3,862 research outputs found
Inference with Constrained Hidden Markov Models in PRISM
A Hidden Markov Model (HMM) is a common statistical model which is widely
used for analysis of biological sequence data and other sequential phenomena.
In the present paper we show how HMMs can be extended with side-constraints and
present constraint solving techniques for efficient inference. Defining HMMs
with side-constraints in Constraint Logic Programming have advantages in terms
of more compact expression and pruning opportunities during inference.
We present a PRISM-based framework for extending HMMs with side-constraints
and show how well-known constraints such as cardinality and all different are
integrated. We experimentally validate our approach on the biologically
motivated problem of global pairwise alignment
QuantUM: Quantitative Safety Analysis of UML Models
When developing a safety-critical system it is essential to obtain an
assessment of different design alternatives. In particular, an early safety
assessment of the architectural design of a system is desirable. In spite of
the plethora of available formal quantitative analysis methods it is still
difficult for software and system architects to integrate these techniques into
their every day work. This is mainly due to the lack of methods that can be
directly applied to architecture level models, for instance given as UML
diagrams. Also, it is necessary that the description methods used do not
require a profound knowledge of formal methods. Our approach bridges this gap
and improves the integration of quantitative safety analysis methods into the
development process. All inputs of the analysis are specified at the level of a
UML model. This model is then automatically translated into the analysis model,
and the results of the analysis are consequently represented on the level of
the UML model. Thus the analysis model and the formal methods used during the
analysis are hidden from the user. We illustrate the usefulness of our approach
using an industrial strength case study.Comment: In Proceedings QAPL 2011, arXiv:1107.074
Probabilistic Programming Concepts
A multitude of different probabilistic programming languages exists today,
all extending a traditional programming language with primitives to support
modeling of complex, structured probability distributions. Each of these
languages employs its own probabilistic primitives, and comes with a particular
syntax, semantics and inference procedure. This makes it hard to understand the
underlying programming concepts and appreciate the differences between the
different languages. To obtain a better understanding of probabilistic
programming, we identify a number of core programming concepts underlying the
primitives used by various probabilistic languages, discuss the execution
mechanisms that they require and use these to position state-of-the-art
probabilistic languages and their implementation. While doing so, we focus on
probabilistic extensions of logic programming languages such as Prolog, which
have been developed since more than 20 years
Quantitative Verification: Formal Guarantees for Timeliness, Reliability and Performance
Computerised systems appear in almost all aspects of our daily lives, often in safety-critical scenarios such as embedded control systems in cars and aircraft
or medical devices such as pacemakers and sensors. We are thus increasingly reliant on these systems working correctly, despite often operating in unpredictable or unreliable environments. Designers of such devices need ways to guarantee that they will operate in a reliable and efficient manner.
Quantitative verification is a technique for analysing quantitative aspects of a system's design, such as timeliness, reliability or performance. It applies formal methods, based on a rigorous analysis of a mathematical model of the system, to automatically prove certain precisely specified properties, e.g. ``the airbag will always deploy within 20 milliseconds after a crash'' or ``the probability of both sensors failing simultaneously is less than 0.001''.
The ability to formally guarantee quantitative properties of this kind is beneficial across a wide range of application domains. For example, in safety-critical systems, it may be essential to establish credible bounds on the probability with which certain failures or combinations of failures can occur. In embedded control systems, it is often important to comply with strict constraints on timing or resources. More generally, being able to derive guarantees on precisely specified levels of performance or efficiency is a valuable tool in the design of, for example, wireless networking protocols, robotic systems or power management algorithms, to name but a few.
This report gives a short introduction to quantitative verification, focusing in particular on a widely used technique called model checking, and its generalisation to the analysis of quantitative aspects of a system such as timing, probabilistic behaviour or resource usage.
The intended audience is industrial designers and developers of systems such as those highlighted above who could benefit from the application of quantitative verification,but lack expertise in formal verification or modelling
Quantitative Safety: Linking Proof-Based Verification with Model Checking for Probabilistic Systems
This paper presents a novel approach for augmenting proof-based verification
with performance-style analysis of the kind employed in state-of-the-art model
checking tools for probabilistic systems. Quantitative safety properties
usually specified as probabilistic system invariants and modeled in proof-based
environments are evaluated using bounded model checking techniques.
Our specific contributions include the statement of a theorem that is central
to model checking safety properties of proof-based systems, the establishment
of a procedure; and its full implementation in a prototype system (YAGA) which
readily transforms a probabilistic model specified in a proof-based environment
to its equivalent verifiable PRISM model equipped with reward structures. The
reward structures capture the exact interpretation of the probabilistic
invariants and can reveal succinct information about the model during
experimental investigations. Finally, we demonstrate the novelty of the
technique on a probabilistic library case study
Formal Verification of Probabilistic SystemC Models with Statistical Model Checking
Transaction-level modeling with SystemC has been very successful in
describing the behavior of embedded systems by providing high-level executable
models, in which many of them have inherent probabilistic behaviors, e.g.,
random data and unreliable components. It thus is crucial to have both
quantitative and qualitative analysis of the probabilities of system
properties. Such analysis can be conducted by constructing a formal model of
the system under verification and using Probabilistic Model Checking (PMC).
However, this method is infeasible for large systems, due to the state space
explosion. In this article, we demonstrate the successful use of Statistical
Model Checking (SMC) to carry out such analysis directly from large SystemC
models and allow designers to express a wide range of useful properties. The
first contribution of this work is a framework to verify properties expressed
in Bounded Linear Temporal Logic (BLTL) for SystemC models with both timed and
probabilistic characteristics. Second, the framework allows users to expose a
rich set of user-code primitives as atomic propositions in BLTL. Moreover,
users can define their own fine-grained time resolution rather than the
boundary of clock cycles in the SystemC simulation. The third contribution is
an implementation of a statistical model checker. It contains an automatic
monitor generation for producing execution traces of the
model-under-verification (MUV), the mechanism for automatically instrumenting
the MUV, and the interaction with statistical model checking algorithms.Comment: Journal of Software: Evolution and Process. Wiley, 2017. arXiv admin
note: substantial text overlap with arXiv:1507.0818
Statistical Model Checking of e-Motions Domain-Specific Modeling Languages
Domain experts may use novel tools that allow them to de- sign and model their systems in a notation very close to the domain problem. However, the use of tools for the statistical analysis of stochas- tic systems requires software engineers to carefully specify such systems in low level and specific languages. In this work we line up both sce- narios, specific domain modeling and statistical analysis. Specifically, we have extended the e-Motions system, a framework to develop real-time domain-specific languages where the behavior is specified in a natural way by in-place transformation rules, to support the statistical analysis of systems defined using it. We discuss how restricted e-Motions sys- tems are used to produce Maude corresponding specifications, using a model transformation from e-Motions to Maude, which comply with the restrictions of the VeStA tool, and which can therefore be used to per- form statistical analysis on the stochastic systems thus generated. We illustrate our approach with a very simple messaging distributed system.Universidad de Málaga Campus de Excelencia Internacional AndalucÃa Tech. Research Project TIN2014-52034-R an
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