Discrete Imaging Models for Three-Dimensional Optoacoustic Tomography using Radially Symmetric Expansion Functions

Optoacoustic tomography (OAT), also known as photoacoustic tomography, is an emerging computed biomedical imaging modality that exploits optical contrast and ultrasonic detection principles. Iterative image reconstruction algorithms that are based on discrete imaging models are actively being developed for OAT due to their ability to improve image quality by incorporating accurate models of the imaging physics, instrument response, and measurement noise. In this work, we investigate the use of discrete imaging models based on Kaiser-Bessel window functions for iterative image reconstruction in OAT. A closed-form expression for the pressure produced by a Kaiser-Bessel function is calculated, which facilitates accurate computation of the system matrix. Computer-simulation and experimental studies are employed to demonstrate the potential advantages of Kaiser-Bessel function-based iterative image reconstruction in OAT

Distance-based skeletonization on the BCC grid

Strand proposed a distance-based thinning algorithm for computing surface skeletons on the body-centered cubic (BCC) grid. In this paper, we present two modified versions of this algorithm that are faster than the original one, and less sensitive to the visiting order of points in the sequential thinning phase. In addition, a novel algorithm capable of producing curve skeletons is also reported

Finite difference and finite volume methods for wave-based modelling of room acoustics

Wave-based models of sound propagation can be used to predict and synthesize sounds as they would be heard naturally in room acoustic environments. The numerical simulation of such models with traditional time-stepping grid-based methods can be an expensive process, due to the sheer size of listening environments (e.g., auditoriums and concert halls) and due to the temporal resolution required by audio rates that resolve frequencies up to the limit of human hearing. Finite difference methods comprise a simple starting point for such simulations, but they are known to suffer from approximation errors that may necessitate expensive grid refinements in order to achieve sufficient levels of accuracy. As such, a significant amount of research has gone into designing finite difference methods that are highly accurate while remaining computationally efficient. The problem of designing and using accurate finite difference schemes is compounded by the fact that room acoustics models require complex boundary conditions to model frequency-dependent wall impedances over non-trivial geometries. The implementation of such boundary conditions in a numerically stable manner has been a challenge for some time. Stable boundary conditions for finite difference room acoustics simulations have been formulated in the past, but generally they have only been useful in modelling trivial geometries (e.g., idealised shoebox halls). Finite volume methods have recently been shown to be a viable solution to the problem of complex boundary conditions over non-trivial geometries, and they also allow for the use of energy methods for numerical stability analyses. Finite volume methods lend themselves naturally to fully unstructured grids and they can simplify to the types of grids typically used in finite difference methods. This allows for room acoustics simulation models that balance the simplicity of finite difference methods for wave propagation in air with the detail of finite volume methods for the modelling of complex boundaries. This thesis is an exploration of these two distinct, yet related, approaches to wave-based room acoustic simulations. The overarching theme in this investigation is the balance between accuracy, computational efficiency, and numerical stability. Higher-order and optimised schemes in two and three spatial dimensions are derived and compared, towards the goal of finding accurate and efficient finite difference schemes. Numerical stability is analysed using frequency-domain analyses, as well as energy techniques whenever possible, allowing for stable and frequency-dependent boundary conditions appropriate for room acoustics modelling. Along the way, the use of non-Cartesian grids is investigated, geometric relationships between certain finite difference and finite volume schemes are explored, and some problems associated to staircasing effects at boundaries are considered. Also, models of sound absorption in air are incorporated into these numerical schemes, using physical parameters that are appropriate for room acoustic scenarios

A graph-based mathematical morphology reader

This survey paper aims at providing a "literary" anthology of mathematical morphology on graphs. It describes in the English language many ideas stemming from a large number of different papers, hence providing a unified view of an active and diverse field of research

Toward high-quality gradient estimation on regular lattices

Abstract—In this paper, we present two methods for accurate gradient estimation from scalar field data sampled on regular lattices. The first method is based on the multidimensional Taylor series expansion of the convolution sum and allows us to specify design criteria such as compactness and approximation power. The second method is based on a Hilbert space framework and provides a minimum error solution in the form of an orthogonal projection operating between two approximation spaces. Both methods lead to discrete filters, which can be combined with continuous reconstruction kernels to yield highly accurate estimators as compared to the current state of the art. We demonstrate the advantages of our methods in the context of volume rendering of data sampled on Cartesian and Body-Centered Cubic lattices. Our results show significant qualitative and quantitative improvements for both synthetic and real data, while incurring a moderate preprocessing and storage overhead. Index Terms—Approximation theory, Taylor series expansion, normal reconstruction, orthogonal projection, body-centered cubic lattice, box splines. Ç