Plant species recognition using spatial correlation between the leaf margin and the leaf salient points.

International audienceIn this paper, we propose an automatic approach for plant species identification, based on the visual information provided by the plant leaves. More precisely, we consider two sources of information: the leaf margin and the leaf salient points. We investigate two shape context based descriptors: the first one describes the leaf boundary while the second descriptor represents the spatial correlation between salient points of the leaf and its margin. We also study the performance of the fusion of these two descriptors on the ImageCLEF 2011 and 2012 leaf datasets. Experiments show the effectiveness and the efficiency of the proposed method

Study of Various Techniques for Medicinal Plant Identification

Ayurveda, the Indian ancient medicinal system, has gained importance because of its effectiveness in treating diseases. Medicinal plants are used in Ayurvedic medicines since ancient times. It is necessary to classify these plants so that it would be easy to select the right plant for the medicinal preparation or to study more about its characteristics. Identification is the pre-condition of classification of medicinal plant. In this paper, we have reviewed Image processing Near-Infrared Spectroscopy (NIRS), taxonomic key repository, neural network and DeoxyriboNucleic Acid (DNA) barcoding. The study shows that image processing is leading domain in identification of medicinal plant. The results are improved when multiple methods are used together in a sequence to identify a medicinal plant. Apart from that none of these methods are using geographical information to identify medicinal plants and we can use geographical Information System (GIS) information to improve its accuracy further

Advanced shape context for plant species identification using leaf image retrieval

International audienceThis paper presents a novel method for leaf species identification combining local and shape-based features. Our approach extends the shape context model in two ways. First of all, two different sets of points are distinguished when computing the shape contexts: the voting set, i.e. the points used to describe the coarse arrangement of the shape and the computing set containing the points where the shape contexts are computed. This representation is enriched by introducing local features computed in the neighborhood of the computing points. Experiments show the effectiveness of our approach

Combining Leaf Salient Points and Leaf Contour Descriptions for Plant Species Recognition

International audienceManual Plant identification done by experts is tedious and time consuming. This process needs to be automatic and easy to handle by the different stakeholders. In this paper, we propose an original method for plant species recognition, based on the leaf observation. We consider two sources of information: the leaf margin and the leaf salient points. For the leaf shape description, we investigate the shape context descriptor and two multiscale triangular approaches: the well-known triangle area representation (TAR) and the triangle side length representation (TSL). We propose then their combination with a shape-context based descriptor that represents the spatial correlation between the leaf salient points and the leaf margin. Experiments are carried out on three public leaf datasets. Results show that our approach achieves a high retrieval accuracy and outperforms state-of-art methods

Computer Vision Problems in 3D Plant Phenotyping

In recent years, there has been significant progress in Computer Vision based plant phenotyping (quantitative analysis of biological properties of plants) technologies. Traditional methods of plant phenotyping are destructive, manual and error prone. Due to non-invasiveness and non-contact properties as well as increased accuracy, imaging techniques are becoming state-of-the-art in plant phenotyping. Among several parameters of plant phenotyping, growth analysis is very important for biological inference. Automating the growth analysis can result in accelerating the throughput in crop production. This thesis contributes to the automation of plant growth analysis. First, we present a novel system for automated and non-invasive/non-contact plant growth measurement. We exploit the recent advancements of sophisticated robotic technologies and near infrared laser scanners to build a 3D imaging system and use state-of-the-art Computer Vision algorithms to fully automate growth measurement. We have set up a gantry robot system having 7 degrees of freedom hanging from the roof of a growth chamber. The payload is a range scanner, which can measure dense depth maps (raw 3D coordinate points in mm) on the surface of an object (the plant). The scanner can be moved around the plant to scan from different viewpoints by programming the robot with a specific trajectory. The sequence of overlapping images can be aligned to obtain a full 3D structure of the plant in raw point cloud format, which can be triangulated to obtain a smooth surface (triangular mesh), enclosing the original plant. We show the capability of the system to capture the well known diurnal pattern of plant growth computed from the surface area and volume of the plant meshes for a number of plant species. Second, we propose a technique to detect branch junctions in plant point cloud data. We demonstrate that using these junctions as feature points, the correspondence estimation can be formulated as a subgraph matching problem, and better matching results than state-of-the-art can be achieved. Also, this idea removes the requirement of a priori knowledge about rotational angles between adjacent scanning viewpoints imposed by the original registration algorithm for complex plant data. Before, this angle information had to be approximately known. Third, we present an algorithm to classify partially occluded leaves by their contours. In general, partial contour matching is a NP-hard problem. We propose a suboptimal matching solution and show that our method outperforms state-of-the-art on 3 public leaf datasets. We anticipate using this algorithm to track growing segmented leaves in our plant range data, even when a leaf becomes partially occluded by other plant matter over time. Finally, we perform some experiments to demonstrate the capability and limitations of the system and highlight the future research directions for Computer Vision based plant phenotyping

Computer Vision Problems in 3D Plant Phenotyping

In recent years, there has been significant progress in Computer Vision based plant phenotyping (quantitative analysis of biological properties of plants) technologies. Traditional methods of plant phenotyping are destructive, manual and error prone. Due to non-invasiveness and non-contact properties as well as increased accuracy, imaging techniques are becoming state-of-the-art in plant phenotyping. Among several parameters of plant phenotyping, growth analysis is very important for biological inference. Automating the growth analysis can result in accelerating the throughput in crop production. This thesis contributes to the automation of plant growth analysis. First, we present a novel system for automated and non-invasive/non-contact plant growth measurement. We exploit the recent advancements of sophisticated robotic technologies and near infrared laser scanners to build a 3D imaging system and use state-of-the-art Computer Vision algorithms to fully automate growth measurement. We have set up a gantry robot system having 7 degrees of freedom hanging from the roof of a growth chamber. The payload is a range scanner, which can measure dense depth maps (raw 3D coordinate points in mm) on the surface of an object (the plant). The scanner can be moved around the plant to scan from different viewpoints by programming the robot with a specific trajectory. The sequence of overlapping images can be aligned to obtain a full 3D structure of the plant in raw point cloud format, which can be triangulated to obtain a smooth surface (triangular mesh), enclosing the original plant. We show the capability of the system to capture the well known diurnal pattern of plant growth computed from the surface area and volume of the plant meshes for a number of plant species. Second, we propose a technique to detect branch junctions in plant point cloud data. We demonstrate that using these junctions as feature points, the correspondence estimation can be formulated as a subgraph matching problem, and better matching results than state-of-the-art can be achieved. Also, this idea removes the requirement of a priori knowledge about rotational angles between adjacent scanning viewpoints imposed by the original registration algorithm for complex plant data. Before, this angle information had to be approximately known. Third, we present an algorithm to classify partially occluded leaves by their contours. In general, partial contour matching is a NP-hard problem. We propose a suboptimal matching solution and show that our method outperforms state-of-the-art on 3 public leaf datasets. We anticipate using this algorithm to track growing segmented leaves in our plant range data, even when a leaf becomes partially occluded by other plant matter over time. Finally, we perform some experiments to demonstrate the capability and limitations of the system and highlight the future research directions for Computer Vision based plant phenotyping

Advances in Image Processing, Analysis and Recognition Technology

For many decades, researchers have been trying to make computers’ analysis of images as effective as the system of human vision is. For this purpose, many algorithms and systems have previously been created. The whole process covers various stages, including image processing, representation and recognition. The results of this work can be applied to many computer-assisted areas of everyday life. They improve particular activities and provide handy tools, which are sometimes only for entertainment, but quite often, they significantly increase our safety. In fact, the practical implementation of image processing algorithms is particularly wide. Moreover, the rapid growth of computational complexity and computer efficiency has allowed for the development of more sophisticated and effective algorithms and tools. Although significant progress has been made so far, many issues still remain, resulting in the need for the development of novel approaches