Portable parallel kernels for high-speed beamforming in synthetic aperture ultrasound imaging

In medical ultrasound, synthetic aperture (SA) imaging is well-considered as a novel image formation technique for achieving superior resolution than that offered by existing scanners. However, its intensive processing load is known to be a challenging factor. To address such a computational demand, this paper proposes a new parallel approach based on the design of OpenCL signal processing kernels that can compute SA image formation in real-time. We demonstrate how these kernels can be ported onto different classes of parallel processors, namely multi-core CPUs and GPUs, whose multi-thread computing resources are able to process more than 250 fps. Moreover, they have strong potential to support the development of more complex algorithms, thus increasing the depth range of the inspected human volume and the final image resolution observed by the medical practitioner.published_or_final_versio

Front-end receiver for miniaturised ultrasound imaging

Point of care ultrasonography has been the focus of extensive research over the past few decades. Miniaturised, wireless systems have been envisaged for new application areas, such as capsule endoscopy, implantable ultrasound and wearable ultrasound. The hardware constraints of such small-scale systems are severe, and tradeoffs between power consumption, size, data bandwidth and cost must be carefully balanced. To address these challenges, two synthetic aperture receiver architectures are proposed and compared. The architectures target highly miniaturised, low cost, B-mode ultrasound imaging systems. The first architecture utilises quadrature (I/Q) sampling to minimise the signal bandwidth and computational load. Synthetic aperture beamforming is carried out using a single-channel, pipelined protocol in order to minimise system complexity and power consumption. A digital beamformer dynamically apodises and focuses the data by interpolating and applying complex phase rotations to the I/Q samples. The beamformer is implemented on a Spartan-6 FPGA and consumes 296mW for a frame rate of 7Hz. The second architecture employs compressive sensing within the finite rate of innovation (FRI) framework to further reduce the data bandwidth. Signals are sampled below the Nyquist frequency, and then transmitted to a digital back-end processor, which reconstructs I/Q components non-linearly, and then carries out synthetic aperture beamforming. Both architectures were tested in hardware using a single-channel analogue front-end (AFE) that was designed and fabricated in AMS 0.35μm CMOS. The AFE demodulates RF ultrasound signals sequentially into I/Q components, and comprises a low-noise preamplifier, mixer, programmable gain amplifier (PGA) and lowpass filter. A variable gain low noise preamplifier topology is used to enable quasi-exponential time-gain control (TGC). The PGA enables digital selection of three gain values (15dB, 22dB and 25.5dB). The bandwidth of the lowpass filter is also selectable between 1.85MHz, 510kHz and 195kHz to allow for testing of both architectural frameworks. The entire AFE consumes 7.8 mW and occupies an area of 1.5×1.5 mm. In addition to the AFE, this thesis also presents the design of a pseudodifferential, log-domain multiplier-filter or “multer” which demodulates low-RF signals in the current-domain. This circuit targets high impedance transducers such as capacitive micromachined ultrasound transducers (CMUTs) and offers a 20dB improvement in dynamic range over the voltage-mode AFE. The bandwidth is also electronically tunable. The circuit was implemented in 0.35μm BiCMOS and was simulated in Cadence; however, no fabrication results were obtained for this circuit. B-mode images were obtained for both architectures. The quadrature SAB method yields a higher image SNR and 9% lower root mean squared error with respect to the RF-beamformed reference image than the compressive SAB method. Thus, while both architectures achieve a significant reduction in sampling rate, system complexity and area, the quadrature SAB method achieves better image quality. Future work may involve the addition of multiple receiver channels and the development of an integrated system-on-chip.Open Acces

Parallelization and improvement of beamforming process in synthetic aperture systems for real-time ultrasonic image generation

Tesis inédita de la Universidad Complutense de Madrid, Facultad de Informática, Departamento de Arquitectura de Computadores y Automática, leída el 9-02-2016La ecografía es hoy en día uno de los métodos de visualización más populares para examinar el interior de cuerpos opacos. Su aplicación es especialmente significativa tanto en el campo del diagnóstico médico como en las aplicaciones de evaluación no destructiva en el ámbito industrial, donde se evalúa la integridad de un componente o una estructura. El desarrollo de sistemas ecográficos de alta calidad y con buenas prestaciones se basa en el empleo de sistemas multisensoriales conocidos como arrays que pueden estar compuestos por varias decenas de elementos. El desarrollo de estos dispositivos tiene asociada una elevada complejidad, tanto por el número de sensores y la electrónica necesaria para la adquisición paralela de señales, como por la etapa de procesamiento de los datos adquiridos que debe operar en tiempo real. Esta etapa de procesamiento de señal trabaja con un elevado flujo de datos en paralelo y desarrolla, además de la composición de imagen, otras sofisticadas técnicas de medidas sobre los datos (medida de elasticidad, flujo, etc). En este sentido, el desarrollo de nuevos sistemas de imagen con mayores prestaciones (resolución, rango dinámico, imagen 3D, etc) está fuertemente limitado por el número de canales en la apertura del array. Mientras algunos estudios se han centrado en la reducción activa de sensores (sparse arrays como ejemplo), otros se han centrado en analizar diferentes estrategias de adquisiciónn que, operando con un número reducido de canales electrónicos en paralelo, sean capaz por multiplexación emular el funcionamiento de una apertura plena. A estas últimas técnicas se las agrupa mediante el concepto de Técnicas de Apertura Sintética (SAFT). Su interés radica en que no solo son capaces de reducir los requerimientos hardware del sistema (bajo consumo, portabilidad, coste, etc) sino que además permiten dentro de cierto compromiso la mejora de la calidad de imagen respecto a los sistemas convencionales...Ultrasound is nowadays one of the most popular visualization methods to examine the interior of opaque objects. Its application is particularly significant in the field of medical diagnosis as well as non-destructive evaluation applications in industry. The development of high performance ultrasound imaging systems is based on the use of multisensory systems known as arrays, which may be composed by dozens of elements. The development of these devices has associated a high complexity, due to the number of sensors and electronics needed for the parallel acquisition of signals, and for the processing stage of the acquired data which must operate on real-time. This signal processing stage works with a high data flow in parallel and develops, besides the image composition, other sophisticated measure techniques (measure of elasticity, flow, etc). In this sense, the development of new imaging systems with higher performance (resolution, dynamic range, 3D imaging, etc) is strongly limited by the number of channels in array’s aperture. While some studies have been focused on the reduction of active sensors (i.e. sparse arrays), others have been centered on analysing different acquisition strategies which, operating with reduced number of electronic channels in parallel, are able to emulate by multiplexing the behavior of a full aperture. These latest techniques are grouped under the term known as Synthetic Aperture Techniques (SAFT). Their interest is that they are able to reduce hardware requirements (low power, portability, cost, etc) and also allow to improve the image quality over conventional systems...Depto. de Arquitectura de Computadores y AutomáticaFac. de InformáticaTRUEunpu

Cheetah: A Library for Parallel Ultrasound Beamforming in Multi -Core Systems

6 páginas, 2 figuras, 4 tablasDeveloping new imaging methods needs to establish some proofs of concept before implementing them on real -time scenarios. Nowadays, the high computational power reached by multi-core CPUs and GPUs have driven the development of software-based beamformers. Taking this into account, a library for the fast generation of ultrasound images is presented. It is based on Synthetic Aperture Imaging Techniques (SAFT) and it is fast because of the use of parallel computing techniques. Any kind of transducers as well as SAFT techniques can be defined although it includes some pre-built SAFT methods like 2R -SAFT and TFM. Furthermore, 2D and 3D imaging (slicebased or full volume computation) is supported along with the ability to generate both rectangular and angular images. For interpolation, linear and polynomial schemes can be chosen. The versatility of the library is ensured by interfacing it to Matlab, Python and any programming language over different operating systems. On a standard PC equipped with a single NVIDIA Quadro 4000 (256 cores), the library is able to calculate 262,144 pixels in ≈ 105 ms using a linear transducer with 64 elements, and 2,097,152 voxels in ≈ 5 seconds using a matrix transducer with 121 elements when TFM is applied.This work has been supported by the Spanish Government and the University of Alcalá under projects DPI2010- 19376 and CCG2014/EXP -084, respectively.Peer reviewe

Low Cost 3D Flow Estimation in Medical Ultrasound

abstract: Medical ultrasound imaging is widely used today because of it being non-invasive and cost-effective. Flow estimation helps in accurate diagnosis of vascular diseases and adds an important dimension to medical ultrasound imaging. Traditionally flow estimation is done using Doppler-based methods which only estimate velocity in the beam direction. Thus when blood vessels are close to being orthogonal to the beam direction, there are large errors in the estimation results. In this dissertation, a low cost blood flow estimation method that does not have the angle dependency of Doppler-based methods, is presented. First, a velocity estimator based on speckle tracking and synthetic lateral phase is proposed for clutter-free blood flow. Speckle tracking is based on kernel matching and does not have any angle dependency. While velocity estimation in axial dimension is accurate, lateral velocity estimation is challenging due to reduced resolution and lack of phase information. This work presents a two tiered method which estimates the pixel level movement using sum-of-absolute difference, and then estimates the sub-pixel level using synthetic phase information in the lateral dimension. Such a method achieves highly accurate velocity estimation with reduced complexity compared to a cross correlation based method. The average bias of the proposed estimation method is less than 2% for plug flow and less than 7% for parabolic flow. Blood is always accompanied by clutter which originates from vessel wall and surrounding tissues. As magnitude of the blood signal is usually 40-60 dB lower than magnitude of the clutter signal, clutter filtering is necessary before blood flow estimation. Clutter filters utilize the high magnitude and low frequency features of clutter signal to effectively remove them from the compound (blood + clutter) signal. Instead of low complexity FIR filter or high complexity SVD-based filters, here a power/subspace iteration based method is proposed for clutter filtering. Excellent clutter filtering performance is achieved for both slow and fast moving clutters with lower complexity compared to SVD-based filters. For instance, use of the proposed method results in the bias being less than 8% and standard deviation being less than 12% for fast moving clutter when the beam-to-flow-angle is $90^o$. Third, a flow rate estimation method based on kernel power weighting is proposed. As the velocity estimator is a kernel-based method, the estimation accuracy degrades near the vessel boundary. In order to account for kernels that are not fully inside the vessel, fractional weights are given to these kernels based on their signal power. The proposed method achieves excellent flow rate estimation results with less than 8% bias for both slow and fast moving clutters. The performance of the velocity estimator is also evaluated for challenging models. A 2D version of our two-tiered method is able to accurately estimate velocity vectors in a spinning disk as well as in a carotid bifurcation model, both of which are part of the synthetic aperture vector flow imaging (SA-VFI) challenge of 2018. In fact, the proposed method ranked 3rd in the challenge for testing dataset with carotid bifurcation. The flow estimation method is also evaluated for blood flow in vessels with stenosis. Simulation results show that the proposed method is able to estimate the flow rate with less than 9% bias.Dissertation/ThesisDoctoral Dissertation Electrical Engineering 201

Ultrasound Open Platforms for Next-Generation Imaging Technique Development

Open platform (OP) ultrasound systems are aimed primarily at the research community. They have been at the forefront of the development of synthetic aperture, plane wave, shear wave elastography, and vector flow imaging. Such platforms are driven by a need for broad flexibility of parameters that are normally preset or fixed within clinical scanners. OP ultrasound scanners are defined to have three key features including customization of the transmit waveform, access to the prebeamformed receive data, and the ability to implement real-time imaging. In this paper, a formative discussion is given on the development of OPs from both the research community and the commercial sector. Both software- and hardware-based architectures are considered, and their specifications are compared in terms of resources and programmability. Software-based platforms capable of real-time beamforming generally make use of scalable graphics processing unit architectures, whereas a common feature of hardware-based platforms is the use of field-programmable gate array and digital signal processor devices to provide additional on-board processing capacity. OPs with extended number of channels (>256) are also discussed in relation to their role in supporting 3-D imaging technique development. With the increasing maturity of OP ultrasound scanners, the pace of advancement in ultrasound imaging algorithms is poised to be accelerated

Ultrafast Ultrasound Imaging

Among medical imaging modalities, such as computed tomography (CT) and magnetic resonance imaging (MRI), ultrasound imaging stands out due to its temporal resolution. Owing to the nature of medical ultrasound imaging, it has been used for not only observation of the morphology of living organs but also functional imaging, such as blood flow imaging and evaluation of the cardiac function. Ultrafast ultrasound imaging, which has recently become widely available, significantly increases the opportunities for medical functional imaging. Ultrafast ultrasound imaging typically enables imaging frame-rates of up to ten thousand frames per second (fps). Due to the extremely high temporal resolution, this enables visualization of rapid dynamic responses of biological tissues, which cannot be observed and analyzed by conventional ultrasound imaging. This Special Issue includes various studies of improvements to the performance of ultrafast ultrasoun

Advancements and Breakthroughs in Ultrasound Imaging

Ultrasonic imaging is a powerful diagnostic tool available to medical practitioners, engineers and researchers today. Due to the relative safety, and the non-invasive nature, ultrasonic imaging has become one of the most rapidly advancing technologies. These rapid advances are directly related to the parallel advancements in electronics, computing, and transducer technology together with sophisticated signal processing techniques. This book focuses on state of the art developments in ultrasonic imaging applications and underlying technologies presented by leading practitioners and researchers from many parts of the world