Pattern based processing of XPath queries

As the popularity of areas including document storage and distributed systems continues to grow, the demand for high performance XML databases is increasingly evident. This has led to a number of research eorts aimed at exploiting the maturity of relational database systems in order to in- crease XML query performance. In our approach, we use an index structure based on a metamodel for XML databases combined with relational database technology to facilitate fast access to XML document elements. The query process involves transforming XPath expressions to SQL which can be executed over our optimised query engine. As there are many dierent types of XPath queries, varying processing logic may be applied to boost performance not only to indi- vidual XPath axes, but across multiple axes simultaneously. This paper describes a pattern based approach to XPath query processing, which permits the execution of a group of XPath location steps in parallel

Implementing a Portable Clinical NLP System with a Common Data Model - a Lisp Perspective

This paper presents a Lisp architecture for a portable NLP system, termed LAPNLP, for processing clinical notes. LAPNLP integrates multiple standard, customized and in-house developed NLP tools. Our system facilitates portability across different institutions and data systems by incorporating an enriched Common Data Model (CDM) to standardize necessary data elements. It utilizes UMLS to perform domain adaptation when integrating generic domain NLP tools. It also features stand-off annotations that are specified by positional reference to the original document. We built an interval tree based search engine to efficiently query and retrieve the stand-off annotations by specifying positional requirements. We also developed a utility to convert an inline annotation format to stand-off annotations to enable the reuse of clinical text datasets with inline annotations. We experimented with our system on several NLP facilitated tasks including computational phenotyping for lymphoma patients and semantic relation extraction for clinical notes. These experiments showcased the broader applicability and utility of LAPNLP.Comment: 6 pages, accepted by IEEE BIBM 2018 as regular pape

Information extraction

In this paper we present a new approach to extract relevant information by knowledge graphs from natural language text. We give a multiple level model based on knowledge graphs for describing template information, and investigate the concept of partial structural parsing. Moreover, we point out that expansion of concepts plays an important role in thinking, so we study the expansion of knowledge graphs to use context information for reasoning and merging of templates

Proceedings of QG2010: The Third Workshop on Question Generation

These are the peer-reviewed proceedings of "QG2010, The Third Workshop on Question Generation". The workshop included a special track for "QGSTEC2010: The First Question Generation Shared Task and Evaluation Challenge". QG2010 was held as part of The Tenth International Conference on Intelligent Tutoring Systems (ITS2010)

The study of probability model for compound similarity searching

Information Retrieval or IR system main task is to retrieve relevant documents according to the users query. One of IR most popular retrieval model is the Vector Space Model. This model assumes relevance based on similarity, which is defined as the distance between query and document in the concept space. All currently existing chemical compound database systems have adapt the vector space model to calculate the similarity of a database entry to a query compound. However, it assumes that fragments represented by the bits are independent of one another, which is not necessarily true. Hence, the possibility of applying another IR model is explored, which is the Probabilistic Model, for chemical compound searching. This model estimates the probabilities of a chemical structure to have the same bioactivity as a target compound. It is envisioned that by ranking chemical structures in decreasing order of their probability of relevance to the query structure, the effectiveness of a molecular similarity searching system can be increased. Both fragment dependencies and independencies assumption are taken into consideration in achieving improvement towards compound similarity searching system. After conducting a series of simulated similarity searching, it is concluded that PM approaches really did perform better than the existing similarity searching. It gave better result in all evaluation criteria to confirm this statement. In terms of which probability model performs better, the BD model shown improvement over the BIR model

A review of hypertext in a NASA project management context

The principles of data storage, the comparative strengths of data bases, and the evolution of hypertext within this context are discussed. A classification schema of indexing and of hypertext document structures is provided. Issues associated with hypertext implementation are also discussed and potential areas for further research are indicated

Energy efficient aircraft engines

The three engine programs that constitute the propulsion portion of NASA's Aircraft Energy Efficiency Program are described, their status indicated, and anticipated improvements in SFC discussed. The three engine programs are (1) Engine Component Improvement--directed at current engines, (2) Energy Efficiency Engine directed at new turbofan engines, and (3) Advanced Turboprops--directed at technology for advanced turboprop--powered aircraft with cruise speeds to Mach 0.8. Unique propulsion system interactive ties to the airframe resulting from engine design features to reduce fuel consumption are discussed. Emphasis is placed on the advanced turboprop since it offers the largest potential fuel savings of the three propulsion programs and also has the strongest interactive ties to the airframe

Pathfinder: XQuery - The Relational Way

Relational query processors are probably the best understood (as well as the best engineered) query engines available today. Although carefully tuned to process instances of the relational model (tables of tuples), these processors can also provide a foundation for the evaluation of "alien" (non-relational) query languages: if a relational encoding of the alien data model and its associated query language is given, the RDBMS may act like a special-purpose processor for the new language