensitivity leads the active contour to fail to properly converge, getting caught on spurious image features, preventing the iterative solver from taking large steps towards the final contour. Additionally, active contour initialization forms another type of limitation. Where, especially in noisy images, the active contour needs to be initialized relatively close to the object of interest, otherwise the active contour will be pulled by other non-real/spurious image features. This dissertation, aiming to improve the active model-based segmentation, introduces two models for building up the external force of the active contour. The first model builds up a scale-based-weighted gradient map from all resolutions of the undecimated wavelet transform, with preference given to coarse gradients over fine gradients. The undecimated wavelet transform, due to its near shift-invariance and the absence of down-sampling properties, produces well-localized gradient maps at all resolutions of the transform. Hence, the proposed final weighted gradient map is able to better drive the snake towards its final equilibrium state. Unlike other multiscale active contour algorithms that define a snake at each level of the hierarchy, our model defines a single snake with the external force field is simultaneously built based on gradient maps from all scales. The second model proposes the incorporation of the directional information, revealed by the dual tree complex wavelet transform (DT CWT), into the external force field of the active contour. At each resolution of the transform, a steerable set of convolution kernels is created and used for external force generation. In the proposed model, the size and the orientation of the kernels depend on the scale of the DT CWT and the local orientation statistics of each pixel. Experimental results using nature, synthetic and Optical Coherent Tomography (OCT) images reflect the superiority of the proposed models over the classical and the state-of-the-art models

Image based real-time ice load prediction tool for ship and offshore platform in managed ice field

The increased activities in arctic water warrant modelling of ice properties and ice-structure interaction forces to ensure safe operations of ships and offshore platforms. Several established analytical and numerical ice force estimation models can be found in the literature. Recently, researchers have been working on Machine Learning (ML) based, data-driven force predictors trained on experimental data and field measurement. Application of both traditional and ML-based image processing for extracting information from ice floe images has also been reported in recent literature; because extraction of ice features from real-time videos and images can significantly improve ice force prediction. However, there exists room for improvement in those studies. For example, accurate extraction of ice floe information is still challenging because of their complex and varied shapes, colour similarities and reflection of light on them. Besides, real ice floes are often found in groups with overlapped and/or connected boundaries, making detecting even more challenging due to weaker edges in such situations. The development of an efficient coupled model, which will extract information from the ice floe images and train a force predictor based on the extracted dataset, is still an open problem. This research presents two Hybrid force prediction models. Instead of using analytical or numerical approaches, the Hybrid models directly extract floe characteristics from the images and later train ML-based force predictors using those extracted floe parameters. The first model extracted ice features from images using traditional image processing techniques and then used SVM and FFNN to develop two separate force predictors. The improved ice image processing technique used here can extract useful ice properties from a closely connected, unevenly illuminated floe field with various floe sizes and shapes. The second model extracted ice features from images using RCNN and then trained two separate force predictors using SVM and FFNN, similar to the first model. The dataset for training SVM and FFNN force predictors involved variables extracted from the image (floe number, density, sizes, etc.) and variables taken from the experimental analysis results (ship speed, floe thickness, force etc.). The performance of both Hybrid models in terms of image segmentation and force prediction, are analyzed and compared to establish their validity and applicability. Nevertheless, there exists room for further development of the proposed Hybrid models. For example, extend the current models to include more data and investigate other machine learning and deep learning-based network architectures to predict the ice force directly from the image as an input

Foetal echocardiographic segmentation

Congenital heart disease affects just under one percentage of all live births [1]. Those defects that manifest themselves as changes to the cardiac chamber volumes are the motivation for the research presented in this thesis. Blood volume measurements in vivo require delineation of the cardiac chambers and manual tracing of foetal cardiac chambers is very time consuming and operator dependent. This thesis presents a multi region based level set snake deformable model applied in both 2D and 3D which can automatically adapt to some extent towards ultrasound noise such as attenuation, speckle and partial occlusion artefacts. The algorithm presented is named Mumford Shah Sarti Collision Detection (MSSCD). The level set methods presented in this thesis have an optional shape prior term for constraining the segmentation by a template registered to the image in the presence of shadowing and heavy noise. When applied to real data in the absence of the template the MSSCD algorithm is initialised from seed primitives placed at the centre of each cardiac chamber. The voxel statistics inside the chamber is determined before evolution. The MSSCD stops at open boundaries between two chambers as the two approaching level set fronts meet. This has significance when determining volumes for all cardiac compartments since cardiac indices assume that each chamber is treated in isolation. Comparison of the segmentation results from the implemented snakes including a previous level set method in the foetal cardiac literature show that in both 2D and 3D on both real and synthetic data, the MSSCD formulation is better suited to these types of data. All the algorithms tested in this thesis are within 2mm error to manually traced segmentation of the foetal cardiac datasets. This corresponds to less than 10% of the length of a foetal heart. In addition to comparison with manual tracings all the amorphous deformable model segmentations in this thesis are validated using a physical phantom. The volume estimation of the phantom by the MSSCD segmentation is to within 13% of the physically determined volume

Texture analysis of multimodal magnetic resonance images in support of diagnostic classification of childhood brain tumours

Primary brain tumours are recognised as the most common form of solid tumours in children, with pilocytic astrocytoma, medulloblastoma and ependymoma being found most frequently. Despite their high mortality rate, early detection can be facilitated through the use of Magnetic Resonance Imaging (MRI), which is the preferred scanning technique for paediatric patients. MRI offers a variety of imaging sequences through structural and functional imaging, as well as providing complementary tissue information. However visual examination of MR images provides limited ability to characterise distinct histological types of brain tumours. In order to improve diagnostic classification, we explore the use of a computer-aided system based on texture analysis (TA) methods. TA has been applied on conventional MRI but has been less commonly studied on diffusion MRI of brain-related pathology. Furthermore, the combination of textural features derived from both imaging approaches has not yet been widely studied. In this thesis, the aim of the research is to investigate TA based on multi-centre multimodal MRI, in order to provide more comprehensive information and develop an automated processing framework for the classification of childhood brain tumours

Fully Automatic Ultrasound Fetal Heart Image Detection and Segmentation based on Texture Analysis

Ultrasound fetal heart image analysis is important for the antenatal diagnosis of congenital heart disease, therefore, design an automated fetal heart ultrasound image analysis approaches to improve detection ratio of congenital heart disease is necessary. Nevertheless, because of the complicated structure of fetal heart ultrasound image, location, detection and segmentation approaches of fetal heart images as interesting topics that get more attention. Therefore, in this work, we present a framework to segment ultrasound image automatically for tracking the boundary of fetal heart region. In the first step, this paper contributes to breed candidate regions. And then, in the segmentation progress, we apply an energy-based active contour model to detect the edges of fetal heart. Finally, in the experiment section, the performance is estimated by the Dice similarity coefficient, which calculate the spatial overlap between two different segmentation regions, and the experiment results indicate that the proposed algorithm achieves high levels of accuracy