Extending relativistic linear response theory to address solvent effects

The central aim of this thesis is to derive, implement and test new methods to calculate various types of spectroscopies of compounds containing heavy elements in an aqueous environment. Methods that can target such systems have to consider the following:(i) It is crucial to take relativistic effects into account.(ii) Modeling of larger systems is expensive in quantum chemistry. Thus, cheaper options need to be consideredfor the water solvent.(iii) Methods to calculate electronic spectra have to be able to model electronic excitations properly.(i) The relativistic effects can be obtained by solving the Dirac equation. This yields a four-component wave function, but methods based on only two-components have been developed in this thesis. (ii) Larger systems can be tackled by dividing them into a region that is treated by methods from electronic structure theory, and a larger environment that is treated classically as a collection of localized static multipole moments (charges, dipole moments, etc.). In most such hybrid schemes (called QM/MM) we only take into account how the static multipole moments in the environment influence the wave function in the QM region. In this thesis, however, we allow mutual polarization of the regions through the polarizable embedding (PE) model. (iii) We calculate excited state properties through linear response theory. This has been developed to work with a variety of approximate state wave functions and has been extended to a relativistic framework. Moreover, it has been combined with PE. Yet, regular linear response theory suffers from problems in non-resonant regions of spectra. For this, we consider a variant of linear response theory, called the complex polarization propagator. Here, the life-times of the excited states are included in the response equations. This allows the calculation of spectra in regions that are problematic in regular response theory. In this thesis, we have devised a method that combines relativistic CPP within a polarizable embedding framework. We employ the method on light-activated platinum complexes with application in chemotheraphy. Here, both relativistic and solvent effects are crucial to model the excitation processes. Moreover, we also consider the calculation of electronic circular dichroism for chiral organic molecules that contain heavy elements like iodine

Speed and accuracy: Having your cake and eating it too

Since the first ab initio methods were developed, the ultimate goal of quantum chemistry has been to provide insights, not readily accessible through experiment, into chemical phenomena. Over the years, two different paths to this end have been taken. The first path provides as accurate a description of relatively small systems as modern computer hardware will allow. The second path follows the desire to perform simulations on systems of physically relevant sizes while sacrificing a certain level of accuracy. The merging of these two paths has allowed for the accurate modeling of large molecular systems through the use of novel theoretical methods. The largest barrier to achieving the goal of accurate calculations on large systems has been the computational requirements of many modern theoretical methods. While these methods are capable of providing the desired level of accuracy, the prohibitive computational requirements can limit system sizes to tens of atoms. By decomposing large chemical systems into more computationally tractable pieces, fragmentation methods have the capability to reduce this barrier and allow for highly accurate descriptions of large molecular systems such as proteins, bulk phase solutions and polymers and nano-scale systems

Development and application of protein-based probes for correlated microscopy

Summarizing this thesis, the diversity is shown of protein labeling using nanobodies in different microscopic techniques. A new probe – FLIPPER-body – shows a efficient labeling in multiple microscopic techniques, in which multiple advantages are present compared to conventional antibodies. This small probe for correlated microscopy can become universal in use, because of the ease to adjust individual components towards researchers own wishes. Using this new method it was shown how extracellular vesicles can release their cargo to the cytoplasm. This proves that the new probe can contribute to the understanding of the building blocks in the human body

Development of nucleic acid-based nanoplatforms for applications in disease diagnostics and the study of nanomaterials-protein interactions

The impact of nucleic acids on scientific and medical progress has been enormous. DNA is the blueprint for structure and function from the level of individual cells up to whole organisms, and various forms of RNA are all involved in the regulation of genetic information. The identification of specific nucleic acid sequences and/or their level of expression provide key information for the molecular identity and organism functional state. This is very useful in areas like biomedicine. Nucleic acids are also versatile structural materials at the nanoscale. The precise recognition pattern of the Watson-Crick base pairs makes them not only successful as genetic materials, but also capable of directing the assembly of highly structured materials with unique nanoscale features. Nucleic acids, either alone or in combination with other materials, have been used to create a number of nanoscale structures and devices that perform actively in an engineered environment. In this thesis, research towards nucleic acids as a fundamental tool for both diagnostic purpose and structural applications is described. The thesis mainly consists of two studies. The first study is focused on nucleic acid-based biosensing using fluorescent quantum dots (QDs) as donors in a fluorescence resonance energy transfer (FRET) assay for addressing the analytical needs for DNA or RNA detection. The optimization of protocols for synthesizing QD-DNA constructs and their applications in biosensing assays are discussed. A highly sensitive and specific microRNA (miRNA) assay was then developed by the integration of the QD-DNA constructs and an isothermal enzyme-mediated target recycling step, with a detection limit of 42 fM and excellent selectivity for miR-148 versus base-mismatched sequences and other miRNAs. This proposed method was successfully employed for detection of miR-21 using an alternative FRET pair, which was compared to qRT-PCR for the quantitative analysis of miR-21 in biological samples. The second study is focused on construction and characterization of nucleic acid-based hierarchical porous nanostructures and presents a concept for exploiting such constructs as scaffolds for enzyme immobilization and activity studies. Based on rolling circle replication (RCR), DNA or RNA structures with flower-shaped morphologies were synthesized by interactions between inorganic magnesium pyrophosphate (Mg2PPi) crystals and DNA or RNA strands in a time-dependent manner. Focusing on RNA-based structures, various characterization techniques were applied to understand the composition and structure of the RNA particles, and different methods were taken for immobilizing protein or enzymes onto RNA particle. As a proof of principle study, β-galactosidase (β-gal) and horseradish peroxidase (HRP) enzymes were coupled to the RNA particles, and both exhibited enhanced enzymatic activity and improved stability in comparison to free enzymes. This RNA-based biomaterial provides a model to develop a wide range of biocatalysts and offers the promise of potent protein loading and delivery system for biomedical applications.Open Acces

Simulations of Chemical Catalysis

This dissertation contains simulations of chemical catalysis in both biological and heterogeneous contexts. A mixture of classical, quantum, and hybrid techniques are applied to explore the energy profiles and compare possible chemical mechanisms both within the context of human and bacterial enzymes, as well as exploring surface reactions on a metal catalyst. A brief summary of each project follows. Project 1 — Bacterial Enzyme SpvC The newly discovered SpvC effector protein from Salmonella typhimurium interferes with the host immune response by dephosphorylating mitogen-activated protein kinases (MAPKs) with a -elimination mechanism. The dynamics of the enzyme substrate complex of the SpvC effector is investigated with a 3.2 ns molecular dynamics simulation, which reveals that the phosphorylated peptide substrate is tightly held in the active site by a hydrogen bond network and the lysine general base is positioned for the abstraction of the alpha hydrogen. The catalysis is further modeled with density functional theory (DFT) in a truncated active-site model at the B3LYP/6-31 G(d,p) level of theory. The truncated model suggested the reaction proceeds via a single transition state. After including the enzyme environment in ab initio QM/MM studies, it was found to proceed via an E1cB-like pathway, in which the carbanion intermediate is stabilized by an enzyme oxyanion hole provided by Lys104 and Tyr158 of SpvC. Project 2 — Human Enzyme CDK2 Phosphorylation reactions catalyzed by kinases and phosphatases play an indispensable role in cellular signaling, and their malfunctioning is implicated in many diseases. Ab initio quantum mechanical/molecular mechanical studies are reported for the phosphoryl transfer reaction catalyzed by a cyclin-dependent kinase, CDK2. Our results suggest that an active-site Asp residue, rather than ATP as previously proposed, serves as the general base to activate the Ser nucleophile. The corresponding transition state features a dissociative, metaphosphate-like structure, stabilized by the Mg(II) ion and several hydrogen bonds. The calculated free-energy barrier is consistent with experimental values. Project 3 — Bacterial Enzyme Anthrax Lethal Factor In this dissertation, we report a hybrid quantum mechanical and molecular mechanical study of the catalysis of anthrax lethal factor, an important first step in designing inhibitors to help treat this powerful bacterial toxin. The calculations suggest that the zinc peptidase uses the same general base-general acid mechanism as in thermolysin and carboxypeptidase A, in which a zinc-bound water is activated by Glu687 to nucleophilically attack the scissile carbonyl carbon in the substrate. The catalysis is aided by an oxyanion hole formed by the zinc ion and the side chain of Tyr728, which provide stabilization for the fractionally charged carbonyl oxygen. Project 4 — Methanol Steam Reforming on PdZn alloy Recent experiments suggested that PdZn alloy on ZnO support is a very active and selective catalyst for methanol steam reforming (MSR). Plane-wave density functional theory calculations were carried out on the initial steps of MSR on both PdZn and ZnO surfaces. Our calculations indicate that the dissociation of both methanol and water is highly activated on \ufb02at surfaces of PdZn such as (111) and (100), while the dissociation barriers can be lowered significantly by surface defects, represented here by the (221), (110), and (321) faces of PdZn. The corresponding processes on the polar Zn-terminated ZnO(0001) surfaces are found to have low or null barriers. Implications of these results for both MSR and low temperature mechanisms are discussed

3D Bioprinting of multi-phasic osteochondral tissue substitutes: design criteria and biological functionality in vitro

Osteochondral defects comprise cartilage and bone tissue in the joint region and create challenges for orthopedic surgery, also because intrinsic regeneration capacities of the articular cartilage are limited. Furthermore, tissue layer-specific characteristics regarding cell types, mechanical properties and biochemical composition need to be considered. Research questions: In this work, concepts were developed which allow mimicking of osteochondral interfacial layers in a patient-individual and zonally specified manner by 3D extrusion (bio)printing. This feature of patient specificity was proven on different levels within this project: Besides the option for application of patient-own, expanded stem cells or chondrocytes within a scaffold to support regeneration and neo-tissue formation, a workflow was implemented which enables the consideration of magnetic resonance imaging (MRI) data and zonal geometry of the defect. With the materials suitable to achieve this design and a bioprinting-compatible process, the impact of such a system on embedded cells was investigated. A zonally structured, partly mineralized construct was evaluated regarding its capability to allow or support chondrogenesis of primary human chondrocytes (hChon). Furthermore, a strategy based on core-shell bioprinting technology was developed which allows simultaneous embedding of different cell types in a zonally defined distribution with a targeted effect by incorporated growth factors while reducing the off-target effects that would be expected when applied homogeneously via the surrounding medium. In addition, hybrid multi-material scaffolds were developed to adjust the stiffness of these systems. Materials and methods: To define design and patient-specific requirements for an osteochondral implant, an anonymized MRI dataset of a patient with osteochondritis dissecans (OCD) was used. The main constituent of the developed fabrication system was a bioink based on 3% alginate and 9% methylcellulose (algMC) with hChon. Laponite was added to alg-MC-based inks in order to control the release of differentiation factors for a sustained delivery in multi-zonal osteochondral constructs. A printable calcium phosphate cement (CPC) was used as a mineral phase. For the bioprinting process, multi-channel extrusion was applied for an alternating printing of hChon-laden algMC and CPC in order to mimic a zone of mineralized cartilage. Cell fate was investigated on biochemical and gene expression level. A coaxial extrusion module was applied for the co-extrusion of a bioink (shell) – algMC or plasma-functionalized algMC loaded with hChon or human pre-osteoblasts (hOB), respectively – and a biomaterial ink (core) doped with the corresponding growth factors TGF-β3 or BMP-2 as central target-specific factor depot. By melt electrowriting technology (MEW), additional scaffolds from polycaprolactone (PCL) microfibers with a freely adjustable fiber structure were generated. To trigger the mechanical stiffness of cell-laden hydrogels, these scaffolds were manually added to the bioprinting process as an extra support. Results: Suggested strategies of 3D extrusion (bio)printing for clinically relevant dimensions (Publication I)were successfully applied on algMC-based inks, bioinks and CPC to generate multi-material cell-laden constructs of an individual, patient-specific shape. With the use of flexible and reversible software solutions, MRI data from an OCD patient were utilized for the design and later fabrication of a bi-zonal implant (Publication II). The resulting implant showed a suitable geometry fitting into a model of the lesioned femoral condyles fabricated by stereolithography. For surgical fixation of such a potential implant, an individual implantation adapter was developed. The same materials processable via multi-channel printing were compatible with bioprinting of hChon isolated from the femoral head of human hip arthroplasty patients. The majority of cells survived the printing process and cultivation conditions in monophasic scaffolds consisting of cell-laden algMC, and in biphasic scaffolds with a zonally separated or interwoven mineral zone of calcium phosphate cement. Cells in both setups, representing plain articular cartilage and calcified cartilage, were able to re-differentiate and demonstrated the characteristic ECM marker production and gene expression. The calcium-deficient CPC led to a decrease of calcium ions and an initial increase of phosphate ions in the surrounding medium. In the presence of the CPC phase, chondrogenesis was enhanced (Publication III). The core-shell bioprinting concept allowed the spatially defined differentiation of cells (hChon or hOB), encapsulated in a bioink extruded as shell compartment, adjacent to a respective factor-loaded core depot with specific differentiation factors. The biomaterial inks for the core depot were successfully adjusted regarding viscosity and release kinetics by addition of nanoclay (Laponite) nanoparticles. Optical coherence tomography (OCT) was introduced as a tool to monitor the coaxial strand pattern and the location of embedded cells in a contactless manner. The applied inks allowed adjustment of release properties of components such as growth factors BMP-2 and TGF-β3. In hChon, characteristic genes such as collagen 2 or aggrecan were upregulated, while hOB were able to express the typical genes ALP, BGLAP and IBSP. Although both incorporated differentiation factors also demonstrated enhancing effects on both compartments, respectively, the induced adverse effects of hypertrophy in the cartilage zone and collagen 2 expression in the bone zone were successfully prevented. This was done by applying the factors with a sustained release via a Laponite-supported ink as the core depots, instead of homogeneously supplementing the surrounding cell culture medium (Publication IV). By adding PCL microfiber mesh scaffolds, fabricated by MEW, with a decreasing fiber density from 1000 to 250 µm, the Young’s modulus of the algMC scaffolds increased from 10 kPa to more than 50 kPa. The resulting hybrid scaffolds were proven cytocompatible; bioprinted hChon reacted to this hybrid algMC structure with a PCL density of 750 µm with an improved release of sulphated glycosaminoglycans (Publication V). Conclusions: A fully integrated approach for a multiphasic implant design, embedding of primary cells and simultaneous application of respective growth factors was realized by 3D extrusion (bio)printing. Concepts for bioprinting of mineralized cartilage based on algMC and CPC and for local factor delivery in osteochondral tissue substitutes by core-shell bioprinting were developed. The presented approaches allow an adjustable zonal design and full control over spatial differentiation and fate of bioprinted cells. The versatility of this modular system allows addition of further features as demonstrated for the combination with PCL microfiber scaffolds to adjust mechanical properties of the cartilage zone. Another option can be the mechanical stimulation of magnetically deformable algMC-magnetite scaffolds. These valuable insights for the field will serve as basis for further applications in vitro and in vivo. They might open up new research directions with a potential translation to other material combinations and other tissue defect types.:Table of Contents List of abbreviations List of figures Legal note 1. Introduction 1.1 The osteochondral interface – function, anatomy and histology 1.2 Pathology of cartilage and osteochondral tissue 1.3 State of the art: treatment of cartilage defects and osteochondral defects 1.4 Tissue engineering for osteochondral regeneration 1.5 Biomedical additive manufacturing and bioprinting 1.6 Hydrogels for bioprinting 1.7 Multi-component and multiphasic strategies to add specific cues and features to bioprinted tissue models 1.8 Additive Manufacturing of patient-specific bone and cartilage substitutes 2. Aims of the thesis List of publications included in the thesis 3. Strategies for biofabrication of volumetric constructs with an individual shape (Publication I) Publication I: Review article 4. Workflow for an MRI-guided, bi-zonal implant design (Publication II) 41 Publication II: Article Publication II: Published supporting information 5. Chondrogenesis in 3D bioprinted constructs and its compatibility with a mineral phase (Publication III) Publication III: Article Publication III: Published supporting information 6. Concept for a zonally defined factor delivery (Publication IV) Publication IV: Article Publication IV: Published supporting information 7. Hybrid bioscaffolds for tailoring mechanical properties of cartilage tissue substitutes (Publication V) Publication V: Article 8. Discussion and outlook References SUMMARY ZUSAMMENFASSUNG Acknowledgements List of other publications (co-)authored by the candidate Scientific congress contributions during PhD phase Journal ranking in Journal Citations Report Appendix I – Erklärungen zur Eröffnung des Promotionsverfahrens Appendix 2 – Erklärung zur Einhaltung gesetzlicher BestimmungenOsteochondrale Defekte umfassen Knochen- und Knorpelgewebe innerhalb des betroffenen Gelenks und stellen die klinische Orthopädie vor Herausforderungen dar, auch da die intrinsische Regenerationsfähigkeit des Gelenkknorpels stark limitiert ist. Zudem sind in den zu unterscheidenden Gewebeschichten spezifische Charakteristika wie unterschiedliche Zelltypen, mechanische Eigenschaften und die biochemische Zusammensetzung zu berücksichtigen. Fragestellungen: In der vorliegenden Arbeit wurden Konzepte entwickelt, mit dem sich per 3D-Extrusions(bio)druck Gewebeschichten dieser osteochondralen Grenzschicht zonenspezifisch und patientenindividuell nachbilden lassen. Diese patientenindividuellen Merkmale wurden innerhalb des Projektes auf mehreren Ebenen nachgewiesen: Zum einen können patienteneigene Stammzellen oder Chondrozyten nach Vermehrung im Labor innerhalb einer Gerüststruktur (“Scaffold”) zur Unterstützung der Regeneration und Gewebeneubildung angewandt werden. Zum anderen wurde ein Workflow vorgestellt, der die Berücksichtigung einer individuellen, per Magnetresonanztomographie (MRT) detektierten, schichtweisen Geometrie einer Läsion erlaubt. Mit Hilfe von Materialien, die diese Formgebung ermöglichen, wurde in einem Biodruck-kompatiblen Prozess der Einfluss eines solchen Systems auf eingebettete Zellen untersucht: Ein zonal aufgebautes, teilweise mineralisiertes Konstrukt wurde hinsichtlich dessen Eignung, Chondrogenese humaner Knorpelzellen (hChon) zu ermöglichen oder zu unterstützen, evaluiert. Zudem wurde eine auf der Kern-Mantel-Biodrucktechnologie basierende Strategie entwickelt, die das Einbetten unterschiedlicher Zelltypen mit zonal definierter Verteilung kombiniert mit einem gezielten Effekt durch inkorporierte Wachstumsfaktoren. Hierbei sollten unerwünschte Nebeneffekte der im Kern dargebrachten Faktoren auf die jeweils andere Zellsorte, die man bei homogener Faktorengabe über das umgebende Medium erwarten würde, reduziert werden. Weiterhin sollte mittels hybrider Multi-Material-Scaffolds die Steifigkeit des Systems angepasst werden. Material und Methoden: Um ein Design und patientenindividuelle Anforderungen für ein osteochondrales Implantat zu definieren, wurde ein anonymisierter MRT-Datensatz eines Osteochondrosis dissecans(OCD)-Patienten genutzt. Hauptbestandteil des entwickelten Fabrikationssystems war eine Biotinte aus 3% Alginat und 9% Methylcellulose (algMC) mit hChon. Laponit wurde zu den auf algMC basierenden Tinten hinzugefügt, um die Freisetzung von Differenzierungsfaktoren zu kontrollieren und damit eine verzögerte Gabe in mehrschichtigen osteochondralen Konstrukten zu ermöglichen. Ein druckbarer Kalziumphosphatzement (CPC) wurde als Mineralphase genutzt. Im Biodruckprozess wurde der Mehrkanaldruck angewandt, um durch alternierende Extrusion von hChon-beladenem algMC und CPC die mineralisierte Knorpelschicht nachzubilden. Die Zellentwicklung wurde auf biochemischer Ebene und hinsichtlich der exprimierten Gene untersucht. Ein koaxiales Extrusionsmodul wurde zur Ko-Extrusion einer Biotinte (Mantel), bestehend aus algMC beladen mit hChon oder Plasma-funktionalisierter algMC beladen mit humanen Prä-Osteoblasten (hOB), und einer korrespondierenden faktorenbeladenen Biomaterialtinte (Kern) genutzt. Dieses zielspezifische Faktorendepot enthielt jeweils TGF-β3 oder BMP-2. Durch die Technik des Melt Electrowritings (MEW) wurden zusätzliche Scaffolds aus Polycaprolacton(PCL)-Mikrofasern mit einer justierbaren Faserstruktur generiert. Um die Steifigkeit von zellbeladenen Hydrogelen anzupassen, wurden diese Scaffolds als mechanischer Support manuell während des Biodruckprozesses eingebracht. Ergebnisse: Die zugrundeliegenden Strategien des 3D-Extrusions(bio)drucks in klinisch relevanten Dimensionen (Publikation I) wurden an algMC-basierten Tinten, Biotinten und CPC erfolgreich angewandt, um zellbeladene Konstrukte patientenindividueller Form aus mehreren Materialien zu generieren. Durch den Einsatz flexibler und reversibler Software-Lösungen, wurden MRT-Daten eines Patienten mit einem osteochondralen Defekt verwendet, um ein zweischichtiges Implantatdesign zu entwerfen und zu fertigen (Publikation II). Dieses Implantat wies eine adäquate Passgenauigkeit in einem Modell der Läsion in den Femurkondylen, hergestellt per Stereolithografie, auf. Zur chirurgischen Fixierung eines solchen potenziellen Implantats wurde ein individueller Adapter für einen chirurgischen Stößel entwickelt. Das gleiche Materialsystem, prozessierbar mittels Mehrkanaldrucks, erwies sich als kompatibel zum Biodruck von hChon, isoliert aus dem Femurkopf von Hüft-Totalendoprothese-Patienten. Die meisten der Zellen überlebten den Druckprozess und die Kultivierungsbedingungen in monophasigen Scaffolds bestehend aus zellbeladener algMC-Biotinte, sowie in biphasigen Scaffolds mit einer in einer getrennten Schicht verlaufenden oder verwobenen mineralisierten Zone aus CPC. Zellen waren in beiden Ansätzen, als monophasiger oberflächlichen Gelenkknorpel, sowie als kalzifizierte Knorpelschicht, in der Lage, sich zu redifferenzieren; sie zeigten die Expression charakteristischer Matrix-Komponenten und -Gene. Der Kalzium-defizitäre CPC führte zu einer Verminderung der Kalziumionenkonzentration und zu einem initialen Anstieg der Phosphationen im umgebenden Medium. In Gegenwart der CPC-Phase war die Chondrogenese verstärkt (Publikation III). Das Konzept des Kern-Mantel-Biodrucks ermöglichte die örtlich aufgelöste Differenzierung von Zellen (hChon oder hOB), eingebettet in eine Biotinte extrudiert als Mantel-Kompartment, in unmittelbarer Nähe zu einem entsprechenden Faktor-beladenen Depot mit spezifischen Differenzierungsfaktoren. Die Biomaterialtinten für das Kern-Depot wurden durch die Zugabe von Nanoclay(Laponit)-Nanopartikeln hinsichtlich Viskosität und Freisetzungskinetik erfolgreich angepasst. Optische Kohärenztomographie (OCT) wurde als eine zerstörungsfreie Methode zur Beobachtung des koaxialen Strangmusters und der Zellverteilung eingeführt. Die genutzten Tinten erlaubten die Adaption der Freisetzungskurven unterschiedlicher Moleküle wie der Wachstumsfaktoren BMP-2 und TGF-β3. In hChon war die Expression charakteristischer Gene wie Kollagen 2 oder Aggrecan verstärkt, während hOB die für die osteogene Differenzierung typischen Markergene ALP, BGLAP und IBSP exprimierten. Obwohl beide inkorporierten Faktoren auch verstärkende Effekte auf jeweils beide Kompartimente zeigten, konnte der induzierte unerwünschte Effekt der Hypertrophie innerhalb der Knorpelzone sowie die unerwünschte Kollagen Typ 2-Expression innerhalb der Knochenzone erfolgreich verhindert werden. Dies geschah, indem die Faktoren statt homogen über das umgebende Zellkulturmedium mittels Laponit-Tinte und daher freisetzungsverzögernd über die Kern-Depots dargereicht wurden (Publikation IV). Mittels der PCL-Mikrofaser-Gitter-Scaffolds, hergestellt per MEW, mit enger werdenden Fasernetzdichten von 1000 bis 250 µm konnte der E-Modul der algMC-Scaffolds von 10 kPa auf über 50 kPa erhöht werden. Die Zytokompatibilität der hybriden Scaffolds wurden nachgewiesen; auf die Struktur in hybriden algMC-Scaffolds mit einer PCL-Faserdiche von 750 µm reagierten biogedruckte hChon mit einer erhöhten Freisetzung von sulfatierten Glykosaminoglykanen (Publikation V). Schlussfolgerungen: Ein integrierter Ansatz für ein mehrphasiges Implantatdesign, das Einbetten von primären Zellen und die gleichzeitige Anwendung der entsprechenden Wachstumsfaktoren wurde mittels 3D-Extrusions(bio)druck realisiert. Konzepte zum Biodruck von mineralisiertem Knorpel basierend auf algMC und CPC und zur lokalen Faktorengabe in osteochondralen Gewebeersatzstrukturen per Kern-Mantel-Druck wurden entwickelt. Die vorgestellten Ansätze erlauben ein vielseitig adaptierbares, zonales Design, die volle Kontrolle über die örtliche Differenzierung sowie die Reifung der biogedruckten Zellen. Die Vielseitigkeit des modularen Systems ermöglicht zudem das Hinzufügen weiterer Merkmale, was anhand des Einbringens von PCL-Mikrofaser-Scaffolds zur Justierung der mechanischen Eigenschaften der Knorpelzone demonstriert wurde. Eine weitere Option stellt die mechanische Stimulation magnetisch verformbarer algMC-Magnetit-Scaffolds dar. Die wertvollen Erkenntnisse werden als Basis für weitere Anwendungen in vitro sowie in vivo dienen können. All dies kann neue Möglichkeiten und Forschungsrichtungen eröffnen und ist in vielerlei Hinsicht übertragbar auf weitere Materialkombinationen, sowie verschiedene Defekt- und Gewebearten.:Table of Contents List of abbreviations List of figures Legal note 1. Introduction 1.1 The osteochondral interface – function, anatomy and histology 1.2 Pathology of cartilage and osteochondral tissue 1.3 State of the art: treatment of cartilage defects and osteochondral defects 1.4 Tissue engineering for osteochondral regeneration 1.5 Biomedical additive manufacturing and bioprinting 1.6 Hydrogels for bioprinting 1.7 Multi-component and multiphasic strategies to add specific cues and features to bioprinted tissue models 1.8 Additive Manufacturing of patient-specific bone and cartilage substitutes 2. Aims of the thesis List of publications included in the thesis 3. Strategies for biofabrication of volumetric constructs with an individual shape (Publication I) Publication I: Review article 4. Workflow for an MRI-guided, bi-zonal implant design (Publication II) 41 Publication II: Article Publication II: Published supporting information 5. Chondrogenesis in 3D bioprinted constructs and its compatibility with a mineral phase (Publication III) Publication III: Article Publication III: Published supporting information 6. Concept for a zonally defined factor delivery (Publication IV) Publication IV: Article Publication IV: Published supporting information 7. Hybrid bioscaffolds for tailoring mechanical properties of cartilage tissue substitutes (Publication V) Publication V: Article 8. Discussion and outlook References SUMMARY ZUSAMMENFASSUNG Acknowledgements List of other publications (co-)authored by the candidate Scientific congress contributions during PhD phase Journal ranking in Journal Citations Report Appendix I – Erklärungen zur Eröffnung des Promotionsverfahrens Appendix 2 – Erklärung zur Einhaltung gesetzlicher Bestimmunge