Lattice gas with ``interaction potential''

We present an extension of a simple automaton model to incorporate non-local interactions extending over a spatial range in lattice gases. {}From the viewpoint of Statistical Mechanics, the lattice gas with interaction range may serve as a prototype for non-ideal gas behavior. {}From the density fluctuations correlation function, we obtain a quantity which is identified as a potential of mean force. Equilibrium and transport properties are computed theoretically and by numerical simulations to establish the validity of the model at macroscopic scale.Comment: 12 pages LaTeX, figures available on demand ([email protected]

Mesoscale fluid simulation with the Lattice Boltzmann method

PhDThis thesis describes investigations of several complex fluid effects., including hydrodynamic spinodal decomposition, viscous instability. and self-assembly of a cubic surfactant phase, by simulating them with a lattice Boltzmann computational model. The introduction describes what is meant by the term "complex fluid", and why such fluids are both important and difficult to understand. A key feature of complex fluids is that their behaviour spans length and time scales. The lattice Boltzmann method is presented as a modelling technique which sits at a "mesoscale" level intermediate between coarse-grained and fine-grained detail, and which is therefore ideal for modelling certain classes of complex fluids. The following chapters describe simulations which have been performed using this technique, in two and three dimensions. Chapter 2 presents an investigation into the separation of a mixture of two fluids. This process is found to involve several physical mechanisms at different stages. The simulated behaviour is found to be in good agreement with existing theory, and a curious effect, due to multiple competing mechanisms, is observed, in agreement with experiments and other simulations. Chapter 3 describes an improvement to lattice Boltzmann models of Hele-Shaw flow, along with simulations which quantitatively demonstrate improvements in both accuracy and numerical stability. The Saffman-Taylor hydrodynamic instability is demonstrated using this model. Chapter 4 contains the details and results of the TeraGyroid experiment, which involved extremely large-scale simulations to investigate the dynamical behaviour of a self-assembling structure. The first finite- size-effect- free dynamical simulations of such a system are presented. It is found that several different mechanisms are responsible for the assembly; the existence of chiral domains is demonstrated, along with an examination of domain growth during self-assembly. Appendix A describes some aspects of the implementation of the lattice Boltzmann codes used in this thesis; appendix B describes some of the Grid computing techniques which were necessary for the simulations of chapter 4. Chapter 5 summarises the work, and makes suggestions for further research and improvement.Huntsman Corporation Queen Mary University Schlumberger Cambridge Researc

Lattice Boltzmann methods for direct numerical simulation of turbulent fluid flows

We study the use of lattice Boltzmann (LB) methods for simulation of turbulent fluid flows motivated by their high computational throughput and amenability to highly parallel platforms such as graphics processing units (GPUs). Several algorithmic improvements are unearthed including work on non-unit Courant numbers, the force operator, use of alternative topologies based on face and body centered cubic lattices and a new formulation using a generalized eigendecomposition that allows a new freedom in tuning the eigenvectors of the linearised collision operator. Applications include a variable bulk viscosity and the use of a stretched grid, our implementation of which reduces errors present in previous efforts. We present details for numerous lattices including all required matrices, their moments the procedures and programs used to generate these and perform linear stability analysis. Small Mach number flows where density variations are negligible except in the buoyancy force term allow the use of a highly accurate finite volume solver to simulate the evolution of the buoyancy field which is coupled to the LB simulation as an external force. We use a multidimensional flux limited third order flux integral based advection scheme. The simplified algorithm we have devised is easier to implement, has higher performance and does not sacrifice any accuracy compared to the leading alternative. Our algorithm is particularly suited to an outflow based implementation which furthers the stated benefits. We present numerical experiments confirming the third order accuracy of our scheme when applied to multidimensional advection. The coupled solver is implemented in a new code that runs in parallel across multiple machines using GPUs. Our code achieves high computational throughput and accuracy and is used to simulate a range of turbulent flows. Details regarding turbulent channel flow and sheared convective boundary layer simulations are presented including some new insight into the scaling properties of the latter flow

The histological appearance of the proximal aspect of the dorsal condylar sagittal ridge of the third metacarpal and metatarsal bone in young Warmblood horses: normal appearance and correlation with detected radiographic variations

The objective of this study is to describe the normal histological appearance of the dorsoproximal aspect of the sagittal ridge of the third metacarpal/metatarsal bone in young Warmblood horses, and to compare it to the different radiographic variations (irregular, indentation, lucency, notch) described at this level. A total of 25 metacarpo/metatarsophalangeal joints of 12 Warmblood horses were used. Five samples of each radiographically described group were selected for histological processing. Each category was compared with the normal control group. Each group showed a bone cortex, covered by hyaline cartilage and longitudinally aligned collagen fibres covered by loosely organized connective tissue proximally. The normal and irregular group showed a smooth bone cortex. In the indentation and lucency group, a depression in the cortex was detected. The notch group presented an expansion of the cortex. The collagen fibres and connective tissue were located in the depression in the indentation group whereas the location varied in the lucency and notch group. The radiologic detected differences are translated into detectable histological differences. Further research is warranted to determine whether these variations are developmental or congenital and to evaluate their potential influence on the joint function during hyperextension

Microstructural development during the quenching and partitioning process in a newly designed low-carbon steel

This paper presents a detailed characterization of the microstructural development of a new quenching and partitioning (Q&P) steel. Q&P treatments, starting from full austenitization, were applied to the developed steel, leading to microstructures containing volume fractions of retained austenite of up to 0.15. The austenite was distributed as films in between the martensite laths. Analysis demonstrates that, in this material, stabilization of austenite can be achieved at significantly shorter time scales via the Q&P route than is possible via a bainitic isothermal holding. The results showed that the thermal stabilization of austenite during the partitioning step is not necessarily accompanied by a significant expansion of the material. This implies that the process of carbon partitioning from martensite to austenite occurs across low-mobility martensite–austenite interfaces. The amount of martensite formed during the first quench has been quantified. Unlike martensite formed in the final quench, this martensite was found to be tempered during partitioning. Measured volume fractions of retained austenite after different treatments were compared with simulations using model descriptions for carbon partitioning from martensite to austenite. Simulation results confirmed that the carbon partitioning takes place at low-mobility martensite–austenite interfaces.Green Open Access added to TU Delft Institutional Repository 'You share, we take care!' - Taverne project https://www.openaccess.nl/en/you-share-we-take-care Otherwise as indicated in the copyright section: the publisher is the copyright holder of this work and the author uses the Dutch legislation to make this work public.OLD Metals Processing, Microstructures and PropertiesOLD Surface and Interface Engineerin

SILAC-based proteome analysis of Starmerella bombicola sophorolipid production

Starmerella (Candida) bombicola is the biosurfactant-producing species that caught the greatest deal of attention in the academic and industrial world due to its ability of producing large amounts of sophorolipids. Despite its high economic potential, the biochemistry behind the sophorolipid biosynthesis is still poorly understood. Here we present the first proteomic characterization of S. bombicola for which we created a lys1 Delta. mutant to allow the use of SILAC for quantitative analysis. To characterize the processes behind the production of these biosurfactants, we compared the proteome of sophorolipid producing (early stationary phase) and nonproducing cells (exponential phase). We report the simultaneous production of all known enzymes involved in sophorolipid biosynthesis including a predicted sophorolipid transporter. In addition, we identified the heme binding protein Dap1 as a possible regulator for Cyp52M1. Our results further indicate that ammonium and phosphate limitation are not the sole limiting factors inducing sophorolipid biosynthesis