Staircase Join: Teach a Relational DBMS to Watch its (Axis) Steps

Relational query processors derive much of their effectiveness from the awareness of specific table properties like sort order, size, or absence of duplicate tuples. This text applies (and adapts) this successful principle to database-supported XML and XPath processing: the relational system is made tree aware, i.e., tree properties like subtree size, intersection of paths, inclusion or disjointness of subtrees are made explicit. We propose a local change to the database kernel, the staircase join, which encapsulates the necessary tree knowledge needed to improve XPath performance. Staircase join operates on an XML encoding which makes this knowledge available at the cost of simple integer operations (e.g., +, <=). We finally report on quite promising experiments with a staircase join enhanced main-memory database kernel

Reasoning & Querying – State of the Art

Various query languages for Web and Semantic Web data, both for practical use and as an area of research in the scientific community, have emerged in recent years. At the same time, the broad adoption of the internet where keyword search is used in many applications, e.g. search engines, has familiarized casual users with using keyword queries to retrieve information on the internet. Unlike this easy-to-use querying, traditional query languages require knowledge of the language itself as well as of the data to be queried. Keyword-based query languages for XML and RDF bridge the gap between the two, aiming at enabling simple querying of semi-structured data, which is relevant e.g. in the context of the emerging Semantic Web. This article presents an overview of the field of keyword querying for XML and RDF

On Incomplete XML Documents with Integrity Constraints

Abstract. We consider incomplete specifications of XML documents in the presence of schema information and integrity constraints. We show that integrity constraints such as keys and foreign keys affect consistency of such specifications. We prove that the consistency problem for incomplete specifications with keys and foreign keys can always be solved in NP. We then show a dichotomy result, classifying the complexity of the problem as NP-complete or PTIME, depending on the precise set of features used in incomplete descriptions.

An Injection with Tree Awareness: Adding Staircase Join to PostgreSQL

The syntactic wellformedness constraints of XML (opening and closing tags nest properly) imply that XML processors face the challenge to efficiently handle data that takes the shape of ordered, unranked trees. Although RDBMSs have originally been designed to manage table-shaped data, we propose their use as XML and XPath processors. In our setup, the database system employs a relational XML document encoding, the XPath accelerator [1], which maps information about the XML node hierarchy to a table, thus making it possible to evaluate XPath expressions on SQL hosts.\ud \ud Conventional RDBMSs, nevertheless, remain ignorant of many interesting properties of the encoded tree data, and were thus found to make no or poor use of these properties. This is why we devised a new join algorithm, staircase join [2], which incorporates the tree-specific knowledge required for an efficient SQL-based evaluation of XPath expressions. In a sense, this demonstration delivers the promise we have made at VLDB 2003 [2]: a notion of tree awareness can be injected into a conventional disk-based RDBMS kernel in terms of staircase join. The demonstration features a side-by-side comparison of both, an original and a staircase-join enhanced instance of PostgreSQL [4]. The required changes to\ud PostgreSQL were local, the achieved eect, however, is significant: the demonstration proves that this injection of tree awareness turns PostgreSQL into a high-performance XML processor that closely adheres to the XPath semantics

Visual exploration and retrieval of XML document collections with the generic system X2

This article reports on the XML retrieval system X2 which has been developed at the University of Munich over the last five years. In a typical session with X2, the user first browses a structural summary of the XML database in order to select interesting elements and keywords occurring in documents. Using this intermediate result, queries combining structure and textual references are composed semiautomatically. After query evaluation, the full set of answers is presented in a visual and structured way. X2 largely exploits the structure found in documents, queries and answers to enable new interactive visualization and exploration techniques that support mixed IR and database-oriented querying, thus bridging the gap between these three views on the data to be retrieved. Another salient characteristic of X2 which distinguishes it from other visual query systems for XML is that it supports various degrees of detailedness in the presentation of answers, as well as techniques for dynamically reordering and grouping retrieved elements once the complete answer set has been computed

On Region Algebras, XML Databases, and Information Retrieval

This paper describes some new ideas on developing a logical algebra for databases that manage textual data and support information retrieval functionality. We describe a first prototype of such a system

The study of probability model for compound similarity searching

Information Retrieval or IR system main task is to retrieve relevant documents according to the users query. One of IR most popular retrieval model is the Vector Space Model. This model assumes relevance based on similarity, which is defined as the distance between query and document in the concept space. All currently existing chemical compound database systems have adapt the vector space model to calculate the similarity of a database entry to a query compound. However, it assumes that fragments represented by the bits are independent of one another, which is not necessarily true. Hence, the possibility of applying another IR model is explored, which is the Probabilistic Model, for chemical compound searching. This model estimates the probabilities of a chemical structure to have the same bioactivity as a target compound. It is envisioned that by ranking chemical structures in decreasing order of their probability of relevance to the query structure, the effectiveness of a molecular similarity searching system can be increased. Both fragment dependencies and independencies assumption are taken into consideration in achieving improvement towards compound similarity searching system. After conducting a series of simulated similarity searching, it is concluded that PM approaches really did perform better than the existing similarity searching. It gave better result in all evaluation criteria to confirm this statement. In terms of which probability model performs better, the BD model shown improvement over the BIR model

Web and Semantic Web Query Languages

A number of techniques have been developed to facilitate powerful data retrieval on the Web and Semantic Web. Three categories of Web query languages can be distinguished, according to the format of the data they can retrieve: XML, RDF and Topic Maps. This article introduces the spectrum of languages falling into these categories and summarises their salient aspects. The languages are introduced using common sample data and query types. Key aspects of the query languages considered are stressed in a conclusion

Answering Conjunctive Queries under Updates

We consider the task of enumerating and counting answers to $k$-ary conjunctive queries against relational databases that may be updated by inserting or deleting tuples. We exhibit a new notion of q-hierarchical conjunctive queries and show that these can be maintained efficiently in the following sense. During a linear time preprocessing phase, we can build a data structure that enables constant delay enumeration of the query results; and when the database is updated, we can update the data structure and restart the enumeration phase within constant time. For the special case of self-join free conjunctive queries we obtain a dichotomy: if a query is not q-hierarchical, then query enumeration with sublinear$^\ast$ delay and sublinear update time (and arbitrary preprocessing time) is impossible. For answering Boolean conjunctive queries and for the more general problem of counting the number of solutions of k-ary queries we obtain complete dichotomies: if the query's homomorphic core is q-hierarchical, then size of the the query result can be computed in linear time and maintained with constant update time. Otherwise, the size of the query result cannot be maintained with sublinear update time. All our lower bounds rely on the OMv-conjecture, a conjecture on the hardness of online matrix-vector multiplication that has recently emerged in the field of fine-grained complexity to characterise the hardness of dynamic problems. The lower bound for the counting problem additionally relies on the orthogonal vectors conjecture, which in turn is implied by the strong exponential time hypothesis. $^\ast)$ By sublinear we mean $O(n^{1-\varepsilon})$ for some $\varepsilon>0$, where $n$ is the size of the active domain of the current database