Algorithms for group isomorphism via group extensions and cohomology

The isomorphism problem for finite groups of order n (GpI) has long been known to be solvable in $n^{\log n+O(1)}$ time, but only recently were polynomial-time algorithms designed for several interesting group classes. Inspired by recent progress, we revisit the strategy for GpI via the extension theory of groups. The extension theory describes how a normal subgroup N is related to G/N via G, and this naturally leads to a divide-and-conquer strategy that splits GpI into two subproblems: one regarding group actions on other groups, and one regarding group cohomology. When the normal subgroup N is abelian, this strategy is well-known. Our first contribution is to extend this strategy to handle the case when N is not necessarily abelian. This allows us to provide a unified explanation of all recent polynomial-time algorithms for special group classes. Guided by this strategy, to make further progress on GpI, we consider central-radical groups, proposed in Babai et al. (SODA 2011): the class of groups such that G mod its center has no abelian normal subgroups. This class is a natural extension of the group class considered by Babai et al. (ICALP 2012), namely those groups with no abelian normal subgroups. Following the above strategy, we solve GpI in $n^{O(\log \log n)}$ time for central-radical groups, and in polynomial time for several prominent subclasses of central-radical groups. We also solve GpI in $n^{O(\log\log n)}$ time for groups whose solvable normal subgroups are elementary abelian but not necessarily central. As far as we are aware, this is the first time there have been worst-case guarantees on a $n^{o(\log n)}$-time algorithm that tackles both aspects of GpI---actions and cohomology---simultaneously.Comment: 54 pages + 14-page appendix. Significantly improved presentation, with some new result

Medical Image Data and Datasets in the Era of Machine Learning-Whitepaper from the 2016 C-MIMI Meeting Dataset Session.

At the first annual Conference on Machine Intelligence in Medical Imaging (C-MIMI), held in September 2016, a conference session on medical image data and datasets for machine learning identified multiple issues. The common theme from attendees was that everyone participating in medical image evaluation with machine learning is data starved. There is an urgent need to find better ways to collect, annotate, and reuse medical imaging data. Unique domain issues with medical image datasets require further study, development, and dissemination of best practices and standards, and a coordinated effort among medical imaging domain experts, medical imaging informaticists, government and industry data scientists, and interested commercial, academic, and government entities. High-level attributes of reusable medical image datasets suitable to train, test, validate, verify, and regulate ML products should be better described. NIH and other government agencies should promote and, where applicable, enforce, access to medical image datasets. We should improve communication among medical imaging domain experts, medical imaging informaticists, academic clinical and basic science researchers, government and industry data scientists, and interested commercial entities

Direct Product Decompositions of Lattices, Closures and Relation Schemes

In this paper we study direct product decompositions of closure operations and lattices of closed sets. We characterize direct product decompositions of lattices of closed sets in terms of closure operations, and find those decompositions of lattices which correspond to the decompositions of closures. If a closure on a finite set is represented by its implication base (i.e. a binary relation on a powerset), we construct a polynomial algorithm to find its direct product decompositions. The main characterization theorem is also applied to define direct product decompositions of relational database schemes and to find out what properties of relational databases and schemes are preserved under decompositions

Discovery of the D-basis in binary tables based on hypergraph dualization

Discovery of (strong) association rules, or implications, is an important task in data management, and it nds application in arti cial intelligence, data mining and the semantic web. We introduce a novel approach for the discovery of a speci c set of implications, called the D-basis, that provides a representation for a reduced binary table, based on the structure of its Galois lattice. At the core of the method are the D-relation de ned in the lattice theory framework, and the hypergraph dualization algorithm that allows us to e ectively produce the set of transversals for a given Sperner hypergraph. The latter algorithm, rst developed by specialists from Rutgers Center for Operations Research, has already found numerous applications in solving optimization problems in data base theory, arti cial intelligence and game theory. One application of the method is for analysis of gene expression data related to a particular phenotypic variable, and some initial testing is done for the data provided by the University of Hawaii Cancer Cente

Logic Synthesis as an Efficient Means of Minimal Model Discovery from Multivariable Medical Datasets

In this paper we review the application of logic synthesis methods for uncovering minimal structures in observational/medical datasets. Traditionally used in digital circuit design, logic synthesis has taken major strides in the past few decades and forms the foundation of some of the most powerful concepts in computer science and data mining. Here we provide a review of current state of research in application of logic synthesis methods for data analysis and provide a demonstrative example for systematic application and reasoning based on these methods