An energy-based model to optimize cluster visualization

National audienceGraphs are mathematical structures that provide natural means for complex-data representation. Graphs capture the structure and thus help modeling a wide range of complex real-life data in various domains. Moreover graphs are especially suitable for information visualization. Indeed the intuitive visualabstraction (dots and lines) they provide is intimately associated with graphs. Visualization paves the way to interactive exploratory data-analysis and to important goals such as identifying groups and subgroups among data and helping to understand how these groups interact with each other. In this paper, we present a graph drawing approach that helps to better appreciate the cluster structure in data and the interactions that may exist between clusters. In this work, we assume that the clusters are already extracted and focus rather on the visualization aspects. We propose an energy-based model for graph drawing that produces an esthetic drawing that ensures each cluster will occupy a separate zone within thevisualization layout. This method emphasizes the inter-groups interactions and still shows the inter-nodes interactions. The drawing areas assigned to the clusters can be user-specified (prefixed areas) or automatically crafted (free areas). The approach we suggest also enables handling geographically-based clustering. In the case of free areas, we illustrate the use of our drawing method through an example. In the case of prefixed areas, we firstuse an example from citation networks and then use another exampleto compare the results of our method to those of the divide and conquer approach. In the latter case, we show that while the two methods successfully point out the cluster structure our method better visualize the global structure

Complexity results for three-dimensional orthogonal graph drawing

AbstractIn this paper we consider the problem of finding three-dimensional orthogonal drawings of maximum degree six graphs from the computational complexity perspective. We introduce a 3SAT reduction framework that can be used to prove the NP-hardness of finding three-dimensional orthogonal drawings with specific constraints. By using the framework we show that, given a three-dimensional orthogonal shape of a graph (a description of the sequence of axis-parallel segments of each edge), finding the coordinates for nodes and bends such that the drawing has no intersection is NP-complete. Conversely, we show that if node coordinates are fixed, finding a shape for the edges that is compatible with a non-intersecting drawing is a feasible problem, which becomes NP-complete if a maximum of two bends per edge is allowed. We comment on the impact of these results on the two open problems of determining whether a graph always admits a drawing with at most two bends per edge and of characterizing orthogonal shapes admitting an orthogonal drawing without intersections

Two Algorithms for Three Dimensional Orthogonal Graph Drawing

We use basic results from graph theory to design two algorithms for constructing 3-dimesional, intersection-free orthogonal grid drawings of n vertex graphs of maximum degree 6. Our first algorithm gives drawings bounded by an O(\sqrt(n)) \times O(\sqrt(n)) \times O(\sqrt(n)) box; each edge route containing at most 7 bends. The best previous result generated edge routes containing up to 16 bends per route. Our second algorithm gives drawings having at most 3 bends per edge route. The drawings lie in an O(n) \times O(n) \times O(n) bounding box. Together , the two algorithms initiate the study of bends/bounding box trade-off issues for 3-dimensional grid drawings