Just-in-time Analytics Over Heterogeneous Data and Hardware

Industry and academia are continuously becoming more data-driven and data-intensive, relying on the analysis of a wide variety of datasets to gain insights. At the same time, data variety increases continuously across multiple axes. First, data comes in multiple formats, such as the binary tabular data of a DBMS, raw textual files, and domain-specific formats. Second, different datasets follow different data models, such as the relational and the hierarchical one. Data location also varies: Some datasets reside in a central "data lake", whereas others lie in remote data sources. In addition, users execute widely different analysis tasks over all these data types. Finally, the process of gathering and integrating diverse datasets introduces several inconsistencies and redundancies in the data, such as duplicate entries for the same real-world concept. In summary, heterogeneity significantly affects the way data analysis is performed. In this thesis, we aim for data virtualization: Abstracting data out of its original form and manipulating it regardless of the way it is stored or structured, without a performance penalty. To achieve data virtualization, we design and implement systems that i) mask heterogeneity through the use of heterogeneity-aware, high-level building blocks and ii) offer fast responses through on-demand adaptation techniques. Regarding the high-level building blocks, we use a query language and algebra to handle multiple collection types, such as relations and hierarchies, express transformations between these collection types, as well as express complex data cleaning tasks over them. In addition, we design a location-aware compiler and optimizer that masks away the complexity of accessing multiple remote data sources. Regarding on-demand adaptation, we present a design to produce a new system per query. The design uses customization mechanisms that trigger runtime code generation to mimic the system most appropriate to answer a query fast: Query operators are thus created based on the query workload and the underlying data models; the data access layer is created based on the underlying data formats. In addition, we exploit emerging hardware by customizing the system implementation based on the available heterogeneous processors â CPUs and GPGPUs. We thus pair each workload with its ideal processor type. The end result is a just-in-time database system that is specific to the query, data, workload, and hardware instance. This thesis redesigns the data management stack to natively cater for data heterogeneity and exploit hardware heterogeneity. Instead of centralizing all relevant datasets, converting them to a single representation, and loading them in a monolithic, static, suboptimal system, our design embraces heterogeneity. Overall, our design decouples the type of performed analysis from the original data layout; users can perform their analysis across data stores, data models, and data formats, but at the same time experience the performance offered by a custom system that has been built on demand to serve their specific use case

DAPHNE: An Open and Extensible System Infrastructure for Integrated Data Analysis Pipelines

Integrated data analysis (IDA) pipelines—that combine data management (DM) and query processing, high-performance computing (HPC), and machine learning (ML) training and scoring—become increasingly common in practice. Interestingly, systems of these areas share many compilation and runtime techniques, and the used—increasingly heterogeneous—hardware infrastructure converges as well. Yet, the programming paradigms, cluster resource management, data formats and representations, as well as execution strategies differ substantially. DAPHNE is an open and extensible system infrastructure for such IDA pipelines, including language abstractions, compilation and runtime techniques, multi-level scheduling, hardware (HW) accelerators, and computational storage for increasing productivity and eliminating unnecessary overheads. In this paper, we make a case for IDA pipelines, describe the overall DAPHNE system architecture, its key components, and the design of a vectorized execution engine for computational storage, HW accelerators, as well as local and distributed operations. Preliminary experiments that compare DAPHNE with MonetDB, Pandas, DuckDB, and TensorFlow show promising results

Building Efficient Query Engines in a High-Level Language

In this paper we advocate that it is time for a radical rethinking of database systems design. Developers should be able to leverage high-level programming languages without having to pay a price in efficiency. To realize our vision of abstraction without regret, we present LegoBase, a query engine written in the high-level programming language Scala. The key technique to regain efficiency is to apply generative programming: the Scala code that constitutes the query engine, despite its high-level appearance, is actually a program generator that emits specialized, low-level C code. We show how the combination of high-level and generative programming allows to easily implement a wide spectrum of optimizations that are difficult to achieve with existing low-level query compilers, and how it can continuously optimize the query engine. We evaluate our approach with the TPC-H benchmark and show that: (a) with all optimizations enabled, our architecture significantly outperforms a commercial in-memory database system as well as an existing query compiler, (b) these performance improvements require programming just a few hundred lines of high-level code instead of complicated low-level code that is required by existing query compilers and, finally, that (c) the compilation overhead is low compared to the overall execution time, thus making our approach usable in practice for efficiently compiling query engines

Efficient Incremental Data Analysis

Many data-intensive applications require real-time analytics over streaming data. In a growing number of domains -- sensor network monitoring, social web applications, clickstream analysis, high-frequency algorithmic trading, and fraud detections to name a few -- applications continuously monitor stream events to promptly react to certain data conditions. These applications demand responsive analytics even when faced with high volume and velocity of incoming changes, large numbers of users, and complex processing requirements. Developing suitable online analytics engine that meets these requirements is challenging. In this thesis, we study techniques for efficient online processing of complex analytical queries, ranging from standard database queries to complex machine learning and digital signal processing workflows. First, we focus on the problem of efficient incremental computation for database queries. We have developed a system, called DBToaster, that compiles declarative queries into high-performance stream processing engines that keep query results (views) fresh at very high update rates. At the heart of our system is a recursive query compilation algorithm that materializes a set of supporting higher-order delta views to achieve a substantially lower view maintenance cost. We study the trade-offs between single-tuple and batch incremental processing in local execution, and we present a novel approach for compiling view maintenance code into data-parallel programs optimized for distributed execution. DBToaster supports millions of complete view refreshes per second for a broad range of queries and outperforms commercial database and stream engines by orders of magnitude. We also study the incremental computation for queries written as iterative linear algebra, which can capture many machine learning and scientific calculations. We have developed a framework, called LINVIEW, for capturing deltas of linear algebra programs and understanding their computational cost. Linear algebra operations tend to cause an avalanche effect where even very local changes to the input matrices spread out and infect all of the intermediate results and the final view, causing incremental view maintenance to lose its performance benefit over re-evaluation. We develop techniques based on matrix factorizations to contain such epidemics of change and make incremental view maintenance of linear algebra practical and usually substantially cheaper than re-evaluation. We show, both analytically and experimentally, the usefulness of these techniques when applied to standard analytics tasks. Our last research question concerns the integration of general-purpose query processors and domain-specific operations to enable deep data exploration in both online and offline analysis. We advocate a deep integration of signal processing operations and general-purpose query processors. We demonstrate that in-situ processing of tempo-relational and signal data through a unified query language empowers users to express end-to-end workflows more succinctly inside one system while at the same time offering orders of magnitude better performance than existing popular data management systems

SciQL, A query language for science applications

Scientific applications are still poorly served by contemporary relational database systems. At best, the system provides a bridge towards an external library using user-defined functions, explicit import/export facilities or linked-in Java/C# interpreters. Time has come to rectify this with SciQL, a SQL-query language for science applications with arrays as first class citizens. It provides a seamless symbiosis of array-, set-, and sequence- interpretation using a clear separation of the mathematical object from its underlying storage representation. The language extends value-based grouping in SQL with structural grouping, i.e., fixed-sized and unbounded groups based on explicit relationships between its index attributes. It leads to a generalization of window-based query processing. The SciQL architecture benefits from a column store system with an adaptive storage scheme, including keeping multiple representations around for reduced impedance mismatch. This paper is focused on the language features, its architectural consequences and extensive examples of its intended use

Building Efficient Query Engines using High-Level Languages

We are currently witnessing a shift towards the use of high-level programming languages for systems development. These approaches collide with the traditional wisdom which calls for using low-level languages for building efficient software systems. This shift is necessary as billions of dollars are spent annually on the maintenance and debugging of performance-critical software. High-level languages promise faster development of higher-quality software; by offering advanced software features, they help to reduce the number of software errors of the systems and facilitate their verification. Despite these benefits, database systems development seems to be lagging behind as DBMSes are still written in low-level languages. The reason is that the increased productivity offered by high-level languages comes at the cost of a pronounced negative performance impact. In this thesis, we argue that it is now time for a radical rethinking of how database systems are designed. We show that, by using high-level languages, it is indeed possible to build databases that allow for both productivity and high performance. More concretely, in this thesis we follow this abstraction without regret vision and use high-level languages to address the following two problems of database development. First, the introduction of a new storage or memory technology typically requires the development of new versions of most out-of-core algorithms employed by the database system. Given the increasing popularity of hardware specialization, this leads to an arms race for the developers. To make things even worse, there exists no clear methodology for creating such algorithms and we must rely on significant creative effort to serve our need for out-of-core algorithms. To address this issue, we present the OCAS framework for the automatic synthesis of efficient out-of-core algorithms. The developer provides two independent inputs: 1) a memory-hierarchy-oblivious algorithm, expressed using a high-level specification language; and 2) a description of the target memory hierarchy. Using these specifications, our system is then able to automatically synthesize memory-hierarchy and storage-device-aware algorithms for tasks such as joins and sorting. The framework is extensible and quickly synthesizes custom out-of-core algorithms as new storage technologies become available. Second, from a software engineering point of view, years of performance-driven DBMS development have led to complicated, monolithic, low-level code bases, which are hard to maintain and extend. In particular, the introduction of new innovative approaches can be a very time-consuming task. To overcome such limitations, we present LegoBase, a query engine written in the high-level language, Scala. LegoBase realizes the abstraction without regret vision in the domain of analytical query processing. We show how by offering sufficiently powerful abstractions our system allows to easily implement a broad spectrum of optimizations which are difficult to achieve with existing approaches. Then, the key technique to regain efficiency is to apply generative programming and source-to-source compile the entire high-level Scala code to specialized, low-level C code. Our architecture significantly outperforms a commercial in-memory database system and an existing query compiler. LegoBase is the first step towards providing a full DBMS written in a high-level language

Program Analysis and Compilation Techniques for Speeding up Transactional Database Workloads

There is a trend towards increased specialization of data management software for performance reasons. The improved performance not only leads to a more efficient usage of the underlying hardware and cuts the operation costs of the system, but also is a game-changing competitive advantage for many emerging application domains such as high-frequency algorithmic trading, clickstream analysis, infrastructure monitoring, fraud detection, and online advertising to name a few. In this thesis, we study the automatic specialization and optimization of database application programs -- sequences of queries and updates, augmented with control flow constructs as they appear in database scripts, user-defined functions (UDFs), transactional workloads and triggers in languages such as PL/SQL. We propose to build online transaction processing (OLTP) systems around a modern compiler infrastructure. We show how to build an optimizing compiler for transaction programs using generative programming and state-of-the-art compiler technology, and present techniques for aggressive code inlining, fusion, deforestation, and data structure specialization in the domain of relational transaction programs. We also identify and explore the key optimizations that can be applied in this domain. In addition, we study the advantage of using program dependency analysis and restructuring to enable the concurrency control algorithms to achieve higher performance. Traditionally, optimistic concurrency control algorithms, such as optimistic Multi-Version Concurrency Control (MVCC), avoid blocking concurrent transactions at the cost of having a validation phase. Upon failure in the validation phase, the transaction is usually aborted and restarted from scratch. The "abort and restart" approach becomes a performance bottleneck for use cases with high contention objects or long running transactions. In addition, restarting from scratch creates a negative feedback loop in the system, because the system incurs additional overhead that may create even more conflicts. However, using the dependency information inside the transaction programs, we propose a novel transaction repair approach for in-memory databases. This low overhead approach summarizes the transaction programs in the form of a dependency graph. The dependency graph also contains the constructs used in the validation phase of the MVCC algorithm. Then, when encountering conflicts among transactions, our mechanism quickly detects the conflict locations in the program and partially re-executes the conflicting transactions. This approach maximizes the reuse of the computations done in the first execution round and increases the transaction processing throughput. We evaluate the proposed ideas and techniques in the thesis on some popular benchmarks such as TPC-C and modified versions of TPC-H and TPC-E, as well as other micro-benchmarks. We show that applying these techniques leads to 2x-100x performance improvement in many use cases. Besides, by selectively disabling some of the optimizations in the compiler, we derive a clinical and precise way of obtaining insight into their individual performance contributions

Energy-Aware Data Management on NUMA Architectures

The ever-increasing need for more computing and data processing power demands for a continuous and rapid growth of power-hungry data center capacities all over the world. As a first study in 2008 revealed, energy consumption of such data centers is becoming a critical problem, since their power consumption is about to double every 5 years. However, a recently (2016) released follow-up study points out that this threatening trend was dramatically throttled within the past years, due to the increased energy efficiency actions taken by data center operators. Furthermore, the authors of the study emphasize that making and keeping data centers energy-efficient is a continuous task, because more and more computing power is demanded from the same or an even lower energy budget, and that this threatening energy consumption trend will resume as soon as energy efficiency research efforts and its market adoption are reduced. An important class of applications running in data centers are data management systems, which are a fundamental component of nearly every application stack. While those systems were traditionally designed as disk-based databases that are optimized for keeping disk accesses as low a possible, modern state-of-the-art database systems are main memory-centric and store the entire data pool in the main memory, which replaces the disk as main bottleneck. To scale up such in-memory database systems, non-uniform memory access (NUMA) hardware architectures are employed that face a decreased bandwidth and an increased latency when accessing remote memory compared to the local memory. In this thesis, we investigate energy awareness aspects of large scale-up NUMA systems in the context of in-memory data management systems. To do so, we pick up the idea of a fine-grained data-oriented architecture and improve the concept in a way that it keeps pace with increased absolute performance numbers of a pure in-memory DBMS and scales up on NUMA systems in the large scale. To achieve this goal, we design and build ERIS, the first scale-up in-memory data management system that is designed from scratch to implement a data-oriented architecture. With the help of the ERIS platform, we explore our novel core concept for energy awareness, which is Energy Awareness by Adaptivity. The concept describes that software and especially database systems have to quickly respond to environmental changes (i.e., workload changes) by adapting themselves to enter a state of low energy consumption. We present the hierarchically organized Energy-Control Loop (ECL), which is a reactive control loop and provides two concrete implementations of our Energy Awareness by Adaptivity concept, namely the hardware-centric Resource Adaptivity and the software-centric Storage Adaptivity. Finally, we will give an exhaustive evaluation regarding the scalability of ERIS as well as our adaptivity facilities