The PISCES 2 parallel programming environment

PISCES 2 is a programming environment for scientific and engineering computations on MIMD parallel computers. It is currently implemented on a flexible FLEX/32 at NASA Langley, a 20 processor machine with both shared and local memories. The environment provides an extended Fortran for applications programming, a configuration environment for setting up a run on the parallel machine, and a run-time environment for monitoring and controlling program execution. This paper describes the overall design of the system and its implementation on the FLEX/32. Emphasis is placed on several novel aspects of the design: the use of a carefully defined virtual machine, programmer control of the mapping of virtual machine to actual hardware, forces for medium-granularity parallelism, and windows for parallel distribution of data. Some preliminary measurements of storage use are included

Transparent dynamic instrumentation

Process virtualization provides a virtual execution environment within which an unmodified application can be monitored and controlled while it executes. The provided layer of control can be used for purposes ranging from sandboxing to compatibility to profiling. The additional operations required for this layer are performed clandestinely alongside regular program execution. Software dynamic instrumentation is one method for implementing process virtualization which dynamically instruments an application such that the application's code and the inserted code are interleaved together. DynamoRIO is a process virtualization system implemented using software code cache techniques that allows users to build customized dynamic instrumentation tools. There are many challenges to building such a runtime system. One major obstacle is transparency. In order to support executing arbitrary applications, DynamoRIO must be fully transparent so that an application cannot distinguish between running inside the virtual environment and native execution. In addition, any desired extra operations for a particular tool must avoid interfering with the behavior of the application. Transparency has historically been provided on an ad-hoc basis, as a reaction to observed problems in target applications. This paper identifies a necessary set of transparency requirements for running mainstream Windows and Linux applications. We discuss possible solutions to each transparency issue, evaluate tradeoffs between different choices, and identify cases where maintaining transparency is not practically solvable. We believe this will provide a guideline for better design and implementation of transparent dynamic instrumentation, as well as other similar process virtualization systems using software code caches

CyberLiveApp: a secure sharing and migration approach for live virtual desktop applications in a cloud environment

In recent years we have witnessed the rapid advent of cloud computing, in which the remote software is delivered as a service and accessed by users using a thin client over the Internet. In particular, the traditional desktop application can execute in the remote virtual machines without re-architecture providing a personal desktop experience to users through remote display technologies. However, existing cloud desktop applications mainly achieve isolation environments using virtual machines (VMs), which cannot adequately support application-oriented collaborations between multiple users and VMs. In this paper, we propose a flexible collaboration approach, named CyberLiveApp, to enable live virtual desktop applications sharing based on a cloud and virtualization infrastructure. The CyberLiveApp supports secure application sharing and on-demand migration among multiple users or equipment. To support VM desktop sharing among multiple users, a secure access mechanism is developed to distinguish view privileges allowing window operation events to be tracked to compute hidden window areas in real time. A proxy-based window filtering mechanism is also proposed to deliver desktops to different users. To support application sharing and migration between VMs, we use the presentation streaming redirection mechanism and VM cloning service. These approaches have been preliminary evaluated on an extended MetaVNC. Results of evaluations have verified that these approaches are effective and useful

High-Performance Cloud Computing: A View of Scientific Applications

Scientific computing often requires the availability of a massive number of computers for performing large scale experiments. Traditionally, these needs have been addressed by using high-performance computing solutions and installed facilities such as clusters and super computers, which are difficult to setup, maintain, and operate. Cloud computing provides scientists with a completely new model of utilizing the computing infrastructure. Compute resources, storage resources, as well as applications, can be dynamically provisioned (and integrated within the existing infrastructure) on a pay per use basis. These resources can be released when they are no more needed. Such services are often offered within the context of a Service Level Agreement (SLA), which ensure the desired Quality of Service (QoS). Aneka, an enterprise Cloud computing solution, harnesses the power of compute resources by relying on private and public Clouds and delivers to users the desired QoS. Its flexible and service based infrastructure supports multiple programming paradigms that make Aneka address a variety of different scenarios: from finance applications to computational science. As examples of scientific computing in the Cloud, we present a preliminary case study on using Aneka for the classification of gene expression data and the execution of fMRI brain imaging workflow.Comment: 13 pages, 9 figures, conference pape

Grid-enabling FIRST: Speeding up simulation applications using WinGrid

The vision of grid computing is to make computational power, storage capacity, data and applications available to users as readily as electricity and other utilities. Grid infrastructures and applications have traditionally been geared towards dedicated, centralized, high performance clusters running on UNIX flavour operating systems (commonly referred to as cluster-based grid computing). This can be contrasted with desktop-based grid computing which refers to the aggregation of non-dedicated, de-centralized, commodity PCs connected through a network and running (mostly) the Microsoft Windowstrade operating system. Large scale adoption of such Windowstrade-based grid infrastructure may be facilitated via grid-enabling existing Windows applications. This paper presents the WinGridtrade approach to grid enabling existing Windowstrade based commercial-off-the-shelf (COTS) simulation packages (CSPs). Through the use of a case study developed in conjunction with Ford Motor Company, the paper demonstrates how experimentation with the CSP Witnesstrade and FIRST can achieve a linear speedup when WinGridtrade is used to harness idle PC computing resources. This, combined with the lessons learned from the case study, has encouraged us to develop the Web service extensions to WinGridtrade. It is hoped that this would facilitate wider acceptance of WinGridtrade among enterprises having stringent security policies in place

Using a desktop grid to support simulation modelling

Simulation is characterized by the need to run multiple sets of computationally intensive experiments. We argue that Grid computing can reduce the overall execution time of such experiments by tapping into the typically underutilized network of departmental desktop PCs, collectively known as desktop grids. Commercial-off-the-shelf simulation packages (CSPs) are used in industry to simulate models. To investigate if Grid computing can benefit simulation, this paper introduces our desktop grid, WinGrid, and discusses how this can be used to support the processing needs of CSPs. Results indicate a linear speed up and that Grid computing does indeed hold promise for simulation