Animating jellyfish through numerical simulation and symmetry exploitation

This thesis presents an automatic animation system for jellyfish that is based on a physical simulation of the organism and its surrounding fluid. Our goal is to explore the unusual style of locomotion, namely jet propulsion, which is utilized by jellyfish. The organism achieves this propulsion by contracting its body, expelling water, and propelling itself forward. The organism then expands again to refill itself with water for a subsequent stroke. We endeavor to model the thrust achieved by the jellyfish, and also the evolution of the organism's geometric configuration. We restrict our discussion of locomotion to fully grown adult jellyfish, and we restrict our study of locomotion to the resonant gait, which is the organism's most active mode of locomotion, and is characterized by a regular contraction rate that is near one of the creature's resonant frequencies. We also consider only species that are axially symmetric, and thus are able to reduce the dimensionality of our model. We can approximate the full 3D geometry of a jellyfish by simulating a 2D slice of the organism. This model reduction yields plausible results at a lower computational cost. From the 2D simulation, we extrapolate to a full 3D model. To prevent our extrapolated model from being artificially smooth, we give the final shape more variation by adding noise to the 3D geometry. This noise is inspired by empirical data of real jellyfish, and also by work with continuous noise functions from the graphics community. Our 2D simulations are done numerically with ideas from the field of computational fluid dynamics. Specifically, we simulate the elastic volume of the jellyfish with a spring-mass system, and we simulate the surrounding fluid using the semi-Lagrangian method. To couple the particle-based elastic representation with the grid-based fluid representation, we use the immersed boundary method. We find this combination of methods to be a very efficient means of simulating the 2D slice with a minimal compromise in physical accuracy

Real-Time Ultrasound Simulation for Medical Training and Standardized Patient Assessment

With the increasing role played by ultrasound in clinical diagnostics, ultrasound training in medical education has become more and more important. The clinical routine for ultrasound training is on real patients; therefore monitored and guided examinations involving medical students are quite time-constrained. Furthermore, standardized patients (SPs), who are increasingly used in medical school for teaching and assessing medical students, need to be augmented. These SPs are typically healthy individuals who can not accurately portray the variety of abnormalities that are needed for training especially when medical examinations involve instrument interactions. To augment SPs in a realistically effective way and also address the resourced time constraints for sonography training, a computerized ultrasound simulation is essential for medical education. In this dissertation, I investigate a real-time ultrasound simulation methodology based on a virtual 3-dimentional (3-D) mesh organ. This research has developed the simulation technology to augment SPs with synthetic ultrasound images. I present this methodology and its use in simulating echocardiography. This simulated echocardiogram displays the various oriented sonographs in real time according to the placement of a mock transducer without the need of an actual patient

Book of Abstracts 15th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering and 3rd Conference on Imaging and Visualization

In this edition, the two events will run together as a single conference, highlighting the strong connection with the Taylor & Francis journals: Computer Methods in Biomechanics and Biomedical Engineering (John Middleton and Christopher Jacobs, Eds.) and Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization (JoãoManuel R.S. Tavares, Ed.). The conference has become a major international meeting on computational biomechanics, imaging andvisualization. In this edition, the main program includes 212 presentations. In addition, sixteen renowned researchers will give plenary keynotes, addressing current challenges in computational biomechanics and biomedical imaging. In Lisbon, for the first time, a session dedicated to award the winner of the Best Paper in CMBBE Journal will take place. We believe that CMBBE2018 will have a strong impact on the development of computational biomechanics and biomedical imaging and visualization, identifying emerging areas of research and promoting the collaboration and networking between participants. This impact is evidenced through the well-known research groups, commercial companies and scientific organizations, who continue to support and sponsor the CMBBE meeting series. In fact, the conference is enriched with five workshops on specific scientific topics and commercial software.info:eu-repo/semantics/draf

Advanced Applications of Rapid Prototyping Technology in Modern Engineering

Rapid prototyping (RP) technology has been widely known and appreciated due to its flexible and customized manufacturing capabilities. The widely studied RP techniques include stereolithography apparatus (SLA), selective laser sintering (SLS), three-dimensional printing (3DP), fused deposition modeling (FDM), 3D plotting, solid ground curing (SGC), multiphase jet solidification (MJS), laminated object manufacturing (LOM). Different techniques are associated with different materials and/or processing principles and thus are devoted to specific applications. RP technology has no longer been only for prototype building rather has been extended for real industrial manufacturing solutions. Today, the RP technology has contributed to almost all engineering areas that include mechanical, materials, industrial, aerospace, electrical and most recently biomedical engineering. This book aims to present the advanced development of RP technologies in various engineering areas as the solutions to the real world engineering problems

Proceedings, MSVSCC 2012

Proceedings of the 6th Annual Modeling, Simulation & Visualization Student Capstone Conference held on April 19, 2012 at VMASC in Suffolk, Virginia

Découpage virtuel interactif de corps élastiques pour simulation chirurgicale

''RÉSUMÉ : La simulation chirurgicale dans un environnement de réalité virtuelle fournit un moyen de pratiquer certaines opérations sans les risques associés à une intervention sur un patient ou le coût d’un mannequin. Afin de générer un sentiment de présence, on cherche à produire un environnement le plus complet possible, incluant une vision 3D, un retour haptique, des interactions crédibles et un comportement physique réaliste des objets présents. La recherche présentée ici porte sur la simulation physique du comportement d’organes mous, comme le foie ou le cerveau, ainsi que sur le découpage de ces organes à l’aide d’un scalpel, une interaction particulièrement difficile à reproduire virtuellement de façon réaliste. L’objectif principal est de développer une méthode de déformation à la fois réaliste et efficace, et de permettre à un utilisateur de découper interactivement un objet simulé par cette méthode, à l’aide d’un outil tranchant virtuel. De plus, nous voulons que la déformation et les interactions soient décrites avec une grande précision, tout en permettant d’effectuer les calculs très rapidement, pour une interaction fluide qui maintient le sentiment de présence.''----------''ABSTRACT : Surgery simulation in a virtual reality environment provides a way to practice certain operations without the risks associated with performing surgery on a patient or the cost of using arealistic dummy. To facilitate immersion, we seek to produce an environment as complete as possible, including 3D vision, haptic feedback, credible interactions and a realistic physical behavior of simulated objects. The research presented in this document focuses on the physical behavior of soft organs, like the brain or liver, and on cutting these organs using a scalpel. It is especially difficult to reproduce virtually that interaction in a realistic way. The main objective is to develop a deformation method that is both realistic and efficient, and to allow a user to interactively cut an object simulated through this method, using a virtual sharp tool. Furthermore, we want the deformation and interactions to be described with high precision while allowing for fast computations, for a smooth interaction that maintains immersion.'